RNA–Protein interactions for RNA: ENST00000519770.1

IGHV3-52-201, Transcript of immunoglobulin heavy variable 3-52 (pseudogene), humanhuman

BASIC

Gene IGHV3-52, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-52-201ENST00000519770 MTMR2Q13614 643 aa20.4■□□□□ 0.86
IGHV3-52-201ENST00000519770 WASF1Q92558 559 aa20.4■□□□□ 0.86
IGHV3-52-201ENST00000519770 FRMPD2Q68DX3 1309 aaPredicted RBP20.39■□□□□ 0.85
IGHV3-52-201ENST00000519770 PTPDC1A2A3K4 754 aa20.39■□□□□ 0.85
IGHV3-52-201ENST00000519770 PALM3A6NDB9 673 aaPredicted RBP20.39■□□□□ 0.85
IGHV3-52-201ENST00000519770 SPDYE5A6NIY4 337 aa20.39■□□□□ 0.85
IGHV3-52-201ENST00000519770 IFNAR1P17181 557 aa20.39■□□□□ 0.85
IGHV3-52-201ENST00000519770 ZNF543Q08ER8 600 aa20.39■□□□□ 0.85
IGHV3-52-201ENST00000519770 TMTC3Q6ZXV5 915 aa20.39■□□□□ 0.85
IGHV3-52-201ENST00000519770 ZNF784Q8NCA9 323 aaPredicted RBP20.39■□□□□ 0.85
IGHV3-52-201ENST00000519770 OTUD5Q96G74 571 aa20.39■□□□□ 0.85
IGHV3-52-201ENST00000519770 CLMNQ96JQ2 1002 aa20.39■□□□□ 0.85
IGHV3-52-201ENST00000519770 GPCPD1Q9NPB8 672 aa20.39■□□□□ 0.85
IGHV3-52-201ENST00000519770 GOLGA8HP0CJ92 632 aa20.38■□□□□ 0.85
IGHV3-52-201ENST00000519770 SNHG28P0DPA3 235 aa20.38■□□□□ 0.85
IGHV3-52-201ENST00000519770 PDCP20941 246 aa20.38■□□□□ 0.85
IGHV3-52-201ENST00000519770 SMARCA1P28370 1054 aa20.38■□□□□ 0.85
IGHV3-52-201ENST00000519770 PPIL2Q13356 520 aa20.38■□□□□ 0.85
IGHV3-52-201ENST00000519770 SPICE1Q8N0Z3 855 aa20.38■□□□□ 0.85
IGHV3-52-201ENST00000519770 CCDC82Q8N4S0 544 aa20.38■□□□□ 0.85
IGHV3-52-201ENST00000519770 CHURC1Q8WUH1 139 aa20.38■□□□□ 0.85
IGHV3-52-201ENST00000519770 OPTNQ96CV9 577 aa20.38■□□□□ 0.85
IGHV3-52-201ENST00000519770 SLC26A6Q9BXS9 759 aa20.38■□□□□ 0.85
IGHV3-52-201ENST00000519770 MAD2L2Q9UI95 211 aa20.38■□□□□ 0.85
IGHV3-52-201ENST00000519770 AFG3L2Q9Y4W6 797 aa20.38■□□□□ 0.85
IGHV3-52-201ENST00000519770 CXCL11O14625 94 aa20.37■□□□□ 0.85
IGHV3-52-201ENST00000519770 WDR46O15213 610 aaKnown RBP20.37■□□□□ 0.85
IGHV3-52-201ENST00000519770 PDIA4P13667 645 aaKnown RBP20.37■□□□□ 0.85
IGHV3-52-201ENST00000519770 GJB2P29033 226 aa20.37■□□□□ 0.85
IGHV3-52-201ENST00000519770 HUNKP57058 714 aa20.37■□□□□ 0.85
IGHV3-52-201ENST00000519770 KCTD1Q719H9 257 aa20.37■□□□□ 0.85
IGHV3-52-201ENST00000519770 NSUN7Q8NE18 718 aaKnown RBP20.37■□□□□ 0.85
IGHV3-52-201ENST00000519770 DDX11Q96FC9 970 aa20.37■□□□□ 0.85
IGHV3-52-201ENST00000519770 FAM217BQ9NTX9 383 aaPredicted RBP20.37■□□□□ 0.85
IGHV3-52-201ENST00000519770 ORC3Q9UBD5 711 aaPredicted RBP20.37■□□□□ 0.85
IGHV3-52-201ENST00000519770 SEC63Q9UGP8 760 aaKnown RBP20.37■□□□□ 0.85
IGHV3-52-201ENST00000519770 FMNL1O95466 1100 aaPredicted RBP20.36■□□□□ 0.85
IGHV3-52-201ENST00000519770 FAM83BQ5T0W9 1011 aa20.36■□□□□ 0.85
IGHV3-52-201ENST00000519770 CST9Q5W186 159 aa20.36■□□□□ 0.85
IGHV3-52-201ENST00000519770 FAM160B2Q86V87 743 aa20.36■□□□□ 0.85
IGHV3-52-201ENST00000519770 STAG2Q8N3U4 1231 aa20.36■□□□□ 0.85
IGHV3-52-201ENST00000519770 RRP36Q96EU6 259 aaKnown RBP20.36■□□□□ 0.85
IGHV3-52-201ENST00000519770 RNF26Q9BY78 433 aaPredicted RBP20.36■□□□□ 0.85
IGHV3-52-201ENST00000519770 TRPM7Q96QT4 1865 aa20.36■□□□□ 0.85
IGHV3-52-201ENST00000519770 PASKQ96RG2 1323 aa20.35■□□□□ 0.85
IGHV3-52-201ENST00000519770 STK36Q9NRP7 1315 aa20.35■□□□□ 0.85
IGHV3-52-201ENST00000519770 TMEM232C9JQI7 657 aa20.35■□□□□ 0.85
IGHV3-52-201ENST00000519770 PLEKHA8P1O95397 391 aa20.35■□□□□ 0.85
IGHV3-52-201ENST00000519770 DEXIO95424 95 aa20.35■□□□□ 0.85
IGHV3-52-201ENST00000519770 XBP1P17861 261 aa20.35■□□□□ 0.85
IGHV3-52-201ENST00000519770 STAT2P52630 851 aa20.35■□□□□ 0.85
IGHV3-52-201ENST00000519770 HMGCS2P54868 508 aa20.35■□□□□ 0.85
IGHV3-52-201ENST00000519770 ST3GAL1Q11201 340 aa20.35■□□□□ 0.85
IGHV3-52-201ENST00000519770 TRIM29Q14134 588 aa20.35■□□□□ 0.85
IGHV3-52-201ENST00000519770 SMARCC2Q8TAQ2 1214 aa20.35■□□□□ 0.85
IGHV3-52-201ENST00000519770 PHKBQ93100 1093 aa20.35■□□□□ 0.85
IGHV3-52-201ENST00000519770 SPZ1Q9BXG8 430 aa20.35■□□□□ 0.85
IGHV3-52-201ENST00000519770 TANGO6Q9C0B7 1094 aa20.35■□□□□ 0.85
IGHV3-52-201ENST00000519770 FEM1BQ9UK73 627 aa20.35■□□□□ 0.85
IGHV3-52-201ENST00000519770 CTDP1Q9Y5B0 961 aaPredicted RBP20.35■□□□□ 0.85
IGHV3-52-201ENST00000519770 TMEM88BA6NKF7 163 aa20.34■□□□□ 0.85
IGHV3-52-201ENST00000519770 PRPF3O43395 683 aaKnown RBP20.34■□□□□ 0.85
IGHV3-52-201ENST00000519770 JAK2O60674 1132 aa20.34■□□□□ 0.85
IGHV3-52-201ENST00000519770 CTDNEP1O95476 244 aa20.34■□□□□ 0.85
IGHV3-52-201ENST00000519770 SNAPC2Q13487 334 aa20.34■□□□□ 0.85
IGHV3-52-201ENST00000519770 NTRK3Q16288 839 aa20.34■□□□□ 0.85
IGHV3-52-201ENST00000519770 FASTKD5Q7L8L6 764 aaKnown RBP20.34■□□□□ 0.85
IGHV3-52-201ENST00000519770 CMTR1Q8N1G2 835 aaKnown RBP20.34■□□□□ 0.85
IGHV3-52-201ENST00000519770 SRBD1Q8N5C6 995 aaKnown RBP20.34■□□□□ 0.85
IGHV3-52-201ENST00000519770 C12orf42Q96LP6 360 aa20.34■□□□□ 0.85
IGHV3-52-201ENST00000519770 NUP88Q99567 741 aaPredicted RBP20.34■□□□□ 0.85
IGHV3-52-201ENST00000519770 VAT1LQ9HCJ6 419 aa20.34■□□□□ 0.85
IGHV3-52-201ENST00000519770 ABT1Q9ULW3 272 aaKnown RBP20.34■□□□□ 0.85
IGHV3-52-201ENST00000519770 V9GY48 417 aaPredicted RBP20.34■□□□□ 0.85
IGHV3-52-201ENST00000519770 H3BQV1 296 aa20.33■□□□□ 0.85
IGHV3-52-201ENST00000519770 IRF6O14896 467 aa20.33■□□□□ 0.85
IGHV3-52-201ENST00000519770 PABPC4Q13310 644 aaKnown RBP eCLIP20.33■□□□□ 0.85
IGHV3-52-201ENST00000519770 SH3D19Q5HYK7 790 aa20.33■□□□□ 0.85
IGHV3-52-201ENST00000519770 IFFO2Q5TF58 517 aa20.33■□□□□ 0.85
IGHV3-52-201ENST00000519770 LARP1BQ659C4 914 aaKnown RBP20.33■□□□□ 0.85
IGHV3-52-201ENST00000519770 GADL1Q6ZQY3 521 aa20.33■□□□□ 0.85
IGHV3-52-201ENST00000519770 WNK4Q96J92 1243 aa20.33■□□□□ 0.85
IGHV3-52-201ENST00000519770 UBA5Q9GZZ9 404 aa20.33■□□□□ 0.85
IGHV3-52-201ENST00000519770 EMILIN3Q9NT22 766 aa20.33■□□□□ 0.85
IGHV3-52-201ENST00000519770 OTOFQ9HC10 1997 aa20.33■□□□□ 0.84
IGHV3-52-201ENST00000519770 PLA2G6O60733 806 aa20.32■□□□□ 0.84
IGHV3-52-201ENST00000519770 VCAM1P19320 739 aa20.32■□□□□ 0.84
IGHV3-52-201ENST00000519770 ZNF157P51786 506 aaPredicted RBP20.32■□□□□ 0.84
IGHV3-52-201ENST00000519770 GTF2A2P52657 109 aa20.32■□□□□ 0.84
IGHV3-52-201ENST00000519770 TRAF1Q13077 416 aa20.32■□□□□ 0.84
IGHV3-52-201ENST00000519770 SYDE2Q5VT97 1194 aa20.32■□□□□ 0.84
IGHV3-52-201ENST00000519770 PROCA1Q8NCQ7 364 aaPredicted RBP20.32■□□□□ 0.84
IGHV3-52-201ENST00000519770 CNKSR2Q8WXI2 1034 aa20.32■□□□□ 0.84
IGHV3-52-201ENST00000519770 PIBF1Q8WXW3 757 aa20.32■□□□□ 0.84
IGHV3-52-201ENST00000519770 RPAP3Q9H6T3 665 aaPredicted RBP20.32■□□□□ 0.84
IGHV3-52-201ENST00000519770 KCNH4Q9UQ05 1017 aa20.32■□□□□ 0.84
IGHV3-52-201ENST00000519770 CNTNAP5Q8WYK1 1306 aa20.31■□□□□ 0.84
IGHV3-52-201ENST00000519770 USP17L15C9J2P7 530 aa20.31■□□□□ 0.84
IGHV3-52-201ENST00000519770 USP17L13C9JLJ4 530 aa20.31■□□□□ 0.84
IGHV3-52-201ENST00000519770 USP17L11C9JVI0 530 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms