RNA–Protein interactions for RNA: ENST00000519132.5

CLK4-202, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-202ENST00000519132 BHMTQ93088 406 aa8.94□□□□□ -0.98
CLK4-202ENST00000519132 MAF1Q9H063 256 aa8.94□□□□□ -0.98
CLK4-202ENST00000519132 HDAC5Q9UQL6 1122 aa8.94□□□□□ -0.98
CLK4-202ENST00000519132 TECPR2O15040 1411 aa8.94□□□□□ -0.98
CLK4-202ENST00000519132 YTHDC2Q9H6S0 1430 aaKnown RBP8.94□□□□□ -0.98
CLK4-202ENST00000519132 CCDC7Q96M83 1385 aa8.94□□□□□ -0.98
CLK4-202ENST00000519132 FANCIQ9NVI1 1328 aa8.94□□□□□ -0.98
CLK4-202ENST00000519132 PIN1Q13526 163 aaPredicted RBP8.94□□□□□ -0.98
CLK4-202ENST00000519132 STAT4Q14765 748 aa8.94□□□□□ -0.98
CLK4-202ENST00000519132 SETDB1Q15047 1291 aa8.94□□□□□ -0.98
CLK4-202ENST00000519132 PPP1R14AQ96A00 147 aa8.94□□□□□ -0.98
CLK4-202ENST00000519132 CDH19Q9H159 772 aa8.94□□□□□ -0.98
CLK4-202ENST00000519132 SUCOQ9UBS9 1254 aaKnown RBP8.94□□□□□ -0.98
CLK4-202ENST00000519132 APEX2Q9UBZ4 518 aa8.94□□□□□ -0.98
CLK4-202ENST00000519132 CPS1P31327 1500 aa8.94□□□□□ -0.98
CLK4-202ENST00000519132 LTKP29376 864 aa8.94□□□□□ -0.98
CLK4-202ENST00000519132 CDC27P30260 824 aa8.94□□□□□ -0.98
CLK4-202ENST00000519132 LMOD3Q0VAK6 560 aa8.94□□□□□ -0.98
CLK4-202ENST00000519132 FAM9BQ8IZU0 186 aa8.94□□□□□ -0.98
CLK4-202ENST00000519132 RBBP8NLQ8NC74 664 aaPredicted RBP8.94□□□□□ -0.98
CLK4-202ENST00000519132 TESK2Q96S53 571 aa8.94□□□□□ -0.98
CLK4-202ENST00000519132 RHOBTB2Q9BYZ6 727 aa8.94□□□□□ -0.98
CLK4-202ENST00000519132 EHMT1Q9H9B1 1298 aa8.94□□□□□ -0.98
CLK4-202ENST00000519132 LAS1LQ9Y4W2 734 aaKnown RBP8.94□□□□□ -0.98
CLK4-202ENST00000519132 WASHC2AQ641Q2 1341 aa8.93□□□□□ -0.98
CLK4-202ENST00000519132 SPINT1O43278 529 aa8.93□□□□□ -0.98
CLK4-202ENST00000519132 DNAJC8O75937 253 aaPredicted RBP8.93□□□□□ -0.98
CLK4-202ENST00000519132 TP53P04637 393 aaPredicted RBP8.93□□□□□ -0.98
CLK4-202ENST00000519132 RPS26P62854 115 aaKnown RBP8.93□□□□□ -0.98
CLK4-202ENST00000519132 SAFB2Q14151 953 aaKnown RBP eCLIP8.93□□□□□ -0.98
CLK4-202ENST00000519132 NME8Q8N427 588 aa8.93□□□□□ -0.98
CLK4-202ENST00000519132 PMEPA1Q969W9 287 aa8.93□□□□□ -0.98
CLK4-202ENST00000519132 PKD2L1Q9P0L9 805 aa8.93□□□□□ -0.98
CLK4-202ENST00000519132 LRPPRCP42704 1394 aaKnown RBP8.93□□□□□ -0.98
CLK4-202ENST00000519132 A0A1W2PQU0 124 aa8.93□□□□□ -0.98
CLK4-202ENST00000519132 SOX5P35711 763 aa8.93□□□□□ -0.98
CLK4-202ENST00000519132 KCNC4Q03721 635 aa8.93□□□□□ -0.98
CLK4-202ENST00000519132 IP6K2Q9UHH9 426 aa8.93□□□□□ -0.98
CLK4-202ENST00000519132 ZNF180Q9UJW8 692 aa8.93□□□□□ -0.98
CLK4-202ENST00000519132 BMP1P13497 986 aa8.92□□□□□ -0.98
CLK4-202ENST00000519132 TRAPPC10P48553 1259 aa8.92□□□□□ -0.98
CLK4-202ENST00000519132 LLGL2Q6P1M3 1020 aa8.92□□□□□ -0.98
CLK4-202ENST00000519132 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.92□□□□□ -0.98
CLK4-202ENST00000519132 ABCC11Q96J66 1382 aa8.92□□□□□ -0.98
CLK4-202ENST00000519132 ALG1L2C9J202 215 aa8.92□□□□□ -0.98
CLK4-202ENST00000519132 KIF4AO95239 1232 aa8.92□□□□□ -0.98
CLK4-202ENST00000519132 CCINQ13939 588 aa8.92□□□□□ -0.98
CLK4-202ENST00000519132 SLC7A14Q8TBB6 771 aa8.92□□□□□ -0.98
CLK4-202ENST00000519132 SLC5A4Q9NY91 659 aa8.92□□□□□ -0.98
CLK4-202ENST00000519132 FAM50BQ9Y247 325 aa8.92□□□□□ -0.98
CLK4-202ENST00000519132 XRN1Q8IZH2 1706 aaKnown RBP8.92□□□□□ -0.98
CLK4-202ENST00000519132 PIK3R4Q99570 1358 aa8.92□□□□□ -0.98
CLK4-202ENST00000519132 CHD2O14647 1828 aaKnown RBP8.92□□□□□ -0.98
CLK4-202ENST00000519132 SPATA31C2B4DYI2 1134 aa8.91□□□□□ -0.98
CLK4-202ENST00000519132 MYBP10242 640 aa8.91□□□□□ -0.98
CLK4-202ENST00000519132 MLC1Q15049 377 aa8.91□□□□□ -0.98
CLK4-202ENST00000519132 SF1Q15637 639 aaKnown RBP8.91□□□□□ -0.98
CLK4-202ENST00000519132 CCSAPQ6IQ19 270 aaPredicted RBP8.91□□□□□ -0.98
CLK4-202ENST00000519132 CNTD1Q8N815 330 aa8.91□□□□□ -0.98
CLK4-202ENST00000519132 CDC6Q99741 560 aa8.91□□□□□ -0.98
CLK4-202ENST00000519132 KIF7Q2M1P5 1343 aa8.91□□□□□ -0.98
CLK4-202ENST00000519132 CAND2O75155 1236 aa8.91□□□□□ -0.98
CLK4-202ENST00000519132 RGS3P49796 1198 aa8.91□□□□□ -0.98
CLK4-202ENST00000519132 TBC1D8BQ0IIM8 1120 aa8.91□□□□□ -0.98
CLK4-202ENST00000519132 WIPI1Q5MNZ9 446 aaPredicted RBP8.91□□□□□ -0.98
CLK4-202ENST00000519132 DIEXFQ68CQ4 756 aaKnown RBP8.91□□□□□ -0.98
CLK4-202ENST00000519132 BHLHE41Q9C0J9 482 aaPredicted RBP8.91□□□□□ -0.98
CLK4-202ENST00000519132 LACRTQ9GZZ8 138 aa8.91□□□□□ -0.98
CLK4-202ENST00000519132 REV1Q9UBZ9 1251 aa8.91□□□□□ -0.98
CLK4-202ENST00000519132 FAM135BQ49AJ0 1406 aa8.91□□□□□ -0.98
CLK4-202ENST00000519132 PDE2AO00408 941 aaPredicted RBP8.91□□□□□ -0.98
CLK4-202ENST00000519132 NEMP1O14524 444 aa8.91□□□□□ -0.98
CLK4-202ENST00000519132 MYL1P05976 194 aa8.91□□□□□ -0.98
CLK4-202ENST00000519132 RAG1P15918 1043 aa8.91□□□□□ -0.98
CLK4-202ENST00000519132 IRX3P78415 501 aaPredicted RBP8.91□□□□□ -0.98
CLK4-202ENST00000519132 SV2CQ496J9 727 aa8.91□□□□□ -0.98
CLK4-202ENST00000519132 TMEM132EQ6IEE7 984 aa8.91□□□□□ -0.98
CLK4-202ENST00000519132 ANKLE2Q86XL3 938 aa8.91□□□□□ -0.98
CLK4-202ENST00000519132 PARD3BQ8TEW8 1205 aa8.91□□□□□ -0.98
CLK4-202ENST00000519132 TNPO3Q9Y5L0 923 aaKnown RBP8.91□□□□□ -0.98
CLK4-202ENST00000519132 CSADQ9Y600 493 aa8.91□□□□□ -0.98
CLK4-202ENST00000519132 CENPJQ9HC77 1338 aaPredicted RBP8.9□□□□□ -0.98
CLK4-202ENST00000519132 VN1R5Q7Z5H4 357 aa8.9□□□□□ -0.98
CLK4-202ENST00000519132 PLPPR2Q96GM1 343 aa8.9□□□□□ -0.98
CLK4-202ENST00000519132 METP08581 1390 aa8.9□□□□□ -0.98
CLK4-202ENST00000519132 MYOM1P52179 1685 aa8.9□□□□□ -0.98
CLK4-202ENST00000519132 GPC1P35052 558 aa8.9□□□□□ -0.98
CLK4-202ENST00000519132 PPP2R2AP63151 447 aa8.9□□□□□ -0.98
CLK4-202ENST00000519132 DHX32Q7L7V1 743 aaKnown RBP8.9□□□□□ -0.98
CLK4-202ENST00000519132 TMEM40Q8WWA1 233 aa8.9□□□□□ -0.98
CLK4-202ENST00000519132 SLC7A3Q8WY07 619 aa8.9□□□□□ -0.98
CLK4-202ENST00000519132 ATG4CQ96DT6 458 aa8.9□□□□□ -0.98
CLK4-202ENST00000519132 MTFR1LQ9H019 292 aa8.9□□□□□ -0.98
CLK4-202ENST00000519132 CRTAC1Q9NQ79 661 aa8.9□□□□□ -0.98
CLK4-202ENST00000519132 ROBO2Q9HCK4 1378 aa8.9□□□□□ -0.98
CLK4-202ENST00000519132 LMTK3Q96Q04 1460 aa8.9□□□□□ -0.99
CLK4-202ENST00000519132 A0A1B0GTH6 734 aa8.89□□□□□ -0.99
CLK4-202ENST00000519132 CD33P20138 364 aa8.89□□□□□ -0.99
CLK4-202ENST00000519132 TMF1P82094 1093 aa8.89□□□□□ -0.99
CLK4-202ENST00000519132 RPL6Q02878 288 aaKnown RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms