RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 NME1P15531 152 aaKnown RBP6.25□□□□□ -1.41
CTNNA1-212ENST00000518919 PPP2R1AP30153 589 aa6.25□□□□□ -1.41
CTNNA1-212ENST00000518919 AFF1P51825 1210 aaKnown RBP6.25□□□□□ -1.41
CTNNA1-212ENST00000518919 NLRP12P59046 1061 aa6.25□□□□□ -1.41
CTNNA1-212ENST00000518919 ZYXQ15942 572 aaKnown RBP6.25□□□□□ -1.41
CTNNA1-212ENST00000518919 KIF4BQ2VIQ3 1234 aa6.25□□□□□ -1.41
CTNNA1-212ENST00000518919 UNC5AQ6ZN44 842 aa6.25□□□□□ -1.41
CTNNA1-212ENST00000518919 C20orf204Q6ZNR8 217 aa6.25□□□□□ -1.41
CTNNA1-212ENST00000518919 ZNF669Q96BR6 464 aaPredicted RBP6.25□□□□□ -1.41
CTNNA1-212ENST00000518919 ATG4CQ96DT6 458 aa6.25□□□□□ -1.41
CTNNA1-212ENST00000518919 NUDCQ9Y266 331 aa6.25□□□□□ -1.41
CTNNA1-212ENST00000518919 KNSTRNQ9Y448 316 aa6.25□□□□□ -1.41
CTNNA1-212ENST00000518919 DLC1Q96QB1 1528 aa6.25□□□□□ -1.41
CTNNA1-212ENST00000518919 YTHDC2Q9H6S0 1430 aaKnown RBP6.25□□□□□ -1.41
CTNNA1-212ENST00000518919 RNF123Q5XPI4 1314 aa6.25□□□□□ -1.41
CTNNA1-212ENST00000518919 SLC22A31A6NKX4 558 aa6.24□□□□□ -1.41
CTNNA1-212ENST00000518919 TNFRSF10CO14798 259 aa6.24□□□□□ -1.41
CTNNA1-212ENST00000518919 DNAJA2O60884 412 aa6.24□□□□□ -1.41
CTNNA1-212ENST00000518919 ACRP10323 421 aa6.24□□□□□ -1.41
CTNNA1-212ENST00000518919 EPXP11678 715 aa6.24□□□□□ -1.41
CTNNA1-212ENST00000518919 GRK4P32298 578 aa6.24□□□□□ -1.41
CTNNA1-212ENST00000518919 GYS2P54840 703 aa6.24□□□□□ -1.41
CTNNA1-212ENST00000518919 ETF1P62495 437 aaKnown RBP6.24□□□□□ -1.41
CTNNA1-212ENST00000518919 IRX6P78412 446 aaPredicted RBP6.24□□□□□ -1.41
CTNNA1-212ENST00000518919 TCEA2Q15560 299 aa6.24□□□□□ -1.41
CTNNA1-212ENST00000518919 TKFCQ3LXA3 575 aa6.24□□□□□ -1.41
CTNNA1-212ENST00000518919 TMEM201Q5SNT2 666 aa6.24□□□□□ -1.41
CTNNA1-212ENST00000518919 CYFIP1Q7L576 1253 aa6.24□□□□□ -1.41
CTNNA1-212ENST00000518919 KLHL23Q8NBE8 558 aa6.24□□□□□ -1.41
CTNNA1-212ENST00000518919 ZSWIM2Q8NEG5 633 aa6.24□□□□□ -1.41
CTNNA1-212ENST00000518919 KLHDC7BQ96G42 594 aa6.24□□□□□ -1.41
CTNNA1-212ENST00000518919 IRX2Q9BZI1 471 aaPredicted RBP6.24□□□□□ -1.41
CTNNA1-212ENST00000518919 CNNM2Q9H8M5 875 aa6.24□□□□□ -1.41
CTNNA1-212ENST00000518919 PICK1Q9NRD5 415 aa6.24□□□□□ -1.41
CTNNA1-212ENST00000518919 ADAM30Q9UKF2 790 aa6.24□□□□□ -1.41
CTNNA1-212ENST00000518919 CSADQ9Y600 493 aa6.24□□□□□ -1.41
CTNNA1-212ENST00000518919 TNRQ92752 1358 aa6.23□□□□□ -1.41
CTNNA1-212ENST00000518919 LOC100289279A0A1B0GTE1 492 aa6.23□□□□□ -1.41
CTNNA1-212ENST00000518919 M0R082 166 aa6.23□□□□□ -1.41
CTNNA1-212ENST00000518919 RAG1P15918 1043 aa6.23□□□□□ -1.41
CTNNA1-212ENST00000518919 SUZ12Q15022 739 aaKnown RBP6.23□□□□□ -1.41
CTNNA1-212ENST00000518919 CDCP2Q5VXM1 449 aa6.23□□□□□ -1.41
CTNNA1-212ENST00000518919 MSL1Q68DK7 614 aa6.23□□□□□ -1.41
CTNNA1-212ENST00000518919 C12orf40Q86WS4 652 aa6.23□□□□□ -1.41
CTNNA1-212ENST00000518919 JMYQ8N9B5 988 aa6.23□□□□□ -1.41
CTNNA1-212ENST00000518919 ZNF417Q8TAU3 575 aa6.23□□□□□ -1.41
CTNNA1-212ENST00000518919 WDR89Q96FK6 387 aaPredicted RBP6.23□□□□□ -1.41
CTNNA1-212ENST00000518919 ZNF587Q96SQ5 575 aaPredicted RBP6.23□□□□□ -1.41
CTNNA1-212ENST00000518919 SLC9A7Q96T83 725 aa6.23□□□□□ -1.41
CTNNA1-212ENST00000518919 PCDHB10Q9UN67 800 aa6.23□□□□□ -1.41
CTNNA1-212ENST00000518919 LTBP3Q9NS15 1303 aa6.23□□□□□ -1.41
CTNNA1-212ENST00000518919 CD163L1Q9NR16 1453 aa6.22□□□□□ -1.41
CTNNA1-212ENST00000518919 ZMYM3Q14202 1370 aa6.22□□□□□ -1.41
CTNNA1-212ENST00000518919 ANKRD36BQ8N2N9 1353 aa6.22□□□□□ -1.41
CTNNA1-212ENST00000518919 SUSD5O60279 629 aa6.22□□□□□ -1.41
CTNNA1-212ENST00000518919 ASMTLO95671 621 aa6.22□□□□□ -1.41
CTNNA1-212ENST00000518919 SLC7A5Q01650 507 aa6.22□□□□□ -1.41
CTNNA1-212ENST00000518919 SLC10A6Q3KNW5 377 aa6.22□□□□□ -1.41
CTNNA1-212ENST00000518919 TMEM67Q5HYA8 995 aa6.22□□□□□ -1.41
CTNNA1-212ENST00000518919 INTS3Q68E01 1043 aaKnown RBP6.22□□□□□ -1.41
CTNNA1-212ENST00000518919 KIAA1211LQ6NV74 962 aa6.22□□□□□ -1.41
CTNNA1-212ENST00000518919 C8orf86Q6ZUL3 223 aa6.22□□□□□ -1.41
CTNNA1-212ENST00000518919 MAP4K3Q8IVH8 894 aa6.22□□□□□ -1.41
CTNNA1-212ENST00000518919 SYNPOQ8N3V7 929 aa6.22□□□□□ -1.41
CTNNA1-212ENST00000518919 GPR161Q8N6U8 529 aaKnown RBP6.22□□□□□ -1.41
CTNNA1-212ENST00000518919 FAM13CQ8NE31 585 aa6.22□□□□□ -1.41
CTNNA1-212ENST00000518919 WDR18Q9BV38 432 aa6.22□□□□□ -1.41
CTNNA1-212ENST00000518919 NLRP1Q9C000 1473 aa6.22□□□□□ -1.41
CTNNA1-212ENST00000518919 PLEKHH1Q9ULM0 1364 aa6.21□□□□□ -1.41
CTNNA1-212ENST00000518919 IQCA1LA6NCM1 817 aa6.21□□□□□ -1.42
CTNNA1-212ENST00000518919 SLFN14P0C7P3 912 aa6.21□□□□□ -1.42
CTNNA1-212ENST00000518919 POLR2BP30876 1174 aaKnown RBP6.21□□□□□ -1.42
CTNNA1-212ENST00000518919 SETDB1Q15047 1291 aa6.21□□□□□ -1.42
CTNNA1-212ENST00000518919 ZC3H12AQ5D1E8 599 aaKnown RBP6.21□□□□□ -1.42
CTNNA1-212ENST00000518919 CHSY3Q70JA7 882 aa6.21□□□□□ -1.42
CTNNA1-212ENST00000518919 LRRC47Q8N1G4 583 aaKnown RBP6.21□□□□□ -1.42
CTNNA1-212ENST00000518919 ACSF2Q96CM8 615 aaPredicted RBP6.21□□□□□ -1.42
CTNNA1-212ENST00000518919 SPATA9Q9BWV2 254 aa6.21□□□□□ -1.42
CTNNA1-212ENST00000518919 COL25A1Q9BXS0 654 aaPredicted RBP6.21□□□□□ -1.42
CTNNA1-212ENST00000518919 WNT10AQ9GZT5 417 aa6.21□□□□□ -1.42
CTNNA1-212ENST00000518919 EPN3Q9H201 632 aa6.21□□□□□ -1.42
CTNNA1-212ENST00000518919 SLC12A5Q9H2X9 1139 aa6.21□□□□□ -1.42
CTNNA1-212ENST00000518919 METTL14Q9HCE5 456 aaKnown RBP6.21□□□□□ -1.42
CTNNA1-212ENST00000518919 RAD18Q9NS91 495 aa6.21□□□□□ -1.42
CTNNA1-212ENST00000518919 NXF1Q9UBU9 619 aaKnown RBP6.21□□□□□ -1.42
CTNNA1-212ENST00000518919 PLAAQ9Y263 795 aa6.21□□□□□ -1.42
CTNNA1-212ENST00000518919 HIF3AQ9Y2N7 669 aa6.21□□□□□ -1.42
CTNNA1-212ENST00000518919 EVC2Q86UK5 1308 aa6.21□□□□□ -1.42
CTNNA1-212ENST00000518919 SHPRHQ149N8 1683 aa6.2□□□□□ -1.42
CTNNA1-212ENST00000518919 CPS1P31327 1500 aa6.2□□□□□ -1.42
CTNNA1-212ENST00000518919 A0A1W2PP64 1363 aa6.2□□□□□ -1.42
CTNNA1-212ENST00000518919 ABCC11Q96J66 1382 aa6.2□□□□□ -1.42
CTNNA1-212ENST00000518919 NINLQ9Y2I6 1382 aa6.2□□□□□ -1.42
CTNNA1-212ENST00000518919 KNDC1Q76NI1 1749 aa6.2□□□□□ -1.42
CTNNA1-212ENST00000518919 UBR1Q8IWV7 1749 aa6.2□□□□□ -1.42
CTNNA1-212ENST00000518919 TECPR2O15040 1411 aa6.2□□□□□ -1.42
CTNNA1-212ENST00000518919 CHURC1-FNTBB4DL54 471 aa6.2□□□□□ -1.42
CTNNA1-212ENST00000518919 DDX3YO15523 660 aaKnown RBP6.2□□□□□ -1.42
CTNNA1-212ENST00000518919 ADAM11O75078 769 aa6.2□□□□□ -1.42
CTNNA1-212ENST00000518919 AOC2O75106 756 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms