RNA–Protein interactions for RNA: ENST00000518916.5

MSC-AS1-204, MSC antisense RNA 1, humanhuman

TSL 3 BASIC

Gene MSC-AS1, Length 864 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSC-AS1-204ENST00000518916 TRIM29Q14134 588 aa17.1■□□□□ 0.33
MSC-AS1-204ENST00000518916 USP17L2Q6R6M4 530 aa17.1■□□□□ 0.33
MSC-AS1-204ENST00000518916 CCDC82Q8N4S0 544 aa17.1■□□□□ 0.33
MSC-AS1-204ENST00000518916 TMX2Q9Y320 296 aa17.1■□□□□ 0.33
MSC-AS1-204ENST00000518916 DTNBO60941 627 aa17.09■□□□□ 0.33
MSC-AS1-204ENST00000518916 PPFIA3O75145 1194 aa17.09■□□□□ 0.33
MSC-AS1-204ENST00000518916 ZNF543Q08ER8 600 aa17.09■□□□□ 0.33
MSC-AS1-204ENST00000518916 ARMC9Q7Z3E5 817 aa17.09■□□□□ 0.33
MSC-AS1-204ENST00000518916 SIAH1Q8IUQ4 282 aa17.09■□□□□ 0.33
MSC-AS1-204ENST00000518916 CMTR1Q8N1G2 835 aaKnown RBP17.09■□□□□ 0.33
MSC-AS1-204ENST00000518916 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.09■□□□□ 0.33
MSC-AS1-204ENST00000518916 GMCL1Q96IK5 515 aa17.09■□□□□ 0.33
MSC-AS1-204ENST00000518916 ALG1Q9BT22 464 aa17.09■□□□□ 0.33
MSC-AS1-204ENST00000518916 SPZ1Q9BXG8 430 aa17.09■□□□□ 0.33
MSC-AS1-204ENST00000518916 TLL2Q9Y6L7 1015 aa17.09■□□□□ 0.33
MSC-AS1-204ENST00000518916 FRMPD2Q68DX3 1309 aaPredicted RBP17.09■□□□□ 0.33
MSC-AS1-204ENST00000518916 F5H6K3 240 aa17.08■□□□□ 0.32
MSC-AS1-204ENST00000518916 PRPF3O43395 683 aaKnown RBP17.08■□□□□ 0.32
MSC-AS1-204ENST00000518916 USP2O75604 605 aaPredicted RBP17.08■□□□□ 0.32
MSC-AS1-204ENST00000518916 NDUFB10O96000 172 aa17.08■□□□□ 0.32
MSC-AS1-204ENST00000518916 GOLGA8HP0CJ92 632 aa17.08■□□□□ 0.32
MSC-AS1-204ENST00000518916 FDPSP14324 419 aaKnown RBP17.08■□□□□ 0.32
MSC-AS1-204ENST00000518916 XBP1P17861 261 aa17.08■□□□□ 0.32
MSC-AS1-204ENST00000518916 SMARCA1P28370 1054 aa17.08■□□□□ 0.32
MSC-AS1-204ENST00000518916 FOSBP53539 338 aa17.08■□□□□ 0.32
MSC-AS1-204ENST00000518916 MAP3K9P80192 1104 aa17.08■□□□□ 0.32
MSC-AS1-204ENST00000518916 FMR1Q06787 632 aaKnown RBP eCLIP17.08■□□□□ 0.32
MSC-AS1-204ENST00000518916 KLRC3Q07444 240 aa17.08■□□□□ 0.32
MSC-AS1-204ENST00000518916 DEFB115Q30KQ5 88 aa17.08■□□□□ 0.32
MSC-AS1-204ENST00000518916 NBPF11Q86T75 865 aa17.08■□□□□ 0.32
MSC-AS1-204ENST00000518916 STAG2Q8N3U4 1231 aa17.08■□□□□ 0.32
MSC-AS1-204ENST00000518916 SRBD1Q8N5C6 995 aaKnown RBP17.08■□□□□ 0.32
MSC-AS1-204ENST00000518916 ACER1Q8TDN7 264 aa17.08■□□□□ 0.32
MSC-AS1-204ENST00000518916 ZKSCAN4Q969J2 545 aaPredicted RBP17.08■□□□□ 0.32
MSC-AS1-204ENST00000518916 C8orf76Q96K31 380 aa17.08■□□□□ 0.32
MSC-AS1-204ENST00000518916 GPCPD1Q9NPB8 672 aa17.08■□□□□ 0.32
MSC-AS1-204ENST00000518916 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.08■□□□□ 0.32
MSC-AS1-204ENST00000518916 A0A1W2PRG0 241 aa17.07■□□□□ 0.32
MSC-AS1-204ENST00000518916 ZSCAN22P10073 491 aaPredicted RBP17.07■□□□□ 0.32
MSC-AS1-204ENST00000518916 ECE1P42892 770 aa17.07■□□□□ 0.32
MSC-AS1-204ENST00000518916 USP14P54578 494 aa17.07■□□□□ 0.32
MSC-AS1-204ENST00000518916 FUT2Q10981 343 aa17.07■□□□□ 0.32
MSC-AS1-204ENST00000518916 IKQ13123 557 aaPredicted RBP17.07■□□□□ 0.32
MSC-AS1-204ENST00000518916 ZYXQ15942 572 aaKnown RBP17.07■□□□□ 0.32
MSC-AS1-204ENST00000518916 RASGRP2Q7LDG7 609 aa17.07■□□□□ 0.32
MSC-AS1-204ENST00000518916 SAPCD2Q86UD0 394 aa17.07■□□□□ 0.32
MSC-AS1-204ENST00000518916 RRP36Q96EU6 259 aaKnown RBP17.07■□□□□ 0.32
MSC-AS1-204ENST00000518916 KIAA1683Q9H0B3 1180 aa17.07■□□□□ 0.32
MSC-AS1-204ENST00000518916 VCPKMTQ9H867 229 aa17.07■□□□□ 0.32
MSC-AS1-204ENST00000518916 SEC63Q9UGP8 760 aaKnown RBP17.07■□□□□ 0.32
MSC-AS1-204ENST00000518916 FZD1Q9UP38 647 aa17.07■□□□□ 0.32
MSC-AS1-204ENST00000518916 BRD1O95696 1058 aa17.06■□□□□ 0.32
MSC-AS1-204ENST00000518916 BMP3P12645 472 aa17.06■□□□□ 0.32
MSC-AS1-204ENST00000518916 PTPRAP18433 802 aa17.06■□□□□ 0.32
MSC-AS1-204ENST00000518916 VEGFBP49765 207 aa17.06■□□□□ 0.32
MSC-AS1-204ENST00000518916 PKP1Q13835 747 aa17.06■□□□□ 0.32
MSC-AS1-204ENST00000518916 VGLL4Q14135 290 aa17.06■□□□□ 0.32
MSC-AS1-204ENST00000518916 DLK2Q6UY11 383 aa17.06■□□□□ 0.32
MSC-AS1-204ENST00000518916 CCDC84Q86UT8 332 aaPredicted RBP17.06■□□□□ 0.32
MSC-AS1-204ENST00000518916 ANKRD13AQ8IZ07 590 aa17.06■□□□□ 0.32
MSC-AS1-204ENST00000518916 RGS22Q8NE09 1264 aa17.06■□□□□ 0.32
MSC-AS1-204ENST00000518916 LPAR1Q92633 364 aa17.06■□□□□ 0.32
MSC-AS1-204ENST00000518916 WDR18Q9BV38 432 aa17.06■□□□□ 0.32
MSC-AS1-204ENST00000518916 ZNF408Q9H9D4 720 aa17.06■□□□□ 0.32
MSC-AS1-204ENST00000518916 V9GY48 417 aaPredicted RBP17.06■□□□□ 0.32
MSC-AS1-204ENST00000518916 CELF2O95319 508 aaKnown RBP17.05■□□□□ 0.32
MSC-AS1-204ENST00000518916 FOXD4L5Q5VV16 416 aaPredicted RBP17.05■□□□□ 0.32
MSC-AS1-204ENST00000518916 KCTD1Q719H9 257 aa17.05■□□□□ 0.32
MSC-AS1-204ENST00000518916 SPICE1Q8N0Z3 855 aa17.05■□□□□ 0.32
MSC-AS1-204ENST00000518916 ZNF280CQ8ND82 737 aa17.05■□□□□ 0.32
MSC-AS1-204ENST00000518916 FOXD4L4Q8WXT5 416 aaPredicted RBP17.05■□□□□ 0.32
MSC-AS1-204ENST00000518916 PIBF1Q8WXW3 757 aa17.05■□□□□ 0.32
MSC-AS1-204ENST00000518916 MTMR6Q9Y217 621 aa17.05■□□□□ 0.32
MSC-AS1-204ENST00000518916 ATP6V1DQ9Y5K8 247 aa17.05■□□□□ 0.32
MSC-AS1-204ENST00000518916 PHIPQ8WWQ0 1821 aa17.05■□□□□ 0.32
MSC-AS1-204ENST00000518916 THSD7BQ9C0I4 1608 aa17.04■□□□□ 0.32
MSC-AS1-204ENST00000518916 USP17L10C9JJH3 530 aa17.04■□□□□ 0.32
MSC-AS1-204ENST00000518916 SCG2P13521 617 aa17.04■□□□□ 0.32
MSC-AS1-204ENST00000518916 MTMR2Q13614 643 aa17.04■□□□□ 0.32
MSC-AS1-204ENST00000518916 MAP3K11Q16584 847 aa17.04■□□□□ 0.32
MSC-AS1-204ENST00000518916 SNCAIPQ9Y6H5 919 aa17.04■□□□□ 0.32
MSC-AS1-204ENST00000518916 ZHX2Q9Y6X8 837 aa17.04■□□□□ 0.32
MSC-AS1-204ENST00000518916 hCG_1642624A0A1W2PR95 340 aa17.03■□□□□ 0.32
MSC-AS1-204ENST00000518916 TRIM75PA6NK02 468 aa17.03■□□□□ 0.32
MSC-AS1-204ENST00000518916 WDR46O15213 610 aaKnown RBP17.03■□□□□ 0.32
MSC-AS1-204ENST00000518916 F13A1P00488 732 aa17.03■□□□□ 0.32
MSC-AS1-204ENST00000518916 STAT2P52630 851 aa17.03■□□□□ 0.32
MSC-AS1-204ENST00000518916 FKBP1BP68106 108 aa17.03■□□□□ 0.32
MSC-AS1-204ENST00000518916 GUCY1B3Q02153 619 aa17.03■□□□□ 0.32
MSC-AS1-204ENST00000518916 SPP2Q13103 211 aa17.03■□□□□ 0.32
MSC-AS1-204ENST00000518916 GNL2Q13823 731 aaKnown RBP17.03■□□□□ 0.32
MSC-AS1-204ENST00000518916 SAFBQ15424 915 aaKnown RBP eCLIP17.03■□□□□ 0.32
MSC-AS1-204ENST00000518916 PFKFB3Q16875 520 aaPredicted RBP17.03■□□□□ 0.32
MSC-AS1-204ENST00000518916 FAM83BQ5T0W9 1011 aa17.03■□□□□ 0.32
MSC-AS1-204ENST00000518916 MCTP1Q6DN14 999 aa17.03■□□□□ 0.32
MSC-AS1-204ENST00000518916 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.03■□□□□ 0.32
MSC-AS1-204ENST00000518916 HOMER1Q86YM7 354 aa17.03■□□□□ 0.32
MSC-AS1-204ENST00000518916 FBXO18Q8NFZ0 1043 aa17.03■□□□□ 0.32
MSC-AS1-204ENST00000518916 AIFM3Q96NN9 605 aa17.03■□□□□ 0.32
MSC-AS1-204ENST00000518916 GBP4Q96PP9 640 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms