RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 A0A087WZG4 1122 aa5.72□□□□□ -1.49
VPS13B-207ENST00000518569 U2SURPO15042 1029 aaKnown RBP5.72□□□□□ -1.49
VPS13B-207ENST00000518569 TCEAL1Q15170 157 aa5.72□□□□□ -1.49
VPS13B-207ENST00000518569 DDR2Q16832 855 aa5.72□□□□□ -1.49
VPS13B-207ENST00000518569 AXDND1Q5T1B0 1012 aaPredicted RBP5.72□□□□□ -1.49
VPS13B-207ENST00000518569 KIAA1211LQ6NV74 962 aa5.72□□□□□ -1.49
VPS13B-207ENST00000518569 LRP10Q7Z4F1 713 aa5.72□□□□□ -1.49
VPS13B-207ENST00000518569 CELF2-AS1Q8N7Q2 184 aa5.72□□□□□ -1.49
VPS13B-207ENST00000518569 ASB11Q8WXH4 323 aa5.72□□□□□ -1.49
VPS13B-207ENST00000518569 MKL1Q969V6 931 aa5.72□□□□□ -1.49
VPS13B-207ENST00000518569 HSPA12BQ96MM6 686 aa5.72□□□□□ -1.49
VPS13B-207ENST00000518569 PRDM14Q9GZV8 571 aa5.72□□□□□ -1.49
VPS13B-207ENST00000518569 DUSP15Q9H1R2 295 aaPredicted RBP5.72□□□□□ -1.49
VPS13B-207ENST00000518569 GOLGA2P5Q9HBQ8 144 aa5.72□□□□□ -1.49
VPS13B-207ENST00000518569 SEMA3GQ9NS98 782 aa5.72□□□□□ -1.49
VPS13B-207ENST00000518569 PCDHB10Q9UN67 800 aa5.72□□□□□ -1.49
VPS13B-207ENST00000518569 OAS3Q9Y6K5 1087 aaKnown RBP5.72□□□□□ -1.49
VPS13B-207ENST00000518569 PITPNM2Q9BZ72 1349 aa5.72□□□□□ -1.49
VPS13B-207ENST00000518569 ANKRD34BA5PLL1 514 aa5.71□□□□□ -1.5
VPS13B-207ENST00000518569 SHOXO15266 292 aa5.71□□□□□ -1.5
VPS13B-207ENST00000518569 SIGLEC6O43699 453 aa5.71□□□□□ -1.5
VPS13B-207ENST00000518569 TP53P04637 393 aaPredicted RBP5.71□□□□□ -1.5
VPS13B-207ENST00000518569 NAT2P11245 290 aa5.71□□□□□ -1.5
VPS13B-207ENST00000518569 CD247P20963 164 aa5.71□□□□□ -1.5
VPS13B-207ENST00000518569 NMIQ13287 307 aaPredicted RBP5.71□□□□□ -1.5
VPS13B-207ENST00000518569 SERINC3Q13530 473 aa5.71□□□□□ -1.5
VPS13B-207ENST00000518569 TDRD10Q5VZ19 366 aaKnown RBP5.71□□□□□ -1.5
VPS13B-207ENST00000518569 C6orf15Q6UXA7 325 aaPredicted RBP5.71□□□□□ -1.5
VPS13B-207ENST00000518569 TMPRSS7Q7RTY8 843 aa5.71□□□□□ -1.5
VPS13B-207ENST00000518569 VSIG10LQ86VR7 867 aa5.71□□□□□ -1.5
VPS13B-207ENST00000518569 DAGLBQ8NCG7 672 aa5.71□□□□□ -1.5
VPS13B-207ENST00000518569 SYTL5Q8TDW5 730 aaPredicted RBP5.71□□□□□ -1.5
VPS13B-207ENST00000518569 HAUS7Q99871 368 aa5.71□□□□□ -1.5
VPS13B-207ENST00000518569 CCDC113Q9H0I3 377 aa5.71□□□□□ -1.5
VPS13B-207ENST00000518569 FBXL21Q9UKT6 434 aa5.71□□□□□ -1.5
VPS13B-207ENST00000518569 MSRB2Q9Y3D2 182 aa5.71□□□□□ -1.5
VPS13B-207ENST00000518569 BTBD11A6QL63 1104 aa5.7□□□□□ -1.5
VPS13B-207ENST00000518569 CBFA2T2O43439 604 aa5.7□□□□□ -1.5
VPS13B-207ENST00000518569 DDAH1O94760 285 aa5.7□□□□□ -1.5
VPS13B-207ENST00000518569 TAL1P17542 331 aaPredicted RBP5.7□□□□□ -1.5
VPS13B-207ENST00000518569 TXKP42681 527 aa5.7□□□□□ -1.5
VPS13B-207ENST00000518569 AOC3Q16853 763 aa5.7□□□□□ -1.5
VPS13B-207ENST00000518569 CDKAL1Q5VV42 579 aa5.7□□□□□ -1.5
VPS13B-207ENST00000518569 DCAF15Q66K64 600 aa5.7□□□□□ -1.5
VPS13B-207ENST00000518569 HEATR6Q6AI08 1181 aaKnown RBP5.7□□□□□ -1.5
VPS13B-207ENST00000518569 TSPYL5Q86VY4 417 aaPredicted RBP5.7□□□□□ -1.5
VPS13B-207ENST00000518569 ZNF655Q8N720 491 aaPredicted RBP5.7□□□□□ -1.5
VPS13B-207ENST00000518569 MICAL1Q8TDZ2 1067 aa5.7□□□□□ -1.5
VPS13B-207ENST00000518569 BCL7CQ8WUZ0 217 aaPredicted RBP5.7□□□□□ -1.5
VPS13B-207ENST00000518569 DNAJC2Q99543 621 aaKnown RBP5.7□□□□□ -1.5
VPS13B-207ENST00000518569 HDAC8Q9BY41 377 aa5.7□□□□□ -1.5
VPS13B-207ENST00000518569 KLHL25Q9H0H3 589 aa5.7□□□□□ -1.5
VPS13B-207ENST00000518569 GBP3Q9H0R5 595 aa5.7□□□□□ -1.5
VPS13B-207ENST00000518569 EPN3Q9H201 632 aa5.7□□□□□ -1.5
VPS13B-207ENST00000518569 GP6Q9HCN6 339 aa5.7□□□□□ -1.5
VPS13B-207ENST00000518569 WHRNQ9P202 907 aa5.7□□□□□ -1.5
VPS13B-207ENST00000518569 USP35Q9P2H5 1018 aa5.7□□□□□ -1.5
VPS13B-207ENST00000518569 SLC5A6Q9Y289 635 aa5.7□□□□□ -1.5
VPS13B-207ENST00000518569 ZNF451Q9Y4E5 1061 aa5.7□□□□□ -1.5
VPS13B-207ENST00000518569 FHOD1Q9Y613 1164 aa5.7□□□□□ -1.5
VPS13B-207ENST00000518569 H3BS24 57 aa5.69□□□□□ -1.5
VPS13B-207ENST00000518569 GJB6O95452 261 aa5.69□□□□□ -1.5
VPS13B-207ENST00000518569 ITGA4P13612 1032 aa5.69□□□□□ -1.5
VPS13B-207ENST00000518569 SNW1Q13573 536 aaKnown RBP5.69□□□□□ -1.5
VPS13B-207ENST00000518569 CLEC16AQ2KHT3 1053 aa5.69□□□□□ -1.5
VPS13B-207ENST00000518569 GAB4Q2WGN9 574 aa5.69□□□□□ -1.5
VPS13B-207ENST00000518569 EEPD1Q7L9B9 569 aa5.69□□□□□ -1.5
VPS13B-207ENST00000518569 TMC3Q7Z5M5 1100 aa5.69□□□□□ -1.5
VPS13B-207ENST00000518569 UBE2FQ969M7 185 aa5.69□□□□□ -1.5
VPS13B-207ENST00000518569 ZNF669Q96BR6 464 aaPredicted RBP5.69□□□□□ -1.5
VPS13B-207ENST00000518569 APBA2Q99767 749 aa5.69□□□□□ -1.5
VPS13B-207ENST00000518569 ST7Q9NRC1 585 aa5.69□□□□□ -1.5
VPS13B-207ENST00000518569 CHST7Q9NS84 486 aa5.69□□□□□ -1.5
VPS13B-207ENST00000518569 LMCD1Q9NZU5 365 aa5.69□□□□□ -1.5
VPS13B-207ENST00000518569 ZSWIM5Q9P217 1185 aa5.69□□□□□ -1.5
VPS13B-207ENST00000518569 CCDC39Q9UFE4 941 aa5.69□□□□□ -1.5
VPS13B-207ENST00000518569 SUSD2Q9UGT4 822 aa5.69□□□□□ -1.5
VPS13B-207ENST00000518569 DIS3Q9Y2L1 958 aaKnown RBP5.69□□□□□ -1.5
VPS13B-207ENST00000518569 SHISA3A0PJX4 238 aa5.68□□□□□ -1.5
VPS13B-207ENST00000518569 B2RBV5 119 aa5.68□□□□□ -1.5
VPS13B-207ENST00000518569 PPM1BO75688 479 aa5.68□□□□□ -1.5
VPS13B-207ENST00000518569 PRAMEF1O95521 474 aa5.68□□□□□ -1.5
VPS13B-207ENST00000518569 WNT11O96014 354 aa5.68□□□□□ -1.5
VPS13B-207ENST00000518569 EPHX1P07099 455 aa5.68□□□□□ -1.5
VPS13B-207ENST00000518569 TPP2P29144 1249 aaPredicted RBP5.68□□□□□ -1.5
VPS13B-207ENST00000518569 ZNF445P59923 1031 aa5.68□□□□□ -1.5
VPS13B-207ENST00000518569 NOL9Q5SY16 702 aaKnown RBP5.68□□□□□ -1.5
VPS13B-207ENST00000518569 MRM1Q6IN84 353 aaKnown RBP5.68□□□□□ -1.5
VPS13B-207ENST00000518569 ST13P5Q8NFI4 369 aaPredicted RBP5.68□□□□□ -1.5
VPS13B-207ENST00000518569 PMFBP1Q8TBY8 1022 aa5.68□□□□□ -1.5
VPS13B-207ENST00000518569 RCC1LQ96I51 464 aaKnown RBP5.68□□□□□ -1.5
VPS13B-207ENST00000518569 OSBPL2Q9H1P3 480 aa5.68□□□□□ -1.5
VPS13B-207ENST00000518569 GFOD1Q9NXC2 390 aa5.68□□□□□ -1.5
VPS13B-207ENST00000518569 RNF114Q9Y508 228 aa5.68□□□□□ -1.5
VPS13B-207ENST00000518569 RBAK-RBAKDNI3L0D1 243 aa5.67□□□□□ -1.5
VPS13B-207ENST00000518569 SUSD5O60279 629 aa5.67□□□□□ -1.5
VPS13B-207ENST00000518569 GSNP06396 782 aa5.67□□□□□ -1.5
VPS13B-207ENST00000518569 RASGRF1Q13972 1273 aa5.67□□□□□ -1.5
VPS13B-207ENST00000518569 NFE2L2Q16236 605 aa5.67□□□□□ -1.5
VPS13B-207ENST00000518569 ZNF513Q8N8E2 541 aaPredicted RBP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms