RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 PRMT2P55345 433 aa25.89■■□□□ 1.74
VEGFA-217ENST00000518538 NECTIN1Q15223 517 aa25.89■■□□□ 1.74
VEGFA-217ENST00000518538 RCSD1Q6JBY9 416 aa25.89■■□□□ 1.74
VEGFA-217ENST00000518538 DGKHQ86XP1 1220 aa25.89■■□□□ 1.74
VEGFA-217ENST00000518538 MB21D1Q8N884 522 aa25.89■■□□□ 1.74
VEGFA-217ENST00000518538 TMEM47Q9BQJ4 181 aa25.89■■□□□ 1.74
VEGFA-217ENST00000518538 ZKSCAN3Q9BRR0 538 aa25.89■■□□□ 1.74
VEGFA-217ENST00000518538 FBXO28Q9NVF7 368 aa25.89■■□□□ 1.74
VEGFA-217ENST00000518538 PPP1R9AQ9ULJ8 1098 aa25.89■■□□□ 1.74
VEGFA-217ENST00000518538 TAF6LQ9Y6J9 622 aa25.89■■□□□ 1.74
VEGFA-217ENST00000518538 A0A0G2JMZ2 1700 aa25.88■■□□□ 1.73
VEGFA-217ENST00000518538 PARP14Q460N5 1801 aa25.88■■□□□ 1.73
VEGFA-217ENST00000518538 MGAMO43451 1857 aa25.88■■□□□ 1.73
VEGFA-217ENST00000518538 Q3C1V9 767 aa25.88■■□□□ 1.73
VEGFA-217ENST00000518538 ATG4CQ96DT6 458 aa25.88■■□□□ 1.73
VEGFA-217ENST00000518538 ZSCAN10Q96SZ4 725 aaPredicted RBP25.88■■□□□ 1.73
VEGFA-217ENST00000518538 BTBD7Q9P203 1132 aa25.88■■□□□ 1.73
VEGFA-217ENST00000518538 SRRDQ9UH36 339 aa25.88■■□□□ 1.73
VEGFA-217ENST00000518538 ADAMTS5Q9UNA0 930 aa25.88■■□□□ 1.73
VEGFA-217ENST00000518538 TNPO2O14787 897 aaKnown RBP25.87■■□□□ 1.73
VEGFA-217ENST00000518538 SLC27A2O14975 620 aa25.87■■□□□ 1.73
VEGFA-217ENST00000518538 BMP3P12645 472 aa25.87■■□□□ 1.73
VEGFA-217ENST00000518538 SLC1A4P43007 532 aa25.87■■□□□ 1.73
VEGFA-217ENST00000518538 CCNA1P78396 465 aa25.87■■□□□ 1.73
VEGFA-217ENST00000518538 CREB3L3Q68CJ9 461 aa25.87■■□□□ 1.73
VEGFA-217ENST00000518538 STOX1Q6ZVD7 989 aa25.87■■□□□ 1.73
VEGFA-217ENST00000518538 RALYLQ86SE5 291 aaKnown RBP25.87■■□□□ 1.73
VEGFA-217ENST00000518538 NCOA7Q8NI08 942 aa25.87■■□□□ 1.73
VEGFA-217ENST00000518538 ABHD8Q96I13 439 aa25.87■■□□□ 1.73
VEGFA-217ENST00000518538 SLF1Q9BQI6 1058 aa25.87■■□□□ 1.73
VEGFA-217ENST00000518538 MCCP23508 829 aa25.86■■□□□ 1.73
VEGFA-217ENST00000518538 SAMD1Q6SPF0 538 aaPredicted RBP25.86■■□□□ 1.73
VEGFA-217ENST00000518538 CYB5R4Q7L1T6 521 aa25.86■■□□□ 1.73
VEGFA-217ENST00000518538 ANKS1AQ92625 1134 aa25.86■■□□□ 1.73
VEGFA-217ENST00000518538 COA7Q96BR5 231 aa25.86■■□□□ 1.73
VEGFA-217ENST00000518538 UBAC1Q9BSL1 405 aa25.86■■□□□ 1.73
VEGFA-217ENST00000518538 FEM1BQ9UK73 627 aa25.86■■□□□ 1.73
VEGFA-217ENST00000518538 TNKSO95271 1327 aa25.86■■□□□ 1.73
VEGFA-217ENST00000518538 MAPK4P31152 587 aa25.85■■□□□ 1.73
VEGFA-217ENST00000518538 ENAHQ8N8S7 591 aaPredicted RBP25.85■■□□□ 1.73
VEGFA-217ENST00000518538 PRPF38AQ8NAV1 312 aaKnown RBP25.85■■□□□ 1.73
VEGFA-217ENST00000518538 DCAF4Q8WV16 495 aa25.85■■□□□ 1.73
VEGFA-217ENST00000518538 HPS5Q9UPZ3 1129 aa25.85■■□□□ 1.73
VEGFA-217ENST00000518538 VWA5AO00534 786 aa25.84■■□□□ 1.73
VEGFA-217ENST00000518538 PRKCZQ05513 592 aa25.84■■□□□ 1.73
VEGFA-217ENST00000518538 RNF20Q5VTR2 975 aa25.84■■□□□ 1.73
VEGFA-217ENST00000518538 CCAR1Q8IX12 1150 aaKnown RBP25.84■■□□□ 1.73
VEGFA-217ENST00000518538 PORCNQ9H237 461 aa25.84■■□□□ 1.73
VEGFA-217ENST00000518538 PTCH2Q9Y6C5 1203 aa25.84■■□□□ 1.73
VEGFA-217ENST00000518538 REC8O95072 547 aa25.83■■□□□ 1.73
VEGFA-217ENST00000518538 STAT2P52630 851 aa25.83■■□□□ 1.73
VEGFA-217ENST00000518538 SPATC1LQ9H0A9 340 aa25.83■■□□□ 1.73
VEGFA-217ENST00000518538 ISY1Q9ULR0 285 aaKnown RBP25.83■■□□□ 1.73
VEGFA-217ENST00000518538 MTMR7Q9Y216 660 aa25.83■■□□□ 1.73
VEGFA-217ENST00000518538 TMEM232C9JQI7 657 aa25.82■■□□□ 1.72
VEGFA-217ENST00000518538 PLA2G6O60733 806 aa25.82■■□□□ 1.72
VEGFA-217ENST00000518538 PDHBP11177 359 aa25.82■■□□□ 1.72
VEGFA-217ENST00000518538 RASGRP2Q7LDG7 609 aa25.82■■□□□ 1.72
VEGFA-217ENST00000518538 FAM160B2Q86V87 743 aa25.82■■□□□ 1.72
VEGFA-217ENST00000518538 MB21D2Q8IYB1 491 aaPredicted RBP25.82■■□□□ 1.72
VEGFA-217ENST00000518538 CHURC1Q8WUH1 139 aa25.82■■□□□ 1.72
VEGFA-217ENST00000518538 CHMP4CQ96CF2 233 aa25.82■■□□□ 1.72
VEGFA-217ENST00000518538 KAT14Q9H8E8 782 aa25.82■■□□□ 1.72
VEGFA-217ENST00000518538 GABRQQ9UN88 632 aa25.82■■□□□ 1.72
VEGFA-217ENST00000518538 TMEM132BQ14DG7 1078 aa25.81■■□□□ 1.72
VEGFA-217ENST00000518538 SEC23AQ15436 765 aa25.81■■□□□ 1.72
VEGFA-217ENST00000518538 CCDC96Q2M329 555 aa25.81■■□□□ 1.72
VEGFA-217ENST00000518538 KCTD1Q719H9 257 aa25.81■■□□□ 1.72
VEGFA-217ENST00000518538 GPR142Q7Z601 462 aa25.81■■□□□ 1.72
VEGFA-217ENST00000518538 PNMA1Q8ND90 353 aa25.81■■□□□ 1.72
VEGFA-217ENST00000518538 REPS2Q8NFH8 660 aa25.81■■□□□ 1.72
VEGFA-217ENST00000518538 KIFC2Q96AC6 838 aa25.81■■□□□ 1.72
VEGFA-217ENST00000518538 MOV10L1Q9BXT6 1211 aaKnown RBP25.81■■□□□ 1.72
VEGFA-217ENST00000518538 SNHG28P0DPA3 235 aa25.8■■□□□ 1.72
VEGFA-217ENST00000518538 FLT3LGP49771 235 aa25.8■■□□□ 1.72
VEGFA-217ENST00000518538 PLS1Q14651 629 aa25.8■■□□□ 1.72
VEGFA-217ENST00000518538 IFIT1BQ5T764 474 aaKnown RBP25.8■■□□□ 1.72
VEGFA-217ENST00000518538 PLEKHH3Q7Z736 793 aa25.8■■□□□ 1.72
VEGFA-217ENST00000518538 SHCBP1Q8NEM2 672 aa25.8■■□□□ 1.72
VEGFA-217ENST00000518538 RAET1EQ8TD07 263 aa25.8■■□□□ 1.72
VEGFA-217ENST00000518538 FDX1P10109 184 aa25.79■■□□□ 1.72
VEGFA-217ENST00000518538 IKQ13123 557 aaPredicted RBP25.79■■□□□ 1.72
VEGFA-217ENST00000518538 IRF5Q13568 498 aa25.79■■□□□ 1.72
VEGFA-217ENST00000518538 SART3Q15020 963 aaKnown RBP25.79■■□□□ 1.72
VEGFA-217ENST00000518538 SOCS4Q8WXH5 440 aa25.79■■□□□ 1.72
VEGFA-217ENST00000518538 CWC22Q9HCG8 908 aaKnown RBP25.79■■□□□ 1.72
VEGFA-217ENST00000518538 GJD2Q9UKL4 321 aa25.79■■□□□ 1.72
VEGFA-217ENST00000518538 ZNF214Q9UL59 606 aaPredicted RBP25.79■■□□□ 1.72
VEGFA-217ENST00000518538 ERICH2A1L162 156 aa25.78■■□□□ 1.72
VEGFA-217ENST00000518538 IFIT3O14879 490 aaKnown RBP25.78■■□□□ 1.72
VEGFA-217ENST00000518538 EPB41L2O43491 1005 aaKnown RBP25.78■■□□□ 1.72
VEGFA-217ENST00000518538 ZBED4O75132 1171 aa25.78■■□□□ 1.72
VEGFA-217ENST00000518538 ANTXR2P58335 489 aa25.78■■□□□ 1.72
VEGFA-217ENST00000518538 TSGA10IPQ3SY00 556 aa25.78■■□□□ 1.72
VEGFA-217ENST00000518538 SLC38A10Q9HBR0 1119 aa25.78■■□□□ 1.72
VEGFA-217ENST00000518538 CTDP1Q9Y5B0 961 aaPredicted RBP25.78■■□□□ 1.72
VEGFA-217ENST00000518538 COL11A1P12107 1806 aaPredicted RBP25.77■■□□□ 1.72
VEGFA-217ENST00000518538 ATP2A1O14983 1001 aa25.77■■□□□ 1.72
VEGFA-217ENST00000518538 SLC25A27O95847 323 aa25.77■■□□□ 1.72
VEGFA-217ENST00000518538 ZKSCAN1P17029 563 aaPredicted RBP25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms