RNA–Protein interactions for RNA: ENST00000518371.2

MRPS28-203, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-203ENST00000518371 PI16Q6UXB8 463 aa7.44□□□□□ -1.22
MRPS28-203ENST00000518371 TBC1D9Q6ZT07 1266 aa7.44□□□□□ -1.22
MRPS28-203ENST00000518371 LYSMD3Q7Z3D4 306 aa7.44□□□□□ -1.22
MRPS28-203ENST00000518371 ZDHHC15Q96MV8 337 aa7.44□□□□□ -1.22
MRPS28-203ENST00000518371 LRRCC1Q9C099 1032 aa7.44□□□□□ -1.22
MRPS28-203ENST00000518371 DEFB129Q9H1M3 183 aa7.44□□□□□ -1.22
MRPS28-203ENST00000518371 DBNLQ9UJU6 430 aaKnown RBP7.44□□□□□ -1.22
MRPS28-203ENST00000518371 SALL1Q9NSC2 1324 aa7.44□□□□□ -1.22
MRPS28-203ENST00000518371 MEN1O00255 615 aa7.43□□□□□ -1.22
MRPS28-203ENST00000518371 SMARCA5O60264 1052 aaPredicted RBP7.43□□□□□ -1.22
MRPS28-203ENST00000518371 ECE1P42892 770 aa7.43□□□□□ -1.22
MRPS28-203ENST00000518371 GSTO1P78417 241 aa7.43□□□□□ -1.22
MRPS28-203ENST00000518371 AAMPQ13685 434 aa7.43□□□□□ -1.22
MRPS28-203ENST00000518371 RASA3Q14644 834 aa7.43□□□□□ -1.22
MRPS28-203ENST00000518371 SUPT20HL1Q3ZLR7 823 aa7.43□□□□□ -1.22
MRPS28-203ENST00000518371 APOBEC3HQ6NTF7 200 aaKnown RBP7.43□□□□□ -1.22
MRPS28-203ENST00000518371 SAPCD2Q86UD0 394 aa7.43□□□□□ -1.22
MRPS28-203ENST00000518371 ZNF512BQ96KM6 892 aaPredicted RBP7.43□□□□□ -1.22
MRPS28-203ENST00000518371 OSBPL3Q9H4L5 887 aa7.43□□□□□ -1.22
MRPS28-203ENST00000518371 DCTPP1Q9H773 170 aa7.43□□□□□ -1.22
MRPS28-203ENST00000518371 USP40Q9NVE5 1235 aa7.43□□□□□ -1.22
MRPS28-203ENST00000518371 TLR7Q9NYK1 1049 aaKnown RBP7.43□□□□□ -1.22
MRPS28-203ENST00000518371 DAGLAQ9Y4D2 1042 aa7.43□□□□□ -1.22
MRPS28-203ENST00000518371 PCDHB11Q9Y5F2 797 aa7.43□□□□□ -1.22
MRPS28-203ENST00000518371 PPP2R3BQ9Y5P8 575 aa7.43□□□□□ -1.22
MRPS28-203ENST00000518371 PDS5AQ29RF7 1337 aaKnown RBP7.43□□□□□ -1.22
MRPS28-203ENST00000518371 ADAMTSL1Q8N6G6 1762 aa7.42□□□□□ -1.22
MRPS28-203ENST00000518371 RASSF10A6NK89 507 aa7.42□□□□□ -1.22
MRPS28-203ENST00000518371 UBE2Q2LH0YL09 131 aa7.42□□□□□ -1.22
MRPS28-203ENST00000518371 PPP1R12BO60237 982 aaPredicted RBP7.42□□□□□ -1.22
MRPS28-203ENST00000518371 TRAK2O60296 914 aa7.42□□□□□ -1.22
MRPS28-203ENST00000518371 ZAP70P43403 619 aa7.42□□□□□ -1.22
MRPS28-203ENST00000518371 ZNF157P51786 506 aaPredicted RBP7.42□□□□□ -1.22
MRPS28-203ENST00000518371 CACNB3P54284 484 aa7.42□□□□□ -1.22
MRPS28-203ENST00000518371 FKBP1BP68106 108 aa7.42□□□□□ -1.22
MRPS28-203ENST00000518371 MECOMQ03112 1051 aa7.42□□□□□ -1.22
MRPS28-203ENST00000518371 CYP4F22Q6NT55 531 aa7.42□□□□□ -1.22
MRPS28-203ENST00000518371 RGMBQ6NW40 437 aa7.42□□□□□ -1.22
MRPS28-203ENST00000518371 CDC42EP5Q6NZY7 148 aa7.42□□□□□ -1.22
MRPS28-203ENST00000518371 ARMC9Q7Z3E5 817 aa7.42□□□□□ -1.22
MRPS28-203ENST00000518371 EXOC6Q8TAG9 804 aa7.42□□□□□ -1.22
MRPS28-203ENST00000518371 CAPNS2Q96L46 248 aa7.42□□□□□ -1.22
MRPS28-203ENST00000518371 NOL10Q9BSC4 688 aaKnown RBP7.42□□□□□ -1.22
MRPS28-203ENST00000518371 AOX1Q06278 1338 aa7.42□□□□□ -1.22
MRPS28-203ENST00000518371 WDR33Q9C0J8 1336 aaKnown RBP7.42□□□□□ -1.22
MRPS28-203ENST00000518371 CNTNAP1P78357 1384 aa7.42□□□□□ -1.22
MRPS28-203ENST00000518371 A0A1B0GUL6 1792 aa7.41□□□□□ -1.22
MRPS28-203ENST00000518371 IDH1O75874 414 aaKnown RBP7.41□□□□□ -1.22
MRPS28-203ENST00000518371 CYP2E1P05181 493 aaPredicted RBP7.41□□□□□ -1.22
MRPS28-203ENST00000518371 PRKCSHP14314 528 aaPredicted RBP7.41□□□□□ -1.22
MRPS28-203ENST00000518371 BTDP43251 543 aa7.41□□□□□ -1.22
MRPS28-203ENST00000518371 IRX6P78412 446 aaPredicted RBP7.41□□□□□ -1.22
MRPS28-203ENST00000518371 IRF5Q13568 498 aa7.41□□□□□ -1.22
MRPS28-203ENST00000518371 NBPF12Q5TAG4 269 aaPredicted RBP7.41□□□□□ -1.22
MRPS28-203ENST00000518371 NAA16Q6N069 864 aaPredicted RBP7.41□□□□□ -1.22
MRPS28-203ENST00000518371 MOB2Q70IA6 237 aa7.41□□□□□ -1.22
MRPS28-203ENST00000518371 JMYQ8N9B5 988 aa7.41□□□□□ -1.22
MRPS28-203ENST00000518371 ZNF592Q92610 1267 aa7.41□□□□□ -1.22
MRPS28-203ENST00000518371 ACDQ96AP0 544 aa7.41□□□□□ -1.22
MRPS28-203ENST00000518371 NSUN4Q96CB9 384 aaKnown RBP7.41□□□□□ -1.22
MRPS28-203ENST00000518371 HHIPL1Q96JK4 782 aa7.41□□□□□ -1.22
MRPS28-203ENST00000518371 DNAJC2Q99543 621 aaKnown RBP7.41□□□□□ -1.22
MRPS28-203ENST00000518371 TMEM39BQ9GZU3 492 aa7.41□□□□□ -1.22
MRPS28-203ENST00000518371 RWDD1Q9H446 243 aaPredicted RBP7.41□□□□□ -1.22
MRPS28-203ENST00000518371 ANGEL1Q9UNK9 670 aaKnown RBP7.41□□□□□ -1.22
MRPS28-203ENST00000518371 COL1A1P02452 1464 aaPredicted RBP7.41□□□□□ -1.22
MRPS28-203ENST00000518371 GPR75-ASB3A0A0A6YYF3 556 aa7.4□□□□□ -1.22
MRPS28-203ENST00000518371 IGSF3O75054 1194 aa7.4□□□□□ -1.22
MRPS28-203ENST00000518371 BAG3O95817 575 aa7.4□□□□□ -1.22
MRPS28-203ENST00000518371 CYP7A1P22680 504 aa7.4□□□□□ -1.22
MRPS28-203ENST00000518371 GPC1P35052 558 aa7.4□□□□□ -1.22
MRPS28-203ENST00000518371 IREB2P48200 963 aaKnown RBP7.4□□□□□ -1.22
MRPS28-203ENST00000518371 TCP10Q12799 353 aa7.4□□□□□ -1.22
MRPS28-203ENST00000518371 MAP3K12Q12852 859 aa7.4□□□□□ -1.22
MRPS28-203ENST00000518371 TTF1Q15361 905 aaPredicted RBP7.4□□□□□ -1.22
MRPS28-203ENST00000518371 TSGA10IPQ3SY00 556 aa7.4□□□□□ -1.22
MRPS28-203ENST00000518371 ANKRD45Q5TZF3 282 aa7.4□□□□□ -1.22
MRPS28-203ENST00000518371 FKBP1CQ5VVH2 108 aa7.4□□□□□ -1.22
MRPS28-203ENST00000518371 FAM83AQ86UY5 434 aa7.4□□□□□ -1.22
MRPS28-203ENST00000518371 ZSCAN29Q8IWY8 852 aaPredicted RBP7.4□□□□□ -1.22
MRPS28-203ENST00000518371 FAM151AQ8WW52 585 aa7.4□□□□□ -1.22
MRPS28-203ENST00000518371 GCC1Q96CN9 775 aa7.4□□□□□ -1.22
MRPS28-203ENST00000518371 HOOK2Q96ED9 719 aa7.4□□□□□ -1.22
MRPS28-203ENST00000518371 GPATCH3Q96I76 525 aa7.4□□□□□ -1.22
MRPS28-203ENST00000518371 KRTAP9-9Q9BYP9 154 aa7.4□□□□□ -1.22
MRPS28-203ENST00000518371 KRTAP9-4Q9BYQ2 154 aa7.4□□□□□ -1.22
MRPS28-203ENST00000518371 BOLA2Q9H3K6 86 aa7.4□□□□□ -1.22
MRPS28-203ENST00000518371 ANTXR1Q9H6X2 564 aa7.4□□□□□ -1.22
MRPS28-203ENST00000518371 PIH1D3Q9NQM4 214 aaKnown RBP7.4□□□□□ -1.22
MRPS28-203ENST00000518371 MROH7-TTC4A0A0A0MT08 1334 aa7.4□□□□□ -1.22
MRPS28-203ENST00000518371 PSME4Q14997 1843 aa7.4□□□□□ -1.23
MRPS28-203ENST00000518371 GAKO14976 1311 aa7.39□□□□□ -1.23
MRPS28-203ENST00000518371 GOLIM4O00461 696 aa7.39□□□□□ -1.23
MRPS28-203ENST00000518371 AOC2O75106 756 aa7.39□□□□□ -1.23
MRPS28-203ENST00000518371 USP2O75604 605 aaPredicted RBP7.39□□□□□ -1.23
MRPS28-203ENST00000518371 MAP4K4O95819 1239 aaPredicted RBP7.39□□□□□ -1.23
MRPS28-203ENST00000518371 ATP5JP18859 108 aa7.39□□□□□ -1.23
MRPS28-203ENST00000518371 MAP2K2P36507 400 aa7.39□□□□□ -1.23
MRPS28-203ENST00000518371 MAP2K1Q02750 393 aaPredicted RBP7.39□□□□□ -1.23
MRPS28-203ENST00000518371 POU4F2Q12837 409 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms