RNA–Protein interactions for RNA: ENST00000518251.1

BRD9-216, Transcript of bromodomain containing 9, humanhuman

TSL 4

Gene BRD9, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-216ENST00000518251 CTGFP29279 349 aa12.26□□□□□ -0.45
BRD9-216ENST00000518251 SHMT1P34896 483 aa12.26□□□□□ -0.45
BRD9-216ENST00000518251 TNNI2P48788 182 aa12.26□□□□□ -0.45
BRD9-216ENST00000518251 MAP3K9P80192 1104 aa12.26□□□□□ -0.45
BRD9-216ENST00000518251 HMGN5P82970 282 aaKnown RBP12.26□□□□□ -0.45
BRD9-216ENST00000518251 CATIPQ7Z7H3 387 aa12.26□□□□□ -0.45
BRD9-216ENST00000518251 FAM83AQ86UY5 434 aa12.26□□□□□ -0.45
BRD9-216ENST00000518251 DGKHQ86XP1 1220 aa12.26□□□□□ -0.45
BRD9-216ENST00000518251 NSUN7Q8NE18 718 aaKnown RBP12.26□□□□□ -0.45
BRD9-216ENST00000518251 SMARCC2Q8TAQ2 1214 aa12.26□□□□□ -0.45
BRD9-216ENST00000518251 WRNIP1Q96S55 665 aa12.26□□□□□ -0.45
BRD9-216ENST00000518251 CPLX1O14810 134 aa12.25□□□□□ -0.45
BRD9-216ENST00000518251 IRF6O14896 467 aa12.25□□□□□ -0.45
BRD9-216ENST00000518251 JAK2O60674 1132 aa12.25□□□□□ -0.45
BRD9-216ENST00000518251 CDKL5O76039 1030 aa12.25□□□□□ -0.45
BRD9-216ENST00000518251 CALM1P0DP23 149 aa12.25□□□□□ -0.45
BRD9-216ENST00000518251 CALM2P0DP24 149 aa12.25□□□□□ -0.45
BRD9-216ENST00000518251 CALM3P0DP25 149 aa12.25□□□□□ -0.45
BRD9-216ENST00000518251 CETPP11597 493 aa12.25□□□□□ -0.45
BRD9-216ENST00000518251 AKR1B1P15121 316 aa12.25□□□□□ -0.45
BRD9-216ENST00000518251 RXRAP19793 462 aa12.25□□□□□ -0.45
BRD9-216ENST00000518251 ARHGEF6Q15052 776 aa12.25□□□□□ -0.45
BRD9-216ENST00000518251 RTN1Q16799 776 aa12.25□□□□□ -0.45
BRD9-216ENST00000518251 CPLX2Q6PUV4 134 aaKnown RBP12.25□□□□□ -0.45
BRD9-216ENST00000518251 FOXP4Q8IVH2 680 aaPredicted RBP12.25□□□□□ -0.45
BRD9-216ENST00000518251 MYL10Q9BUA6 226 aa12.25□□□□□ -0.45
BRD9-216ENST00000518251 DNAJC18Q9H819 358 aa12.25□□□□□ -0.45
BRD9-216ENST00000518251 KAT14Q9H8E8 782 aa12.25□□□□□ -0.45
BRD9-216ENST00000518251 KIF3AQ9Y496 699 aa12.25□□□□□ -0.45
BRD9-216ENST00000518251 FAM196BA6NMK8 535 aa12.24□□□□□ -0.45
BRD9-216ENST00000518251 CTDNEP1O95476 244 aa12.24□□□□□ -0.45
BRD9-216ENST00000518251 GNRH1P01148 92 aa12.24□□□□□ -0.45
BRD9-216ENST00000518251 PDCP20941 246 aa12.24□□□□□ -0.45
BRD9-216ENST00000518251 PPIL2Q13356 520 aa12.24□□□□□ -0.45
BRD9-216ENST00000518251 RCSD1Q6JBY9 416 aa12.24□□□□□ -0.45
BRD9-216ENST00000518251 CHRDL2Q6WN34 429 aa12.24□□□□□ -0.45
BRD9-216ENST00000518251 UBE2Q1Q7Z7E8 422 aa12.24□□□□□ -0.45
BRD9-216ENST00000518251 METTL16Q86W50 562 aaKnown RBP12.24□□□□□ -0.45
BRD9-216ENST00000518251 ERO1BQ86YB8 467 aa12.24□□□□□ -0.45
BRD9-216ENST00000518251 CCDC144CPQ8IYA2 1237 aa12.24□□□□□ -0.45
BRD9-216ENST00000518251 FAM184AQ8NB25 1140 aa12.24□□□□□ -0.45
BRD9-216ENST00000518251 NUP133Q8WUM0 1156 aa12.24□□□□□ -0.45
BRD9-216ENST00000518251 ANKS1AQ92625 1134 aa12.24□□□□□ -0.45
BRD9-216ENST00000518251 ZKSCAN4Q969J2 545 aaPredicted RBP12.24□□□□□ -0.45
BRD9-216ENST00000518251 CCDC17Q96LX7 622 aa12.24□□□□□ -0.45
BRD9-216ENST00000518251 IL17RBQ9NRM6 502 aa12.24□□□□□ -0.45
BRD9-216ENST00000518251 HERC5Q9UII4 1024 aaKnown RBP12.24□□□□□ -0.45
BRD9-216ENST00000518251 IGKV6D-41A0A0C4DH26 115 aa12.23□□□□□ -0.45
BRD9-216ENST00000518251 CCDC196A0A1B0GTZ2 297 aa12.23□□□□□ -0.45
BRD9-216ENST00000518251 DTNBO60941 627 aa12.23□□□□□ -0.45
BRD9-216ENST00000518251 BRD1O95696 1058 aa12.23□□□□□ -0.45
BRD9-216ENST00000518251 PDIA4P13667 645 aaKnown RBP12.23□□□□□ -0.45
BRD9-216ENST00000518251 SYT1P21579 422 aa12.23□□□□□ -0.45
BRD9-216ENST00000518251 CDC27P30260 824 aa12.23□□□□□ -0.45
BRD9-216ENST00000518251 SNAPC2Q13487 334 aa12.23□□□□□ -0.45
BRD9-216ENST00000518251 PKP1Q13835 747 aa12.23□□□□□ -0.45
BRD9-216ENST00000518251 PPP2R5BQ15173 497 aa12.23□□□□□ -0.45
BRD9-216ENST00000518251 MTFR1Q15390 333 aa12.23□□□□□ -0.45
BRD9-216ENST00000518251 PPP4R3BQ5MIZ7 849 aa12.23□□□□□ -0.45
BRD9-216ENST00000518251 TATDN1Q6P1N9 297 aa12.23□□□□□ -0.45
BRD9-216ENST00000518251 DDX11Q96FC9 970 aa12.23□□□□□ -0.45
BRD9-216ENST00000518251 TRIM47Q96LD4 638 aa12.23□□□□□ -0.45
BRD9-216ENST00000518251 RBM28Q9NW13 759 aaKnown RBP12.23□□□□□ -0.45
BRD9-216ENST00000518251 RBM27Q9P2N5 1060 aaKnown RBP12.23□□□□□ -0.45
BRD9-216ENST00000518251 STX8Q9UNK0 236 aa12.23□□□□□ -0.45
BRD9-216ENST00000518251 STK36Q9NRP7 1315 aa12.22□□□□□ -0.45
BRD9-216ENST00000518251 MPHOSPH10O00566 681 aaKnown RBP12.22□□□□□ -0.45
BRD9-216ENST00000518251 STX6O43752 255 aa12.22□□□□□ -0.45
BRD9-216ENST00000518251 ADD1P35611 737 aaKnown RBP12.22□□□□□ -0.45
BRD9-216ENST00000518251 NOVP48745 357 aa12.22□□□□□ -0.45
BRD9-216ENST00000518251 PRMT2P55345 433 aa12.22□□□□□ -0.45
BRD9-216ENST00000518251 KIF22Q14807 665 aa12.22□□□□□ -0.45
BRD9-216ENST00000518251 CERKLQ49MI3 558 aaPredicted RBP12.22□□□□□ -0.45
BRD9-216ENST00000518251 C17orf99Q6UX52 265 aa12.22□□□□□ -0.45
BRD9-216ENST00000518251 FANCBQ8NB91 859 aa12.22□□□□□ -0.45
BRD9-216ENST00000518251 PNMA1Q8ND90 353 aa12.22□□□□□ -0.45
BRD9-216ENST00000518251 CTCFLQ8NI51 663 aaPredicted RBP12.22□□□□□ -0.45
BRD9-216ENST00000518251 TNPO1Q92973 898 aaKnown RBP12.22□□□□□ -0.45
BRD9-216ENST00000518251 CEP95Q96GE4 821 aa12.22□□□□□ -0.45
BRD9-216ENST00000518251 PRO3102Q9H379 93 aa12.22□□□□□ -0.45
BRD9-216ENST00000518251 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.22□□□□□ -0.45
BRD9-216ENST00000518251 FAM217BQ9NTX9 383 aaPredicted RBP12.22□□□□□ -0.45
BRD9-216ENST00000518251 CPA4Q9UI42 421 aa12.22□□□□□ -0.45
BRD9-216ENST00000518251 RANBP2P49792 3224 aaKnown RBP12.22□□□□□ -0.45
BRD9-216ENST00000518251 ECM2O94769 699 aaPredicted RBP12.21□□□□□ -0.45
BRD9-216ENST00000518251 SLURP2P0DP57 97 aa12.21□□□□□ -0.45
BRD9-216ENST00000518251 TOP1P11387 765 aaKnown RBP12.21□□□□□ -0.45
BRD9-216ENST00000518251 IFNAR1P17181 557 aa12.21□□□□□ -0.45
BRD9-216ENST00000518251 OSBPP22059 807 aa12.21□□□□□ -0.45
BRD9-216ENST00000518251 INPP5BP32019 993 aa12.21□□□□□ -0.45
BRD9-216ENST00000518251 PPATQ06203 517 aa12.21□□□□□ -0.45
BRD9-216ENST00000518251 TROAPQ12815 778 aa12.21□□□□□ -0.45
BRD9-216ENST00000518251 MOGSQ13724 837 aa12.21□□□□□ -0.45
BRD9-216ENST00000518251 LARP1BQ659C4 914 aaKnown RBP12.21□□□□□ -0.45
BRD9-216ENST00000518251 TMEM179Q6ZVK1 233 aa12.21□□□□□ -0.45
BRD9-216ENST00000518251 MAP3K14Q99558 947 aa12.21□□□□□ -0.45
BRD9-216ENST00000518251 TMEM47Q9BQJ4 181 aa12.21□□□□□ -0.45
BRD9-216ENST00000518251 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.21□□□□□ -0.45
BRD9-216ENST00000518251 MTMR4Q9NYA4 1195 aa12.21□□□□□ -0.45
BRD9-216ENST00000518251 ORC3Q9UBD5 711 aaPredicted RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms