RNA–Protein interactions for RNA: ENST00000517766.5

CD47-205, Transcript of CD47 molecule, humanhuman

TSL 2

Gene CD47, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-205ENST00000517766 HRH3Q9Y5N1 445 aa6.93□□□□□ -1.3
CD47-205ENST00000517766 MAST3O60307 1309 aa6.93□□□□□ -1.3
CD47-205ENST00000517766 WDR33Q9C0J8 1336 aaKnown RBP6.93□□□□□ -1.3
CD47-205ENST00000517766 CDK2AP1O14519 115 aa6.92□□□□□ -1.3
CD47-205ENST00000517766 ICMTO60725 284 aa6.92□□□□□ -1.3
CD47-205ENST00000517766 CYP21A2P08686 494 aa6.92□□□□□ -1.3
CD47-205ENST00000517766 ITGB7P26010 798 aa6.92□□□□□ -1.3
CD47-205ENST00000517766 ADD2P35612 726 aa6.92□□□□□ -1.3
CD47-205ENST00000517766 CHRNDQ07001 517 aa6.92□□□□□ -1.3
CD47-205ENST00000517766 MAP3K12Q12852 859 aa6.92□□□□□ -1.3
CD47-205ENST00000517766 SCARF1Q14162 830 aa6.92□□□□□ -1.3
CD47-205ENST00000517766 ZNF772Q68DY9 489 aaPredicted RBP6.92□□□□□ -1.3
CD47-205ENST00000517766 NOL8Q76FK4 1167 aaKnown RBP6.92□□□□□ -1.3
CD47-205ENST00000517766 PTF1AQ7RTS3 328 aa6.92□□□□□ -1.3
CD47-205ENST00000517766 KRT27Q7Z3Y8 459 aa6.92□□□□□ -1.3
CD47-205ENST00000517766 NBPF5PQ86XG9 351 aaPredicted RBP6.92□□□□□ -1.3
CD47-205ENST00000517766 FHDC1Q9C0D6 1143 aaPredicted RBP6.92□□□□□ -1.3
CD47-205ENST00000517766 ANKRD2Q9GZV1 360 aa6.92□□□□□ -1.3
CD47-205ENST00000517766 SEC31BQ9NQW1 1179 aa6.92□□□□□ -1.3
CD47-205ENST00000517766 GNL3LQ9NVN8 582 aaKnown RBP6.92□□□□□ -1.3
CD47-205ENST00000517766 ZNF232Q9UNY5 417 aa6.92□□□□□ -1.3
CD47-205ENST00000517766 IQSEC3Q9UPP2 1182 aaPredicted RBP6.92□□□□□ -1.3
CD47-205ENST00000517766 SMC3Q9UQE7 1217 aa6.92□□□□□ -1.3
CD47-205ENST00000517766 KIAA1551Q9HCM1 1747 aa6.92□□□□□ -1.3
CD47-205ENST00000517766 CARMIL3Q8ND23 1372 aa6.92□□□□□ -1.3
CD47-205ENST00000517766 RGPD3A6NKT7 1758 aaPredicted RBP6.91□□□□□ -1.3
CD47-205ENST00000517766 MAST2Q6P0Q8 1798 aa6.91□□□□□ -1.3
CD47-205ENST00000517766 RGPD4Q7Z3J3 1758 aa6.91□□□□□ -1.3
CD47-205ENST00000517766 M0R2C6 588 aa6.91□□□□□ -1.3
CD47-205ENST00000517766 IGSF3O75054 1194 aa6.91□□□□□ -1.3
CD47-205ENST00000517766 PHKA1P46020 1223 aa6.91□□□□□ -1.3
CD47-205ENST00000517766 KCNQ4P56696 695 aa6.91□□□□□ -1.3
CD47-205ENST00000517766 IMMTQ16891 758 aaKnown RBP6.91□□□□□ -1.3
CD47-205ENST00000517766 CAVIN4Q5BKX8 364 aa6.91□□□□□ -1.3
CD47-205ENST00000517766 FAM182BQ5T319 152 aa6.91□□□□□ -1.3
CD47-205ENST00000517766 C6orf118Q5T5N4 469 aa6.91□□□□□ -1.3
CD47-205ENST00000517766 TMEM214Q6NUQ4 689 aaKnown RBP6.91□□□□□ -1.3
CD47-205ENST00000517766 MRPL14Q6P1L8 145 aaKnown RBP6.91□□□□□ -1.3
CD47-205ENST00000517766 BICDL1Q6ZP65 573 aa6.91□□□□□ -1.3
CD47-205ENST00000517766 DHX32Q7L7V1 743 aaKnown RBP6.91□□□□□ -1.3
CD47-205ENST00000517766 SPATA5Q8NB90 893 aa6.91□□□□□ -1.3
CD47-205ENST00000517766 ZDHHC1Q8WTX9 485 aa6.91□□□□□ -1.3
CD47-205ENST00000517766 OSBP2Q969R2 916 aa6.91□□□□□ -1.3
CD47-205ENST00000517766 ZSCAN10Q96SZ4 725 aaPredicted RBP6.91□□□□□ -1.3
CD47-205ENST00000517766 C2orf49Q9BVC5 232 aaPredicted RBP6.91□□□□□ -1.3
CD47-205ENST00000517766 SRP68Q9UHB9 627 aaKnown RBP6.91□□□□□ -1.3
CD47-205ENST00000517766 ATP6V1DQ9Y5K8 247 aa6.91□□□□□ -1.3
CD47-205ENST00000517766 MYH15Q9Y2K3 1946 aa6.91□□□□□ -1.3
CD47-205ENST00000517766 NPHP1O15259 732 aa6.9□□□□□ -1.3
CD47-205ENST00000517766 GPAA1O43292 621 aa6.9□□□□□ -1.3
CD47-205ENST00000517766 CPA1P15085 419 aa6.9□□□□□ -1.3
CD47-205ENST00000517766 GNAT2P19087 354 aa6.9□□□□□ -1.3
CD47-205ENST00000517766 PDCP20941 246 aa6.9□□□□□ -1.3
CD47-205ENST00000517766 PHKA2P46019 1235 aa6.9□□□□□ -1.3
CD47-205ENST00000517766 PSMA6P60900 246 aaKnown RBP6.9□□□□□ -1.3
CD47-205ENST00000517766 RPS8P62241 208 aaKnown RBP6.9□□□□□ -1.3
CD47-205ENST00000517766 RBM6P78332 1123 aaKnown RBP6.9□□□□□ -1.3
CD47-205ENST00000517766 FGD1P98174 961 aa6.9□□□□□ -1.3
CD47-205ENST00000517766 ECM1Q16610 540 aa6.9□□□□□ -1.3
CD47-205ENST00000517766 NOM1Q5C9Z4 860 aaKnown RBP6.9□□□□□ -1.3
CD47-205ENST00000517766 COX20Q5RI15 118 aa6.9□□□□□ -1.3
CD47-205ENST00000517766 L1TD1Q5T7N2 865 aaKnown RBP6.9□□□□□ -1.3
CD47-205ENST00000517766 SLC9C2Q5TAH2 1124 aa6.9□□□□□ -1.3
CD47-205ENST00000517766 TMED8Q6PL24 325 aaPredicted RBP6.9□□□□□ -1.3
CD47-205ENST00000517766 Q6ZUG5 572 aa6.9□□□□□ -1.3
CD47-205ENST00000517766 CCDC83Q8IWF9 413 aa6.9□□□□□ -1.3
CD47-205ENST00000517766 FBXL16Q8N461 479 aa6.9□□□□□ -1.3
CD47-205ENST00000517766 MEIOBQ8N635 442 aa6.9□□□□□ -1.3
CD47-205ENST00000517766 POLMQ9NP87 494 aaPredicted RBP6.9□□□□□ -1.3
CD47-205ENST00000517766 PIH1D3Q9NQM4 214 aaKnown RBP6.9□□□□□ -1.3
CD47-205ENST00000517766 DENND2AQ9ULE3 1009 aa6.9□□□□□ -1.3
CD47-205ENST00000517766 TPCN1Q9ULQ1 816 aa6.9□□□□□ -1.3
CD47-205ENST00000517766 ISY1Q9ULR0 285 aaKnown RBP6.9□□□□□ -1.3
CD47-205ENST00000517766 ZDHHC9Q9Y397 364 aa6.9□□□□□ -1.3
CD47-205ENST00000517766 ZMYM6O95789 1325 aa6.9□□□□□ -1.3
CD47-205ENST00000517766 WDR19Q8NEZ3 1342 aa6.9□□□□□ -1.3
CD47-205ENST00000517766 TNRC6CQ9HCJ0 1690 aaKnown RBP6.9□□□□□ -1.31
CD47-205ENST00000517766 SERTM1A2A2V5 107 aa6.89□□□□□ -1.31
CD47-205ENST00000517766 E7EWF7 191 aa6.89□□□□□ -1.31
CD47-205ENST00000517766 ZNF213O14771 459 aa6.89□□□□□ -1.31
CD47-205ENST00000517766 STX6O43752 255 aa6.89□□□□□ -1.31
CD47-205ENST00000517766 IDH1O75874 414 aaKnown RBP6.89□□□□□ -1.31
CD47-205ENST00000517766 LARGE1O95461 756 aa6.89□□□□□ -1.31
CD47-205ENST00000517766 CHGBP05060 677 aa6.89□□□□□ -1.31
CD47-205ENST00000517766 PDE6AP16499 860 aa6.89□□□□□ -1.31
CD47-205ENST00000517766 MPSTP25325 297 aa6.89□□□□□ -1.31
CD47-205ENST00000517766 GJB2P29033 226 aa6.89□□□□□ -1.31
CD47-205ENST00000517766 NOS2P35228 1153 aa6.89□□□□□ -1.31
CD47-205ENST00000517766 CTSOP43234 321 aaPredicted RBP6.89□□□□□ -1.31
CD47-205ENST00000517766 ST5P78524 1137 aa6.89□□□□□ -1.31
CD47-205ENST00000517766 PKP1Q13835 747 aa6.89□□□□□ -1.31
CD47-205ENST00000517766 TOB2Q14106 344 aaPredicted RBP6.89□□□□□ -1.31
CD47-205ENST00000517766 ALX1Q15699 326 aa6.89□□□□□ -1.31
CD47-205ENST00000517766 ME3Q16798 604 aa6.89□□□□□ -1.31
CD47-205ENST00000517766 MCTP1Q6DN14 999 aa6.89□□□□□ -1.31
CD47-205ENST00000517766 C16orf46Q6P387 395 aa6.89□□□□□ -1.31
CD47-205ENST00000517766 NCOA7Q8NI08 942 aa6.89□□□□□ -1.31
CD47-205ENST00000517766 HELQQ8TDG4 1101 aa6.89□□□□□ -1.31
CD47-205ENST00000517766 AIDAQ96BJ3 306 aa6.89□□□□□ -1.31
CD47-205ENST00000517766 LLPHQ9BRT6 129 aaKnown RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms