RNA–Protein interactions for RNA: ENST00000517660.1

PDGFRB-203, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 611 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-203ENST00000517660 ICA1Q05084 483 aa12.65□□□□□ -0.38
PDGFRB-203ENST00000517660 COG2Q14746 738 aa12.65□□□□□ -0.38
PDGFRB-203ENST00000517660 PLEKHH3Q7Z736 793 aa12.65□□□□□ -0.38
PDGFRB-203ENST00000517660 SOCS4Q8WXH5 440 aa12.65□□□□□ -0.38
PDGFRB-203ENST00000517660 UHRF1Q96T88 793 aaPredicted RBP12.65□□□□□ -0.38
PDGFRB-203ENST00000517660 KANSL2Q9H9L4 492 aa12.65□□□□□ -0.38
PDGFRB-203ENST00000517660 TMX2Q9Y320 296 aa12.65□□□□□ -0.38
PDGFRB-203ENST00000517660 ARIH1Q9Y4X5 557 aaPredicted RBP12.65□□□□□ -0.38
PDGFRB-203ENST00000517660 FRMPD3Q5JV73 1810 aa12.65□□□□□ -0.39
PDGFRB-203ENST00000517660 LOC285556D6RIA3 1793 aa12.64□□□□□ -0.39
PDGFRB-203ENST00000517660 ATN1P54259 1190 aaPredicted RBP12.64□□□□□ -0.39
PDGFRB-203ENST00000517660 CCL14Q16627 93 aa12.64□□□□□ -0.39
PDGFRB-203ENST00000517660 GPR142Q7Z601 462 aa12.64□□□□□ -0.39
PDGFRB-203ENST00000517660 TRMT44Q8IYL2 757 aaKnown RBP12.64□□□□□ -0.39
PDGFRB-203ENST00000517660 ATXN2LQ8WWM7 1075 aaKnown RBP12.64□□□□□ -0.39
PDGFRB-203ENST00000517660 LPAR1Q92633 364 aa12.64□□□□□ -0.39
PDGFRB-203ENST00000517660 USP6NLQ92738 828 aa12.64□□□□□ -0.39
PDGFRB-203ENST00000517660 NECAB3Q96P71 396 aaPredicted RBP12.64□□□□□ -0.39
PDGFRB-203ENST00000517660 FSD1Q9BTV5 496 aa12.64□□□□□ -0.39
PDGFRB-203ENST00000517660 SENP6Q9GZR1 1112 aaPredicted RBP12.64□□□□□ -0.39
PDGFRB-203ENST00000517660 PORCNQ9H237 461 aa12.64□□□□□ -0.39
PDGFRB-203ENST00000517660 CWC22Q9HCG8 908 aaKnown RBP12.64□□□□□ -0.39
PDGFRB-203ENST00000517660 MYH1P12882 1939 aa12.64□□□□□ -0.39
PDGFRB-203ENST00000517660 CDK5RAP2Q96SN8 1893 aa12.63□□□□□ -0.39
PDGFRB-203ENST00000517660 SPDYE16A6NNV3 312 aaPredicted RBP12.63□□□□□ -0.39
PDGFRB-203ENST00000517660 MINDY4BA8MYZ0 360 aa12.63□□□□□ -0.39
PDGFRB-203ENST00000517660 M0R2C6 588 aa12.63□□□□□ -0.39
PDGFRB-203ENST00000517660 APPP05067 770 aa12.63□□□□□ -0.39
PDGFRB-203ENST00000517660 RGS2P41220 211 aa12.63□□□□□ -0.39
PDGFRB-203ENST00000517660 TDO2P48775 406 aa12.63□□□□□ -0.39
PDGFRB-203ENST00000517660 EPHB4P54760 987 aa12.63□□□□□ -0.39
PDGFRB-203ENST00000517660 RTP1P59025 263 aa12.63□□□□□ -0.39
PDGFRB-203ENST00000517660 KIAA1755Q5JYT7 1200 aa12.63□□□□□ -0.39
PDGFRB-203ENST00000517660 MORN1Q5T089 497 aa12.63□□□□□ -0.39
PDGFRB-203ENST00000517660 BADQ92934 168 aa12.63□□□□□ -0.39
PDGFRB-203ENST00000517660 SNX27Q96L92 541 aa12.63□□□□□ -0.39
PDGFRB-203ENST00000517660 NACAP1Q9BZK3 213 aa12.63□□□□□ -0.39
PDGFRB-203ENST00000517660 TANGO6Q9C0B7 1094 aa12.63□□□□□ -0.39
PDGFRB-203ENST00000517660 RWDD1Q9H446 243 aaPredicted RBP12.63□□□□□ -0.39
PDGFRB-203ENST00000517660 VCPKMTQ9H867 229 aa12.63□□□□□ -0.39
PDGFRB-203ENST00000517660 MKNK2Q9HBH9 465 aa12.63□□□□□ -0.39
PDGFRB-203ENST00000517660 BTBD7Q9P203 1132 aa12.63□□□□□ -0.39
PDGFRB-203ENST00000517660 SALL3Q9BXA9 1300 aa12.62□□□□□ -0.39
PDGFRB-203ENST00000517660 ATAD5Q96QE3 1844 aa12.62□□□□□ -0.39
PDGFRB-203ENST00000517660 SLC15A5A6NIM6 579 aa12.62□□□□□ -0.39
PDGFRB-203ENST00000517660 EEF2P13639 858 aaKnown RBP12.62□□□□□ -0.39
PDGFRB-203ENST00000517660 DSG3P32926 999 aa12.62□□□□□ -0.39
PDGFRB-203ENST00000517660 ATP2B2Q01814 1243 aa12.62□□□□□ -0.39
PDGFRB-203ENST00000517660 ZMYM1Q5SVZ6 1142 aa12.62□□□□□ -0.39
PDGFRB-203ENST00000517660 SH3RF1Q7Z6J0 888 aa12.62□□□□□ -0.39
PDGFRB-203ENST00000517660 CLEC10AQ8IUN9 316 aa12.62□□□□□ -0.39
PDGFRB-203ENST00000517660 IFNL3Q8IZI9 196 aa12.62□□□□□ -0.39
PDGFRB-203ENST00000517660 LRFN3Q9BTN0 628 aa12.62□□□□□ -0.39
PDGFRB-203ENST00000517660 ZNF287Q9HBT7 754 aa12.62□□□□□ -0.39
PDGFRB-203ENST00000517660 TRIM43BA6NCK2 446 aa12.61□□□□□ -0.39
PDGFRB-203ENST00000517660 WDR46O15213 610 aaKnown RBP12.61□□□□□ -0.39
PDGFRB-203ENST00000517660 ZKSCAN1P17029 563 aaPredicted RBP12.61□□□□□ -0.39
PDGFRB-203ENST00000517660 RASA1P20936 1047 aa12.61□□□□□ -0.39
PDGFRB-203ENST00000517660 PTPREP23469 700 aa12.61□□□□□ -0.39
PDGFRB-203ENST00000517660 ITGB8P26012 769 aa12.61□□□□□ -0.39
PDGFRB-203ENST00000517660 PDE1AP54750 535 aa12.61□□□□□ -0.39
PDGFRB-203ENST00000517660 MAP2K5Q13163 448 aa12.61□□□□□ -0.39
PDGFRB-203ENST00000517660 WDR78Q5VTH9 848 aa12.61□□□□□ -0.39
PDGFRB-203ENST00000517660 ZNF444Q8N0Y2 327 aaPredicted RBP12.61□□□□□ -0.39
PDGFRB-203ENST00000517660 SPICE1Q8N0Z3 855 aa12.61□□□□□ -0.39
PDGFRB-203ENST00000517660 STK11IPQ8N1F8 1099 aa12.61□□□□□ -0.39
PDGFRB-203ENST00000517660 MB21D1Q8N884 522 aa12.61□□□□□ -0.39
PDGFRB-203ENST00000517660 TRIM43Q96BQ3 446 aaPredicted RBP12.61□□□□□ -0.39
PDGFRB-203ENST00000517660 EVI5LQ96CN4 794 aa12.61□□□□□ -0.39
PDGFRB-203ENST00000517660 SEC62Q99442 399 aaKnown RBP12.61□□□□□ -0.39
PDGFRB-203ENST00000517660 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.61□□□□□ -0.39
PDGFRB-203ENST00000517660 EPB41L4AQ9HCS5 686 aaPredicted RBP12.61□□□□□ -0.39
PDGFRB-203ENST00000517660 IVNS1ABPQ9Y6Y0 642 aa12.61□□□□□ -0.39
PDGFRB-203ENST00000517660 CHD7Q9P2D1 2997 aa12.61□□□□□ -0.39
PDGFRB-203ENST00000517660 FLOT1O75955 427 aa12.6□□□□□ -0.39
PDGFRB-203ENST00000517660 TICAM2Q86XR7 235 aa12.6□□□□□ -0.39
PDGFRB-203ENST00000517660 SMC5Q8IY18 1101 aa12.6□□□□□ -0.39
PDGFRB-203ENST00000517660 SHCBP1Q8NEM2 672 aa12.6□□□□□ -0.39
PDGFRB-203ENST00000517660 PPM1EQ8WY54 764 aa12.6□□□□□ -0.39
PDGFRB-203ENST00000517660 APBA2Q99767 749 aa12.6□□□□□ -0.39
PDGFRB-203ENST00000517660 MOV10L1Q9BXT6 1211 aaKnown RBP12.6□□□□□ -0.39
PDGFRB-203ENST00000517660 GOPCQ9HD26 462 aa12.6□□□□□ -0.39
PDGFRB-203ENST00000517660 PDLIM7Q9NR12 457 aa12.6□□□□□ -0.39
PDGFRB-203ENST00000517660 NYAP2Q9P242 653 aa12.6□□□□□ -0.39
PDGFRB-203ENST00000517660 THEGQ9P2T0 379 aa12.6□□□□□ -0.39
PDGFRB-203ENST00000517660 ROBO3Q96MS0 1386 aa12.59□□□□□ -0.39
PDGFRB-203ENST00000517660 STRNO43815 780 aa12.59□□□□□ -0.39
PDGFRB-203ENST00000517660 SLC3A2P08195 630 aaKnown RBP12.59□□□□□ -0.39
PDGFRB-203ENST00000517660 DNAJB2P25686 324 aa12.59□□□□□ -0.39
PDGFRB-203ENST00000517660 ALYREFQ86V81 257 aaKnown RBP12.59□□□□□ -0.39
PDGFRB-203ENST00000517660 EXOC6Q8TAG9 804 aa12.59□□□□□ -0.39
PDGFRB-203ENST00000517660 ATG4CQ96DT6 458 aa12.59□□□□□ -0.39
PDGFRB-203ENST00000517660 C1QTNF1Q9BXJ1 281 aa12.59□□□□□ -0.39
PDGFRB-203ENST00000517660 SPATC1LQ9H0A9 340 aa12.59□□□□□ -0.39
PDGFRB-203ENST00000517660 NAPBQ9H115 298 aa12.59□□□□□ -0.39
PDGFRB-203ENST00000517660 FLRT1Q9NZU1 646 aa12.59□□□□□ -0.39
PDGFRB-203ENST00000517660 ATP11BQ9Y2G3 1177 aa12.59□□□□□ -0.39
PDGFRB-203ENST00000517660 RAD21O60216 631 aa12.58□□□□□ -0.4
PDGFRB-203ENST00000517660 PRDM1O75626 825 aa12.58□□□□□ -0.4
PDGFRB-203ENST00000517660 HOXC6P09630 235 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms