RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 MFSD14AQ96MC6 490 aa5.54□□□□□ -1.52
HMGB1P19-201ENST00000517578 OSMRQ99650 979 aa5.54□□□□□ -1.52
HMGB1P19-201ENST00000517578 KIF2CQ99661 725 aa5.54□□□□□ -1.52
HMGB1P19-201ENST00000517578 TMPRSS13Q9BYE2 586 aa5.54□□□□□ -1.52
HMGB1P19-201ENST00000517578 ITGB1BP2Q9UKP3 347 aa5.54□□□□□ -1.52
HMGB1P19-201ENST00000517578 FRMD4BQ9Y2L6 1034 aa5.54□□□□□ -1.52
HMGB1P19-201ENST00000517578 IVNS1ABPQ9Y6Y0 642 aa5.54□□□□□ -1.52
HMGB1P19-201ENST00000517578 KIF7Q2M1P5 1343 aa5.53□□□□□ -1.52
HMGB1P19-201ENST00000517578 SYNRGQ9UMZ2 1314 aa5.53□□□□□ -1.52
HMGB1P19-201ENST00000517578 CECR2Q9BXF3 1484 aa5.53□□□□□ -1.52
HMGB1P19-201ENST00000517578 EPB41L2O43491 1005 aaKnown RBP5.53□□□□□ -1.52
HMGB1P19-201ENST00000517578 CAND2O75155 1236 aa5.53□□□□□ -1.52
HMGB1P19-201ENST00000517578 ERLIN2O94905 339 aa5.53□□□□□ -1.52
HMGB1P19-201ENST00000517578 TIAF1O95411 115 aa5.53□□□□□ -1.52
HMGB1P19-201ENST00000517578 CAVIN2O95810 425 aa5.53□□□□□ -1.52
HMGB1P19-201ENST00000517578 DLGAP3O95886 979 aa5.53□□□□□ -1.52
HMGB1P19-201ENST00000517578 NBPF7P0C2Y1 421 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P19-201ENST00000517578 PNMA6AP0CW24 399 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P19-201ENST00000517578 MYBL2P10244 700 aa5.53□□□□□ -1.52
HMGB1P19-201ENST00000517578 H2AFXP16104 143 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P19-201ENST00000517578 SCP2P22307 547 aa5.53□□□□□ -1.52
HMGB1P19-201ENST00000517578 MAP4P27816 1152 aaKnown RBP5.53□□□□□ -1.52
HMGB1P19-201ENST00000517578 RPS6KA3P51812 740 aa5.53□□□□□ -1.52
HMGB1P19-201ENST00000517578 CDR1P51861 262 aa5.53□□□□□ -1.52
HMGB1P19-201ENST00000517578 GYS2P54840 703 aa5.53□□□□□ -1.52
HMGB1P19-201ENST00000517578 RBM6P78332 1123 aaKnown RBP5.53□□□□□ -1.52
HMGB1P19-201ENST00000517578 CCDC38Q502W7 563 aa5.53□□□□□ -1.52
HMGB1P19-201ENST00000517578 GJC2Q5T442 439 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P19-201ENST00000517578 WDR78Q5VTH9 848 aa5.53□□□□□ -1.52
HMGB1P19-201ENST00000517578 BRAPQ7Z569 592 aa5.53□□□□□ -1.52
HMGB1P19-201ENST00000517578 TRIM74Q86UV6 250 aa5.53□□□□□ -1.52
HMGB1P19-201ENST00000517578 TRIM73Q86UV7 250 aa5.53□□□□□ -1.52
HMGB1P19-201ENST00000517578 MORC1Q86VD1 984 aa5.53□□□□□ -1.52
HMGB1P19-201ENST00000517578 BSNDQ8WZ55 320 aa5.53□□□□□ -1.52
HMGB1P19-201ENST00000517578 SAAL1Q96ER3 474 aa5.53□□□□□ -1.52
HMGB1P19-201ENST00000517578 DTNBP1Q96EV8 351 aa5.53□□□□□ -1.52
HMGB1P19-201ENST00000517578 TRAIPQ9BWF2 469 aa5.53□□□□□ -1.52
HMGB1P19-201ENST00000517578 ZSCAN16Q9H4T2 348 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P19-201ENST00000517578 CWC25Q9NXE8 425 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P19-201ENST00000517578 UTP6Q9NYH9 597 aaKnown RBP5.53□□□□□ -1.52
HMGB1P19-201ENST00000517578 GNEQ9Y223 722 aaKnown RBP5.53□□□□□ -1.52
HMGB1P19-201ENST00000517578 KDRP35968 1356 aa5.53□□□□□ -1.52
HMGB1P19-201ENST00000517578 ROCK1Q13464 1354 aa5.53□□□□□ -1.52
HMGB1P19-201ENST00000517578 SPAG9O60271 1321 aaKnown RBP5.52□□□□□ -1.53
HMGB1P19-201ENST00000517578 KRTAP4-8A0A0G2JLE6 195 aa5.52□□□□□ -1.53
HMGB1P19-201ENST00000517578 LOC100289279A0A1B0GTE1 492 aa5.52□□□□□ -1.53
HMGB1P19-201ENST00000517578 GOLGA6CA6NDK9 693 aa5.52□□□□□ -1.53
HMGB1P19-201ENST00000517578 GOLGA6BA6NDN3 693 aa5.52□□□□□ -1.53
HMGB1P19-201ENST00000517578 GOLGA6L9A6NEM1 432 aa5.52□□□□□ -1.53
HMGB1P19-201ENST00000517578 U2SURPO15042 1029 aaKnown RBP5.52□□□□□ -1.53
HMGB1P19-201ENST00000517578 GAS2O43903 313 aaKnown RBP5.52□□□□□ -1.53
HMGB1P19-201ENST00000517578 PLIN1O60240 522 aa5.52□□□□□ -1.53
HMGB1P19-201ENST00000517578 PPFIA4O75335 1185 aa5.52□□□□□ -1.53
HMGB1P19-201ENST00000517578 PRPF40AO75400 957 aaKnown RBP5.52□□□□□ -1.53
HMGB1P19-201ENST00000517578 WNT11O96014 354 aa5.52□□□□□ -1.53
HMGB1P19-201ENST00000517578 GOLGA6DP0CG33 693 aa5.52□□□□□ -1.53
HMGB1P19-201ENST00000517578 EZRP15311 586 aaKnown RBP5.52□□□□□ -1.53
HMGB1P19-201ENST00000517578 YY1P25490 414 aa5.52□□□□□ -1.53
HMGB1P19-201ENST00000517578 TXKP42681 527 aa5.52□□□□□ -1.53
HMGB1P19-201ENST00000517578 ARL4DP49703 201 aa5.52□□□□□ -1.53
HMGB1P19-201ENST00000517578 SESN3P58005 492 aa5.52□□□□□ -1.53
HMGB1P19-201ENST00000517578 IKBKEQ14164 716 aa5.52□□□□□ -1.53
HMGB1P19-201ENST00000517578 PTPN14Q15678 1187 aa5.52□□□□□ -1.53
HMGB1P19-201ENST00000517578 TPD52L1Q16890 204 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P19-201ENST00000517578 RCSD1Q6JBY9 416 aa5.52□□□□□ -1.53
HMGB1P19-201ENST00000517578 CCDC170Q8IYT3 715 aa5.52□□□□□ -1.53
HMGB1P19-201ENST00000517578 SHISA5Q8N114 240 aa5.52□□□□□ -1.53
HMGB1P19-201ENST00000517578 FAM177A1Q8N128 213 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P19-201ENST00000517578 SMG8Q8ND04 991 aaKnown RBP5.52□□□□□ -1.53
HMGB1P19-201ENST00000517578 ZCRB1Q8TBF4 217 aaKnown RBP5.52□□□□□ -1.53
HMGB1P19-201ENST00000517578 C17orf50Q8WW18 174 aa5.52□□□□□ -1.53
HMGB1P19-201ENST00000517578 ZNF428Q96B54 188 aa5.52□□□□□ -1.53
HMGB1P19-201ENST00000517578 FAXDC2Q96IV6 333 aa5.52□□□□□ -1.53
HMGB1P19-201ENST00000517578 CABS1Q96KC9 395 aa5.52□□□□□ -1.53
HMGB1P19-201ENST00000517578 AGAP3Q96P47 875 aa5.52□□□□□ -1.53
HMGB1P19-201ENST00000517578 LZTS2Q9BRK4 669 aa5.52□□□□□ -1.53
HMGB1P19-201ENST00000517578 MMTAG2Q9BU76 263 aaKnown RBP5.52□□□□□ -1.53
HMGB1P19-201ENST00000517578 SUGCTQ9HAC7 445 aa5.52□□□□□ -1.53
HMGB1P19-201ENST00000517578 ZFYVE28Q9HCC9 887 aa5.52□□□□□ -1.53
HMGB1P19-201ENST00000517578 KCND1Q9NSA2 647 aa5.52□□□□□ -1.53
HMGB1P19-201ENST00000517578 GOLGA6AQ9NYA3 693 aa5.52□□□□□ -1.53
HMGB1P19-201ENST00000517578 SUN2Q9UH99 717 aa5.52□□□□□ -1.53
HMGB1P19-201ENST00000517578 ADGRE2Q9UHX3 823 aa5.52□□□□□ -1.53
HMGB1P19-201ENST00000517578 AKAP2Q9Y2D5 859 aa5.52□□□□□ -1.53
HMGB1P19-201ENST00000517578 AMOTL2Q9Y2J4 779 aa5.52□□□□□ -1.53
HMGB1P19-201ENST00000517578 SYCE3A1L190 88 aa5.51□□□□□ -1.53
HMGB1P19-201ENST00000517578 POLR3GO15318 223 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P19-201ENST00000517578 F13BP05160 661 aa5.51□□□□□ -1.53
HMGB1P19-201ENST00000517578 EDN3P14138 238 aa5.51□□□□□ -1.53
HMGB1P19-201ENST00000517578 LMAN1P49257 510 aa5.51□□□□□ -1.53
HMGB1P19-201ENST00000517578 MCM2P49736 904 aa5.51□□□□□ -1.53
HMGB1P19-201ENST00000517578 RASA3Q14644 834 aa5.51□□□□□ -1.53
HMGB1P19-201ENST00000517578 SMC1AQ14683 1233 aaKnown RBP5.51□□□□□ -1.53
HMGB1P19-201ENST00000517578 MSMPQ1L6U9 139 aa5.51□□□□□ -1.53
HMGB1P19-201ENST00000517578 C20orf194Q5TEA3 1177 aa5.51□□□□□ -1.53
HMGB1P19-201ENST00000517578 PEAR1Q5VY43 1037 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P19-201ENST00000517578 NUTM2GQ5VZR2 741 aa5.51□□□□□ -1.53
HMGB1P19-201ENST00000517578 ZNF280DQ6N043 979 aa5.51□□□□□ -1.53
HMGB1P19-201ENST00000517578 MICALCLQ6ZW33 695 aa5.51□□□□□ -1.53
HMGB1P19-201ENST00000517578 ACRBPQ8NEB7 543 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms