RNA–Protein interactions for RNA: ENST00000517484.5

EFCAB13-203, Transcript of EF-hand calcium binding domain 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene EFCAB13, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-203ENST00000517484 CCNT1O60563 726 aaKnown RBP11.17□□□□□ -0.62
EFCAB13-203ENST00000517484 MMP1P03956 469 aa11.17□□□□□ -0.62
EFCAB13-203ENST00000517484 INPP5BP32019 993 aa11.17□□□□□ -0.62
EFCAB13-203ENST00000517484 TYW1BQ6NUM6 668 aa11.17□□□□□ -0.62
EFCAB13-203ENST00000517484 DGKHQ86XP1 1220 aa11.17□□□□□ -0.62
EFCAB13-203ENST00000517484 DEFB129Q9H1M3 183 aa11.17□□□□□ -0.62
EFCAB13-203ENST00000517484 GOLPH3LQ9H4A5 285 aa11.17□□□□□ -0.62
EFCAB13-203ENST00000517484 GGA3Q9NZ52 723 aa11.17□□□□□ -0.62
EFCAB13-203ENST00000517484 HACL1Q9UJ83 578 aa11.17□□□□□ -0.62
EFCAB13-203ENST00000517484 NOL7Q9UMY1 257 aaKnown RBP11.17□□□□□ -0.62
EFCAB13-203ENST00000517484 MYO5AQ9Y4I1 1855 aaKnown RBP11.17□□□□□ -0.62
EFCAB13-203ENST00000517484 POLR2DO15514 142 aaKnown RBP11.17□□□□□ -0.62
EFCAB13-203ENST00000517484 SYKP43405 635 aa11.17□□□□□ -0.62
EFCAB13-203ENST00000517484 CCDC125Q86Z20 511 aa11.17□□□□□ -0.62
EFCAB13-203ENST00000517484 CNNM3Q8NE01 707 aa11.17□□□□□ -0.62
EFCAB13-203ENST00000517484 ZNF830Q96NB3 372 aaPredicted RBP11.17□□□□□ -0.62
EFCAB13-203ENST00000517484 ZNF341Q9BYN7 854 aa11.17□□□□□ -0.62
EFCAB13-203ENST00000517484 RBM28Q9NW13 759 aaKnown RBP11.17□□□□□ -0.62
EFCAB13-203ENST00000517484 SALL1Q9NSC2 1324 aa11.17□□□□□ -0.62
EFCAB13-203ENST00000517484 TNRC6CQ9HCJ0 1690 aaKnown RBP11.17□□□□□ -0.62
EFCAB13-203ENST00000517484 WNT7AO00755 349 aa11.17□□□□□ -0.62
EFCAB13-203ENST00000517484 ERCC3P19447 782 aa11.17□□□□□ -0.62
EFCAB13-203ENST00000517484 ZNF76P36508 570 aa11.17□□□□□ -0.62
EFCAB13-203ENST00000517484 TXKP42681 527 aa11.17□□□□□ -0.62
EFCAB13-203ENST00000517484 SP4Q02446 784 aa11.17□□□□□ -0.62
EFCAB13-203ENST00000517484 RAD51AP2Q09MP3 1159 aa11.17□□□□□ -0.62
EFCAB13-203ENST00000517484 FAM83BQ5T0W9 1011 aa11.17□□□□□ -0.62
EFCAB13-203ENST00000517484 WWC2Q6AWC2 1192 aa11.17□□□□□ -0.62
EFCAB13-203ENST00000517484 EPSTI1Q96J88 318 aa11.17□□□□□ -0.62
EFCAB13-203ENST00000517484 ALDH8A1Q9H2A2 487 aaPredicted RBP11.17□□□□□ -0.62
EFCAB13-203ENST00000517484 DNAJC18Q9H819 358 aa11.17□□□□□ -0.62
EFCAB13-203ENST00000517484 MKRN1Q9UHC7 482 aaKnown RBP11.17□□□□□ -0.62
EFCAB13-203ENST00000517484 PEX10O60683 326 aa11.16□□□□□ -0.62
EFCAB13-203ENST00000517484 LMOD1P29536 600 aaPredicted RBP11.16□□□□□ -0.62
EFCAB13-203ENST00000517484 SPP2Q13103 211 aa11.16□□□□□ -0.62
EFCAB13-203ENST00000517484 PTGDRQ13258 359 aa11.16□□□□□ -0.62
EFCAB13-203ENST00000517484 RRP1BQ14684 758 aaKnown RBP11.16□□□□□ -0.62
EFCAB13-203ENST00000517484 KIF4BQ2VIQ3 1234 aa11.16□□□□□ -0.62
EFCAB13-203ENST00000517484 ANO6Q4KMQ2 910 aa11.16□□□□□ -0.62
EFCAB13-203ENST00000517484 C15orf52Q6ZUT6 534 aaKnown RBP11.16□□□□□ -0.62
EFCAB13-203ENST00000517484 MOB2Q70IA6 237 aa11.16□□□□□ -0.62
EFCAB13-203ENST00000517484 TRPM4Q8TD43 1214 aa11.16□□□□□ -0.62
EFCAB13-203ENST00000517484 MRPS27Q92552 414 aaKnown RBP11.16□□□□□ -0.62
EFCAB13-203ENST00000517484 SERPINA10Q9UK55 444 aa11.16□□□□□ -0.62
EFCAB13-203ENST00000517484 PCDHA1Q9Y5I3 950 aa11.16□□□□□ -0.62
EFCAB13-203ENST00000517484 PP2D1A8MPX8 630 aa11.16□□□□□ -0.62
EFCAB13-203ENST00000517484 MRE11P49959 708 aa11.16□□□□□ -0.62
EFCAB13-203ENST00000517484 C9orf131Q5VYM1 1079 aa11.16□□□□□ -0.62
EFCAB13-203ENST00000517484 LINC00301Q8NCQ3 95 aa11.16□□□□□ -0.62
EFCAB13-203ENST00000517484 MAD2L2Q9UI95 211 aa11.16□□□□□ -0.62
EFCAB13-203ENST00000517484 GAKO14976 1311 aa11.16□□□□□ -0.62
EFCAB13-203ENST00000517484 ZNF541Q9H0D2 1346 aa11.16□□□□□ -0.62
EFCAB13-203ENST00000517484 GOLGA6L19H0YKK7 550 aa11.15□□□□□ -0.62
EFCAB13-203ENST00000517484 FOXN1O15353 648 aa11.15□□□□□ -0.62
EFCAB13-203ENST00000517484 PDHBP11177 359 aa11.15□□□□□ -0.62
EFCAB13-203ENST00000517484 PKN1Q16512 942 aa11.15□□□□□ -0.62
EFCAB13-203ENST00000517484 ADGRF4Q8IZF3 695 aa11.15□□□□□ -0.62
EFCAB13-203ENST00000517484 JMYQ8N9B5 988 aa11.15□□□□□ -0.62
EFCAB13-203ENST00000517484 WRNIP1Q96S55 665 aa11.15□□□□□ -0.62
EFCAB13-203ENST00000517484 RNF26Q9BY78 433 aaPredicted RBP11.15□□□□□ -0.62
EFCAB13-203ENST00000517484 DDAH1O94760 285 aa11.15□□□□□ -0.62
EFCAB13-203ENST00000517484 CCDC192P0DO97 292 aa11.15□□□□□ -0.62
EFCAB13-203ENST00000517484 GNAQP50148 359 aa11.15□□□□□ -0.62
EFCAB13-203ENST00000517484 TTC38Q5R3I4 469 aa11.15□□□□□ -0.62
EFCAB13-203ENST00000517484 BLIDQ8IZY5 108 aa11.15□□□□□ -0.62
EFCAB13-203ENST00000517484 BLZF1Q9H2G9 400 aa11.15□□□□□ -0.62
EFCAB13-203ENST00000517484 KANSL2Q9H9L4 492 aa11.15□□□□□ -0.63
EFCAB13-203ENST00000517484 ZNF202O95125 648 aa11.14□□□□□ -0.63
EFCAB13-203ENST00000517484 PFKFB1P16118 471 aa11.14□□□□□ -0.63
EFCAB13-203ENST00000517484 STX17P56962 302 aa11.14□□□□□ -0.63
EFCAB13-203ENST00000517484 FMR1Q06787 632 aaKnown RBP eCLIP11.14□□□□□ -0.63
EFCAB13-203ENST00000517484 PNOCQ13519 176 aa11.14□□□□□ -0.63
EFCAB13-203ENST00000517484 LRSAM1Q6UWE0 723 aa11.14□□□□□ -0.63
EFCAB13-203ENST00000517484 BRAPQ7Z569 592 aa11.14□□□□□ -0.63
EFCAB13-203ENST00000517484 FAM163AQ96GL9 167 aaPredicted RBP11.14□□□□□ -0.63
EFCAB13-203ENST00000517484 DHX36Q9H2U1 1008 aaKnown RBP11.14□□□□□ -0.63
EFCAB13-203ENST00000517484 ZHX2Q9Y6X8 837 aa11.14□□□□□ -0.63
EFCAB13-203ENST00000517484 BAZ2AQ9UIF9 1905 aaKnown RBP11.14□□□□□ -0.63
EFCAB13-203ENST00000517484 A0A1W2PRG0 241 aa11.14□□□□□ -0.63
EFCAB13-203ENST00000517484 NDUFB10O96000 172 aa11.14□□□□□ -0.63
EFCAB13-203ENST00000517484 VIL1P09327 827 aaKnown RBP11.14□□□□□ -0.63
EFCAB13-203ENST00000517484 FOXP4Q8IVH2 680 aaPredicted RBP11.14□□□□□ -0.63
EFCAB13-203ENST00000517484 KCNG4Q8TDN1 519 aa11.14□□□□□ -0.63
EFCAB13-203ENST00000517484 TRIM5Q9C035 493 aa11.14□□□□□ -0.63
EFCAB13-203ENST00000517484 CSRNP2Q9H175 543 aa11.14□□□□□ -0.63
EFCAB13-203ENST00000517484 MYH3P11055 1940 aa11.14□□□□□ -0.63
EFCAB13-203ENST00000517484 DDX39AO00148 427 aaKnown RBP11.14□□□□□ -0.63
EFCAB13-203ENST00000517484 PRPF3O43395 683 aaKnown RBP11.14□□□□□ -0.63
EFCAB13-203ENST00000517484 CHMP2AO43633 222 aa11.14□□□□□ -0.63
EFCAB13-203ENST00000517484 PTGER2P43116 358 aa11.14□□□□□ -0.63
EFCAB13-203ENST00000517484 NSMFQ6X4W1 530 aa11.14□□□□□ -0.63
EFCAB13-203ENST00000517484 C6orf50Q9HD87 102 aa11.14□□□□□ -0.63
EFCAB13-203ENST00000517484 FAM13BQ9NYF5 915 aa11.14□□□□□ -0.63
EFCAB13-203ENST00000517484 TECP42680 631 aa11.13□□□□□ -0.63
EFCAB13-203ENST00000517484 ZNF165P49910 485 aa11.13□□□□□ -0.63
EFCAB13-203ENST00000517484 PRELPP51888 382 aa11.13□□□□□ -0.63
EFCAB13-203ENST00000517484 CHMP4BP1P59074 171 aa11.13□□□□□ -0.63
EFCAB13-203ENST00000517484 TYRO3Q06418 890 aa11.13□□□□□ -0.63
EFCAB13-203ENST00000517484 ZBTB21Q9ULJ3 1066 aa11.13□□□□□ -0.63
EFCAB13-203ENST00000517484 MYH13Q9UKX3 1938 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms