RNA–Protein interactions for RNA: ENST00000516595.1

SCARNA16.3-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 184 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.3-201ENST00000516595 NBPF7P0C2Y1 421 aaPredicted RBP2.72□□□□□ -1.97
SCARNA16.3-201ENST00000516595 SRGNP10124 158 aa2.72□□□□□ -1.97
SCARNA16.3-201ENST00000516595 COL11A2P13942 1736 aaPredicted RBP2.72□□□□□ -1.97
SCARNA16.3-201ENST00000516595 NPR1P16066 1061 aa2.72□□□□□ -1.97
SCARNA16.3-201ENST00000516595 ZNF16P17020 682 aaPredicted RBP2.72□□□□□ -1.97
SCARNA16.3-201ENST00000516595 GPTP24298 496 aa2.72□□□□□ -1.97
SCARNA16.3-201ENST00000516595 RFX5P48382 616 aaPredicted RBP2.72□□□□□ -1.97
SCARNA16.3-201ENST00000516595 FOXO4P98177 505 aa2.72□□□□□ -1.97
SCARNA16.3-201ENST00000516595 HYAL2Q12891 473 aa2.72□□□□□ -1.97
SCARNA16.3-201ENST00000516595 GRAPQ13588 217 aa2.72□□□□□ -1.97
SCARNA16.3-201ENST00000516595 UBAP2LQ14157 1087 aaKnown RBP2.72□□□□□ -1.97
SCARNA16.3-201ENST00000516595 DSC3Q14574 896 aa2.72□□□□□ -1.97
SCARNA16.3-201ENST00000516595 ENOX2Q16206 610 aaKnown RBP2.72□□□□□ -1.97
SCARNA16.3-201ENST00000516595 PCSK7Q16549 785 aa2.72□□□□□ -1.97
SCARNA16.3-201ENST00000516595 LARP7Q4G0J3 582 aaKnown RBP eCLIP2.72□□□□□ -1.97
SCARNA16.3-201ENST00000516595 CCDC152Q4G0S7 254 aa2.72□□□□□ -1.97
SCARNA16.3-201ENST00000516595 C20orf194Q5TEA3 1177 aa2.72□□□□□ -1.97
SCARNA16.3-201ENST00000516595 MSL1Q68DK7 614 aa2.72□□□□□ -1.97
SCARNA16.3-201ENST00000516595 STYK1Q6J9G0 422 aa2.72□□□□□ -1.97
SCARNA16.3-201ENST00000516595 CEP85Q6P2H3 762 aa2.72□□□□□ -1.97
SCARNA16.3-201ENST00000516595 DHX32Q7L7V1 743 aaKnown RBP2.72□□□□□ -1.97
SCARNA16.3-201ENST00000516595 UBE3BQ7Z3V4 1068 aa2.72□□□□□ -1.97
SCARNA16.3-201ENST00000516595 NPAS4Q8IUM7 802 aa2.72□□□□□ -1.97
SCARNA16.3-201ENST00000516595 ITPRIPQ8IWB1 547 aa2.72□□□□□ -1.97
SCARNA16.3-201ENST00000516595 GPR161Q8N6U8 529 aaKnown RBP2.72□□□□□ -1.97
SCARNA16.3-201ENST00000516595 ANKRD31Q8N7Z5 1873 aa2.72□□□□□ -1.97
SCARNA16.3-201ENST00000516595 ANKRD44Q8N8A2 993 aa2.72□□□□□ -1.97
SCARNA16.3-201ENST00000516595 TTLL11Q8NHH1 800 aa2.72□□□□□ -1.97
SCARNA16.3-201ENST00000516595 GRAPLQ8TC17 118 aaPredicted RBP2.72□□□□□ -1.97
SCARNA16.3-201ENST00000516595 PANK1Q8TE04 598 aa2.72□□□□□ -1.97
SCARNA16.3-201ENST00000516595 EPS8L3Q8TE67 593 aaKnown RBP2.72□□□□□ -1.97
SCARNA16.3-201ENST00000516595 SSH3Q8TE77 659 aa2.72□□□□□ -1.97
SCARNA16.3-201ENST00000516595 SNX29Q8TEQ0 813 aa2.72□□□□□ -1.97
SCARNA16.3-201ENST00000516595 CCDC74AQ96AQ1 378 aa2.72□□□□□ -1.97
SCARNA16.3-201ENST00000516595 ALKBH8Q96BT7 664 aaKnown RBP2.72□□□□□ -1.97
SCARNA16.3-201ENST00000516595 MRRFQ96E11 262 aaKnown RBP2.72□□□□□ -1.97
SCARNA16.3-201ENST00000516595 FAM89AQ96GI7 184 aa2.72□□□□□ -1.97
SCARNA16.3-201ENST00000516595 MASTLQ96GX5 879 aa2.72□□□□□ -1.97
SCARNA16.3-201ENST00000516595 KAZALD1Q96I82 304 aa2.72□□□□□ -1.97
SCARNA16.3-201ENST00000516595 SUCLG2Q96I99 432 aa2.72□□□□□ -1.97
SCARNA16.3-201ENST00000516595 FAM161BQ96MY7 647 aa2.72□□□□□ -1.97
SCARNA16.3-201ENST00000516595 CNTNAP3BQ96NU0 1288 aa2.72□□□□□ -1.97
SCARNA16.3-201ENST00000516595 NSUN5Q96P11 429 aaKnown RBP2.72□□□□□ -1.97
SCARNA16.3-201ENST00000516595 CRAMP1Q96RY5 1269 aa2.72□□□□□ -1.97
SCARNA16.3-201ENST00000516595 CDC5LQ99459 802 aaKnown RBP2.72□□□□□ -1.97
SCARNA16.3-201ENST00000516595 DUSP9Q99956 384 aaKnown RBP2.72□□□□□ -1.97
SCARNA16.3-201ENST00000516595 COL25A1Q9BXS0 654 aaPredicted RBP2.72□□□□□ -1.97
SCARNA16.3-201ENST00000516595 CNTNAP3Q9BZ76 1288 aa2.72□□□□□ -1.97
SCARNA16.3-201ENST00000516595 DNAJC25Q9H1X3 360 aa2.72□□□□□ -1.97
SCARNA16.3-201ENST00000516595 EHD4Q9H223 541 aa2.72□□□□□ -1.97
SCARNA16.3-201ENST00000516595 EFCC1Q9HA90 598 aa2.72□□□□□ -1.97
SCARNA16.3-201ENST00000516595 C11orf16Q9NQ32 467 aa2.72□□□□□ -1.97
SCARNA16.3-201ENST00000516595 COPRSQ9NQ92 184 aa2.72□□□□□ -1.97
SCARNA16.3-201ENST00000516595 TLR7Q9NYK1 1049 aaKnown RBP2.72□□□□□ -1.97
SCARNA16.3-201ENST00000516595 VTI1BQ9UEU0 232 aa2.72□□□□□ -1.97
SCARNA16.3-201ENST00000516595 PARP2Q9UGN5 583 aa2.72□□□□□ -1.97
SCARNA16.3-201ENST00000516595 TNNQ9UQP3 1299 aa2.72□□□□□ -1.97
SCARNA16.3-201ENST00000516595 SUPT16HQ9Y5B9 1047 aaKnown RBP2.72□□□□□ -1.97
SCARNA16.3-201ENST00000516595 LTBP3Q9NS15 1303 aa2.71□□□□□ -1.98
SCARNA16.3-201ENST00000516595 GOLGB1Q14789 3259 aaKnown RBP2.71□□□□□ -1.98
SCARNA16.3-201ENST00000516595 BRCA1P38398 1863 aaKnown RBP2.71□□□□□ -1.98
SCARNA16.3-201ENST00000516595 ANKRD18BA2A2Z9 1011 aa2.71□□□□□ -1.98
SCARNA16.3-201ENST00000516595 H0YIN7 160 aa2.71□□□□□ -1.98
SCARNA16.3-201ENST00000516595 H3BM21 787 aa2.71□□□□□ -1.98
SCARNA16.3-201ENST00000516595 C2CD2LO14523 706 aa2.71□□□□□ -1.98
SCARNA16.3-201ENST00000516595 NPHP1O15259 732 aa2.71□□□□□ -1.98
SCARNA16.3-201ENST00000516595 SORBS3O60504 671 aa2.71□□□□□ -1.98
SCARNA16.3-201ENST00000516595 IGSF3O75054 1194 aa2.71□□□□□ -1.98
SCARNA16.3-201ENST00000516595 PRPF40AO75400 957 aaKnown RBP2.71□□□□□ -1.98
SCARNA16.3-201ENST00000516595 BBOX1O75936 387 aa2.71□□□□□ -1.98
SCARNA16.3-201ENST00000516595 CIAO1O76071 339 aa2.71□□□□□ -1.98
SCARNA16.3-201ENST00000516595 EDN3P14138 238 aa2.71□□□□□ -1.98
SCARNA16.3-201ENST00000516595 CPB1P15086 417 aa2.71□□□□□ -1.98
SCARNA16.3-201ENST00000516595 EIF2AK2P19525 551 aaKnown RBP2.71□□□□□ -1.98
SCARNA16.3-201ENST00000516595 KCNA3P22001 575 aa2.71□□□□□ -1.98
SCARNA16.3-201ENST00000516595 AMPD1P23109 780 aa2.71□□□□□ -1.98
SCARNA16.3-201ENST00000516595 GRNP28799 593 aaKnown RBP2.71□□□□□ -1.98
SCARNA16.3-201ENST00000516595 ALDH1B1P30837 517 aa2.71□□□□□ -1.98
SCARNA16.3-201ENST00000516595 IGHMBP2P38935 993 aaKnown RBP2.71□□□□□ -1.98
SCARNA16.3-201ENST00000516595 MAP2K3P46734 347 aa2.71□□□□□ -1.98
SCARNA16.3-201ENST00000516595 PTPN12Q05209 780 aaKnown RBP2.71□□□□□ -1.98
SCARNA16.3-201ENST00000516595 IFIT5Q13325 482 aaKnown RBP2.71□□□□□ -1.98
SCARNA16.3-201ENST00000516595 HDAC1Q13547 482 aaPredicted RBP2.71□□□□□ -1.98
SCARNA16.3-201ENST00000516595 COL19A1Q14993 1142 aa2.71□□□□□ -1.98
SCARNA16.3-201ENST00000516595 CCDC57Q2TAC2 916 aa2.71□□□□□ -1.98
SCARNA16.3-201ENST00000516595 HSP90AB4PQ58FF6 505 aa2.71□□□□□ -1.98
SCARNA16.3-201ENST00000516595 EPHA10Q5JZY3 1008 aa2.71□□□□□ -1.98
SCARNA16.3-201ENST00000516595 SOGA3Q5TF21 947 aa2.71□□□□□ -1.98
SCARNA16.3-201ENST00000516595 ELMSAN1Q6PJG2 1045 aa2.71□□□□□ -1.98
SCARNA16.3-201ENST00000516595 LMBR1LQ6UX01 489 aa2.71□□□□□ -1.98
SCARNA16.3-201ENST00000516595 DDX46Q7L014 1031 aaKnown RBP2.71□□□□□ -1.98
SCARNA16.3-201ENST00000516595 FAM35AQ86V20 835 aa2.71□□□□□ -1.98
SCARNA16.3-201ENST00000516595 NPAS3Q8IXF0 933 aa2.71□□□□□ -1.98
SCARNA16.3-201ENST00000516595 OR13H1Q8NG92 308 aa2.71□□□□□ -1.98
SCARNA16.3-201ENST00000516595 ASAP3Q8TDY4 903 aa2.71□□□□□ -1.98
SCARNA16.3-201ENST00000516595 RPGRQ92834 1020 aaKnown RBP2.71□□□□□ -1.98
SCARNA16.3-201ENST00000516595 CRBNQ96SW2 442 aa2.71□□□□□ -1.98
SCARNA16.3-201ENST00000516595 PSMD1Q99460 953 aa2.71□□□□□ -1.98
SCARNA16.3-201ENST00000516595 OSMRQ99650 979 aa2.71□□□□□ -1.98
SCARNA16.3-201ENST00000516595 SYT17Q9BSW7 474 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms