RNA–Protein interactions for RNA: ENST00000515587.1

PDCD6-211, Transcript of programmed cell death 6, humanhuman

TSL 1 (best)

Gene PDCD6, Length 855 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-211ENST00000515587 SLFN13Q68D06 897 aa17.68■□□□□ 0.42
PDCD6-211ENST00000515587 GPAT2Q6NUI2 795 aa17.68■□□□□ 0.42
PDCD6-211ENST00000515587 ANKS1AQ92625 1134 aa17.68■□□□□ 0.42
PDCD6-211ENST00000515587 TANGO6Q9C0B7 1094 aa17.68■□□□□ 0.42
PDCD6-211ENST00000515587 RPAP3Q9H6T3 665 aaPredicted RBP17.68■□□□□ 0.42
PDCD6-211ENST00000515587 ISY1Q9ULR0 285 aaKnown RBP17.68■□□□□ 0.42
PDCD6-211ENST00000515587 DLL1O00548 723 aa17.67■□□□□ 0.42
PDCD6-211ENST00000515587 NDUFB10O96000 172 aa17.67■□□□□ 0.42
PDCD6-211ENST00000515587 HOXA7P31268 230 aaPredicted RBP17.67■□□□□ 0.42
PDCD6-211ENST00000515587 ANTXR2P58335 489 aa17.67■□□□□ 0.42
PDCD6-211ENST00000515587 FGD1P98174 961 aa17.67■□□□□ 0.42
PDCD6-211ENST00000515587 RCSD1Q6JBY9 416 aa17.67■□□□□ 0.42
PDCD6-211ENST00000515587 TMTC2Q8N394 836 aa17.67■□□□□ 0.42
PDCD6-211ENST00000515587 PNMA1Q8ND90 353 aa17.67■□□□□ 0.42
PDCD6-211ENST00000515587 PARK7Q99497 189 aaKnown RBP17.67■□□□□ 0.42
PDCD6-211ENST00000515587 TM6SF1Q9BZW5 370 aa17.67■□□□□ 0.42
PDCD6-211ENST00000515587 ZFYVE28Q9HCC9 887 aa17.67■□□□□ 0.42
PDCD6-211ENST00000515587 COLQQ9Y215 455 aaPredicted RBP17.67■□□□□ 0.42
PDCD6-211ENST00000515587 SEC23AQ15436 765 aa17.66■□□□□ 0.42
PDCD6-211ENST00000515587 NFXL1Q6ZNB6 911 aa17.66■□□□□ 0.42
PDCD6-211ENST00000515587 DCAF4Q8WV16 495 aa17.66■□□□□ 0.42
PDCD6-211ENST00000515587 GMCL1Q96IK5 515 aa17.66■□□□□ 0.42
PDCD6-211ENST00000515587 BACH2Q9BYV9 841 aa17.66■□□□□ 0.42
PDCD6-211ENST00000515587 C22orf23Q9BZE7 217 aa17.66■□□□□ 0.42
PDCD6-211ENST00000515587 MTMR7Q9Y216 660 aa17.66■□□□□ 0.42
PDCD6-211ENST00000515587 CYP46A1Q9Y6A2 500 aa17.66■□□□□ 0.42
PDCD6-211ENST00000515587 SLC1A4P43007 532 aa17.65■□□□□ 0.42
PDCD6-211ENST00000515587 EXOSC10Q01780 885 aaKnown RBP17.65■□□□□ 0.42
PDCD6-211ENST00000515587 KIAA1755Q5JYT7 1200 aa17.65■□□□□ 0.42
PDCD6-211ENST00000515587 FAM83BQ5T0W9 1011 aa17.65■□□□□ 0.42
PDCD6-211ENST00000515587 CATSPERGQ6ZRH7 1159 aa17.65■□□□□ 0.42
PDCD6-211ENST00000515587 IGDCC4Q8TDY8 1250 aa17.65■□□□□ 0.42
PDCD6-211ENST00000515587 SMCR8Q8TEV9 937 aaPredicted RBP17.65■□□□□ 0.42
PDCD6-211ENST00000515587 ASCC2Q9H1I8 757 aaPredicted RBP17.65■□□□□ 0.42
PDCD6-211ENST00000515587 R3HDMLQ9H3Y0 253 aa17.65■□□□□ 0.42
PDCD6-211ENST00000515587 CCDC69A6NI79 296 aa17.64■□□□□ 0.41
PDCD6-211ENST00000515587 SH2B2O14492 632 aaPredicted RBP17.64■□□□□ 0.41
PDCD6-211ENST00000515587 BMP3P12645 472 aa17.64■□□□□ 0.41
PDCD6-211ENST00000515587 RPS6KB1P23443 525 aa17.64■□□□□ 0.41
PDCD6-211ENST00000515587 LIFRP42702 1097 aa17.64■□□□□ 0.41
PDCD6-211ENST00000515587 IKQ13123 557 aaPredicted RBP17.64■□□□□ 0.41
PDCD6-211ENST00000515587 CCDC96Q2M329 555 aa17.64■□□□□ 0.41
PDCD6-211ENST00000515587 RUFY3Q7L099 469 aa17.64■□□□□ 0.41
PDCD6-211ENST00000515587 CATIPQ7Z7H3 387 aa17.64■□□□□ 0.41
PDCD6-211ENST00000515587 LY9Q9HBG7 655 aa17.64■□□□□ 0.41
PDCD6-211ENST00000515587 ZSWIM6Q9HCJ5 1215 aa17.64■□□□□ 0.41
PDCD6-211ENST00000515587 PARP14Q460N5 1801 aa17.63■□□□□ 0.41
PDCD6-211ENST00000515587 FLOT1O75955 427 aa17.63■□□□□ 0.41
PDCD6-211ENST00000515587 CYP2C8P10632 490 aa17.63■□□□□ 0.41
PDCD6-211ENST00000515587 CRHR2Q13324 411 aa17.63■□□□□ 0.41
PDCD6-211ENST00000515587 COG2Q14746 738 aa17.63■□□□□ 0.41
PDCD6-211ENST00000515587 NOM1Q5C9Z4 860 aaKnown RBP17.63■□□□□ 0.41
PDCD6-211ENST00000515587 SYNE3Q6ZMZ3 975 aa17.63■□□□□ 0.41
PDCD6-211ENST00000515587 GTF3C2Q8WUA4 911 aaPredicted RBP17.63■□□□□ 0.41
PDCD6-211ENST00000515587 CHMP4CQ96CF2 233 aa17.63■□□□□ 0.41
PDCD6-211ENST00000515587 TCEANC2Q96MN5 208 aa17.63■□□□□ 0.41
PDCD6-211ENST00000515587 NUP88Q99567 741 aaPredicted RBP17.63■□□□□ 0.41
PDCD6-211ENST00000515587 CFHR5Q9BXR6 569 aa17.63■□□□□ 0.41
PDCD6-211ENST00000515587 LRRC2Q9BYS8 371 aa17.63■□□□□ 0.41
PDCD6-211ENST00000515587 HOXC10Q9NYD6 342 aa17.63■□□□□ 0.41
PDCD6-211ENST00000515587 FEM1BQ9UK73 627 aa17.63■□□□□ 0.41
PDCD6-211ENST00000515587 FKTNO75072 461 aa17.62■□□□□ 0.41
PDCD6-211ENST00000515587 CPA1P15085 419 aa17.62■□□□□ 0.41
PDCD6-211ENST00000515587 GCLCP48506 637 aaPredicted RBP17.62■□□□□ 0.41
PDCD6-211ENST00000515587 SAMD1Q6SPF0 538 aaPredicted RBP17.62■□□□□ 0.41
PDCD6-211ENST00000515587 CHURC1Q8WUH1 139 aa17.62■□□□□ 0.41
PDCD6-211ENST00000515587 P2RX7Q99572 595 aaKnown RBP17.62■□□□□ 0.41
PDCD6-211ENST00000515587 TRIOBPQ9H2D6 2365 aa17.62■□□□□ 0.41
PDCD6-211ENST00000515587 TMEM232C9JQI7 657 aa17.61■□□□□ 0.41
PDCD6-211ENST00000515587 TLR2O60603 784 aa17.61■□□□□ 0.41
PDCD6-211ENST00000515587 PDHBP11177 359 aa17.61■□□□□ 0.41
PDCD6-211ENST00000515587 RBM25P49756 843 aaKnown RBP17.61■□□□□ 0.41
PDCD6-211ENST00000515587 STAT2P52630 851 aa17.61■□□□□ 0.41
PDCD6-211ENST00000515587 HERVK_113P62684 666 aa17.61■□□□□ 0.41
PDCD6-211ENST00000515587 GPATCH4Q5T3I0 446 aaKnown RBP17.61■□□□□ 0.41
PDCD6-211ENST00000515587 Q6ZUG5 572 aa17.61■□□□□ 0.41
PDCD6-211ENST00000515587 FAM160B2Q86V87 743 aa17.61■□□□□ 0.41
PDCD6-211ENST00000515587 IL17RAQ96F46 866 aa17.61■□□□□ 0.41
PDCD6-211ENST00000515587 SLF1Q9BQI6 1058 aa17.61■□□□□ 0.41
PDCD6-211ENST00000515587 UPF3BQ9BZI7 483 aaKnown RBP17.61■□□□□ 0.41
PDCD6-211ENST00000515587 GPHNQ9NQX3 736 aaPredicted RBP17.61■□□□□ 0.41
PDCD6-211ENST00000515587 PDRG1Q9NUG6 133 aa17.61■□□□□ 0.41
PDCD6-211ENST00000515587 CTDP1Q9Y5B0 961 aaPredicted RBP17.61■□□□□ 0.41
PDCD6-211ENST00000515587 SLC12A7Q9Y666 1083 aa17.61■□□□□ 0.41
PDCD6-211ENST00000515587 MYPNQ86TC9 1320 aa17.61■□□□□ 0.41
PDCD6-211ENST00000515587 KIAA0100Q14667 2235 aaKnown RBP17.6■□□□□ 0.41
PDCD6-211ENST00000515587 DDAH1O94760 285 aa17.6■□□□□ 0.41
PDCD6-211ENST00000515587 PARP1P09874 1014 aaKnown RBP17.6■□□□□ 0.41
PDCD6-211ENST00000515587 CALM1P0DP23 149 aa17.6■□□□□ 0.41
PDCD6-211ENST00000515587 CALM2P0DP24 149 aa17.6■□□□□ 0.41
PDCD6-211ENST00000515587 CALM3P0DP25 149 aa17.6■□□□□ 0.41
PDCD6-211ENST00000515587 EN2P19622 333 aaPredicted RBP17.6■□□□□ 0.41
PDCD6-211ENST00000515587 DSG3P32926 999 aa17.6■□□□□ 0.41
PDCD6-211ENST00000515587 COL9A3Q14050 684 aaPredicted RBP17.6■□□□□ 0.41
PDCD6-211ENST00000515587 ASPRV1Q53RT3 343 aa17.6■□□□□ 0.41
PDCD6-211ENST00000515587 KCTD1Q719H9 257 aa17.6■□□□□ 0.41
PDCD6-211ENST00000515587 SGMS1Q86VZ5 419 aa17.6■□□□□ 0.41
PDCD6-211ENST00000515587 ZNF654Q8IZM8 581 aa17.6■□□□□ 0.41
PDCD6-211ENST00000515587 PRPF38AQ8NAV1 312 aaKnown RBP17.6■□□□□ 0.41
PDCD6-211ENST00000515587 SENP2Q9HC62 589 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms