RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 C17orf99Q6UX52 265 aa13.96□□□□□ -0.17
SNF8-215ENST00000515572 LBX2Q6XYB7 198 aa13.96□□□□□ -0.17
SNF8-215ENST00000515572 DHX32Q7L7V1 743 aaKnown RBP13.96□□□□□ -0.17
SNF8-215ENST00000515572 TMTC2Q8N394 836 aa13.96□□□□□ -0.17
SNF8-215ENST00000515572 PNMA1Q8ND90 353 aa13.96□□□□□ -0.17
SNF8-215ENST00000515572 TSKSQ9UJT2 592 aa13.96□□□□□ -0.17
SNF8-215ENST00000515572 FLOT1O75955 427 aa13.95□□□□□ -0.18
SNF8-215ENST00000515572 SEC24BO95487 1268 aa13.95□□□□□ -0.18
SNF8-215ENST00000515572 BLOC1S2Q6QNY1 142 aa13.95□□□□□ -0.18
SNF8-215ENST00000515572 CHST3Q7LGC8 479 aa13.95□□□□□ -0.18
SNF8-215ENST00000515572 IGDCC4Q8TDY8 1250 aa13.95□□□□□ -0.18
SNF8-215ENST00000515572 JAKMIP1Q96N16 626 aaKnown RBP13.95□□□□□ -0.18
SNF8-215ENST00000515572 P2RX7Q99572 595 aaKnown RBP13.95□□□□□ -0.18
SNF8-215ENST00000515572 R3HDMLQ9H3Y0 253 aa13.95□□□□□ -0.18
SNF8-215ENST00000515572 FEM1BQ9UK73 627 aa13.95□□□□□ -0.18
SNF8-215ENST00000515572 MGAMO43451 1857 aa13.95□□□□□ -0.18
SNF8-215ENST00000515572 COL11A1P12107 1806 aaPredicted RBP13.94□□□□□ -0.18
SNF8-215ENST00000515572 SPDYE16A6NNV3 312 aaPredicted RBP13.94□□□□□ -0.18
SNF8-215ENST00000515572 PLA2G6O60733 806 aa13.94□□□□□ -0.18
SNF8-215ENST00000515572 FKTNO75072 461 aa13.94□□□□□ -0.18
SNF8-215ENST00000515572 SNHG28P0DPA3 235 aa13.94□□□□□ -0.18
SNF8-215ENST00000515572 PDHBP11177 359 aa13.94□□□□□ -0.18
SNF8-215ENST00000515572 BCRP11274 1271 aa13.94□□□□□ -0.18
SNF8-215ENST00000515572 DSG3P32926 999 aa13.94□□□□□ -0.18
SNF8-215ENST00000515572 LIFRP42702 1097 aa13.94□□□□□ -0.18
SNF8-215ENST00000515572 STAT2P52630 851 aa13.94□□□□□ -0.18
SNF8-215ENST00000515572 LBX1P52954 281 aa13.94□□□□□ -0.18
SNF8-215ENST00000515572 EXOSC10Q01780 885 aaKnown RBP13.94□□□□□ -0.18
SNF8-215ENST00000515572 SP3Q02447 781 aa13.94□□□□□ -0.18
SNF8-215ENST00000515572 FAM110CQ1W6H9 321 aa13.94□□□□□ -0.18
SNF8-215ENST00000515572 GPATCH4Q5T3I0 446 aaKnown RBP13.94□□□□□ -0.18
SNF8-215ENST00000515572 FAM160B2Q86V87 743 aa13.94□□□□□ -0.18
SNF8-215ENST00000515572 MB21D1Q8N884 522 aa13.94□□□□□ -0.18
SNF8-215ENST00000515572 PRPF38AQ8NAV1 312 aaKnown RBP13.94□□□□□ -0.18
SNF8-215ENST00000515572 CHURC1Q8WUH1 139 aa13.94□□□□□ -0.18
SNF8-215ENST00000515572 NUP88Q99567 741 aaPredicted RBP13.94□□□□□ -0.18
SNF8-215ENST00000515572 TM6SF1Q9BZW5 370 aa13.94□□□□□ -0.18
SNF8-215ENST00000515572 PRDM10Q9NQV6 1147 aa13.94□□□□□ -0.18
SNF8-215ENST00000515572 MORF4L1Q9UBU8 362 aa13.94□□□□□ -0.18
SNF8-215ENST00000515572 CPA4Q9UI42 421 aa13.94□□□□□ -0.18
SNF8-215ENST00000515572 RABGAP1Q9Y3P9 1069 aa13.94□□□□□ -0.18
SNF8-215ENST00000515572 CASP8AP2Q9UKL3 1982 aa13.94□□□□□ -0.18
SNF8-215ENST00000515572 SH2B2O14492 632 aaPredicted RBP13.93□□□□□ -0.18
SNF8-215ENST00000515572 FDX1P10109 184 aa13.93□□□□□ -0.18
SNF8-215ENST00000515572 CCDC96Q2M329 555 aa13.93□□□□□ -0.18
SNF8-215ENST00000515572 ASPRV1Q53RT3 343 aa13.93□□□□□ -0.18
SNF8-215ENST00000515572 CATIPQ7Z7H3 387 aa13.93□□□□□ -0.18
SNF8-215ENST00000515572 ANKRD13CQ8N6S4 541 aa13.93□□□□□ -0.18
SNF8-215ENST00000515572 ZNF296Q8WUU4 475 aaPredicted RBP13.93□□□□□ -0.18
SNF8-215ENST00000515572 ERO1AQ96HE7 468 aa13.93□□□□□ -0.18
SNF8-215ENST00000515572 SLF1Q9BQI6 1058 aa13.93□□□□□ -0.18
SNF8-215ENST00000515572 UPF2Q9HAU5 1272 aaKnown RBP13.93□□□□□ -0.18
SNF8-215ENST00000515572 LY9Q9HBG7 655 aa13.93□□□□□ -0.18
SNF8-215ENST00000515572 PPP1R9AQ9ULJ8 1098 aa13.93□□□□□ -0.18
SNF8-215ENST00000515572 ISY1Q9ULR0 285 aaKnown RBP13.93□□□□□ -0.18
SNF8-215ENST00000515572 ADAMTS5Q9UNA0 930 aa13.93□□□□□ -0.18
SNF8-215ENST00000515572 MTMR7Q9Y216 660 aa13.93□□□□□ -0.18
SNF8-215ENST00000515572 CCDC69A6NI79 296 aa13.92□□□□□ -0.18
SNF8-215ENST00000515572 TMEM232C9JQI7 657 aa13.92□□□□□ -0.18
SNF8-215ENST00000515572 CASTP20810 708 aaKnown RBP13.92□□□□□ -0.18
SNF8-215ENST00000515572 RPS6KB1P23443 525 aa13.92□□□□□ -0.18
SNF8-215ENST00000515572 ZNF543Q08ER8 600 aa13.92□□□□□ -0.18
SNF8-215ENST00000515572 KIF22Q14807 665 aa13.92□□□□□ -0.18
SNF8-215ENST00000515572 ARHGEF6Q15052 776 aa13.92□□□□□ -0.18
SNF8-215ENST00000515572 NFXL1Q6ZNB6 911 aa13.92□□□□□ -0.18
SNF8-215ENST00000515572 GPRC5AQ8NFJ5 357 aa13.92□□□□□ -0.18
SNF8-215ENST00000515572 IL17RAQ96F46 866 aa13.92□□□□□ -0.18
SNF8-215ENST00000515572 ZSWIM6Q9HCJ5 1215 aa13.92□□□□□ -0.18
SNF8-215ENST00000515572 FBXO28Q9NVF7 368 aa13.92□□□□□ -0.18
SNF8-215ENST00000515572 RBPJLQ9UBG7 517 aa13.92□□□□□ -0.18
SNF8-215ENST00000515572 VWA5AO00534 786 aa13.91□□□□□ -0.18
SNF8-215ENST00000515572 DDAH1O94760 285 aa13.91□□□□□ -0.18
SNF8-215ENST00000515572 CALM1P0DP23 149 aa13.91□□□□□ -0.18
SNF8-215ENST00000515572 CALM2P0DP24 149 aa13.91□□□□□ -0.18
SNF8-215ENST00000515572 CALM3P0DP25 149 aa13.91□□□□□ -0.18
SNF8-215ENST00000515572 CCNA1P78396 465 aa13.91□□□□□ -0.18
SNF8-215ENST00000515572 LACTBP83111 547 aaPredicted RBP13.91□□□□□ -0.18
SNF8-215ENST00000515572 FGD1P98174 961 aa13.91□□□□□ -0.18
SNF8-215ENST00000515572 IKQ13123 557 aaPredicted RBP13.91□□□□□ -0.18
SNF8-215ENST00000515572 COL9A3Q14050 684 aaPredicted RBP13.91□□□□□ -0.18
SNF8-215ENST00000515572 BTNL9Q6UXG8 535 aa13.91□□□□□ -0.18
SNF8-215ENST00000515572 KCTD1Q719H9 257 aa13.91□□□□□ -0.18
SNF8-215ENST00000515572 RUFY3Q7L099 469 aa13.91□□□□□ -0.18
SNF8-215ENST00000515572 SGMS1Q86VZ5 419 aa13.91□□□□□ -0.18
SNF8-215ENST00000515572 FBXL16Q8N461 479 aa13.91□□□□□ -0.18
SNF8-215ENST00000515572 KIFC2Q96AC6 838 aa13.91□□□□□ -0.18
SNF8-215ENST00000515572 ATG4CQ96DT6 458 aa13.91□□□□□ -0.18
SNF8-215ENST00000515572 MAP3K14Q99558 947 aa13.91□□□□□ -0.18
SNF8-215ENST00000515572 CYP46A1Q9Y6A2 500 aa13.91□□□□□ -0.18
SNF8-215ENST00000515572 PCNTO95613 3336 aa13.91□□□□□ -0.18
SNF8-215ENST00000515572 FRMPD2Q68DX3 1309 aaPredicted RBP13.9□□□□□ -0.18
SNF8-215ENST00000515572 GNRH1P01148 92 aa13.9□□□□□ -0.18
SNF8-215ENST00000515572 PARP1P09874 1014 aaKnown RBP13.9□□□□□ -0.18
SNF8-215ENST00000515572 ERVK-9P63128 1117 aa13.9□□□□□ -0.18
SNF8-215ENST00000515572 ERVK-24P63145 666 aa13.9□□□□□ -0.18
SNF8-215ENST00000515572 TROAPQ12815 778 aa13.9□□□□□ -0.18
SNF8-215ENST00000515572 GRM4Q14833 912 aa13.9□□□□□ -0.18
SNF8-215ENST00000515572 SYNE3Q6ZMZ3 975 aa13.9□□□□□ -0.18
SNF8-215ENST00000515572 ZNF654Q8IZM8 581 aa13.9□□□□□ -0.18
SNF8-215ENST00000515572 PAGR1Q9BTK6 254 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms