RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 PHF20Q9BVI0 1012 aa10.57□□□□□ -0.72
CPNE4-213ENST00000515418 GPRC5DQ9NZD1 345 aa10.57□□□□□ -0.72
CPNE4-213ENST00000515418 HERC5Q9UII4 1024 aaKnown RBP10.57□□□□□ -0.72
CPNE4-213ENST00000515418 RCOR1Q9UKL0 485 aa10.57□□□□□ -0.72
CPNE4-213ENST00000515418 A0A1W2PRG0 241 aa10.56□□□□□ -0.72
CPNE4-213ENST00000515418 FAM205CA6NFA0 338 aa10.56□□□□□ -0.72
CPNE4-213ENST00000515418 HIRAP54198 1017 aaPredicted RBP10.56□□□□□ -0.72
CPNE4-213ENST00000515418 ICA1Q05084 483 aa10.56□□□□□ -0.72
CPNE4-213ENST00000515418 SAFBQ15424 915 aaKnown RBP eCLIP10.56□□□□□ -0.72
CPNE4-213ENST00000515418 EARS2Q5JPH6 523 aaKnown RBP10.56□□□□□ -0.72
CPNE4-213ENST00000515418 TYW1BQ6NUM6 668 aa10.56□□□□□ -0.72
CPNE4-213ENST00000515418 ZNF396Q96N95 335 aaPredicted RBP10.56□□□□□ -0.72
CPNE4-213ENST00000515418 DEFB129Q9H1M3 183 aa10.56□□□□□ -0.72
CPNE4-213ENST00000515418 ISY1Q9ULR0 285 aaKnown RBP10.56□□□□□ -0.72
CPNE4-213ENST00000515418 XBP1P17861 261 aa10.56□□□□□ -0.72
CPNE4-213ENST00000515418 ATP2B1P20020 1258 aa10.56□□□□□ -0.72
CPNE4-213ENST00000515418 NPY5RQ15761 445 aa10.56□□□□□ -0.72
CPNE4-213ENST00000515418 CSPP1Q1MSJ5 1256 aa10.56□□□□□ -0.72
CPNE4-213ENST00000515418 C9orf131Q5VYM1 1079 aa10.56□□□□□ -0.72
CPNE4-213ENST00000515418 CCDC84Q86UT8 332 aaPredicted RBP10.56□□□□□ -0.72
CPNE4-213ENST00000515418 NOSTRINQ8IVI9 506 aa10.56□□□□□ -0.72
CPNE4-213ENST00000515418 MKL1Q969V6 931 aa10.56□□□□□ -0.72
CPNE4-213ENST00000515418 PIGSQ96S52 555 aa10.56□□□□□ -0.72
CPNE4-213ENST00000515418 NUP88Q99567 741 aaPredicted RBP10.56□□□□□ -0.72
CPNE4-213ENST00000515418 CABP5Q9NP86 173 aa10.56□□□□□ -0.72
CPNE4-213ENST00000515418 PLSCR2Q9NRY7 297 aa10.56□□□□□ -0.72
CPNE4-213ENST00000515418 NYAP2Q9P242 653 aa10.56□□□□□ -0.72
CPNE4-213ENST00000515418 FZD1Q9UP38 647 aa10.56□□□□□ -0.72
CPNE4-213ENST00000515418 COL2A1P02458 1487 aaPredicted RBP10.55□□□□□ -0.72
CPNE4-213ENST00000515418 GOLGA6L4A6NEF3 574 aa10.55□□□□□ -0.72
CPNE4-213ENST00000515418 MBD3O95983 291 aa10.55□□□□□ -0.72
CPNE4-213ENST00000515418 SNHG28P0DPA3 235 aa10.55□□□□□ -0.72
CPNE4-213ENST00000515418 ECE1P42892 770 aa10.55□□□□□ -0.72
CPNE4-213ENST00000515418 TNNI2P48788 182 aa10.55□□□□□ -0.72
CPNE4-213ENST00000515418 TOB1P50616 345 aaPredicted RBP10.55□□□□□ -0.72
CPNE4-213ENST00000515418 NLRP5P59047 1200 aa10.55□□□□□ -0.72
CPNE4-213ENST00000515418 ZNF543Q08ER8 600 aa10.55□□□□□ -0.72
CPNE4-213ENST00000515418 NBPF12Q5TAG4 269 aaPredicted RBP10.55□□□□□ -0.72
CPNE4-213ENST00000515418 ANGEL2Q5VTE6 544 aaKnown RBP10.55□□□□□ -0.72
CPNE4-213ENST00000515418 SLFN13Q68D06 897 aa10.55□□□□□ -0.72
CPNE4-213ENST00000515418 WWC2Q6AWC2 1192 aa10.55□□□□□ -0.72
CPNE4-213ENST00000515418 DLK2Q6UY11 383 aa10.55□□□□□ -0.72
CPNE4-213ENST00000515418 HEATR3Q7Z4Q2 680 aa10.55□□□□□ -0.72
CPNE4-213ENST00000515418 RGS22Q8NE09 1264 aa10.55□□□□□ -0.72
CPNE4-213ENST00000515418 ACER1Q8TDN7 264 aa10.55□□□□□ -0.72
CPNE4-213ENST00000515418 LZTS2Q9BRK4 669 aa10.55□□□□□ -0.72
CPNE4-213ENST00000515418 FOXP1Q9H334 677 aaPredicted RBP10.55□□□□□ -0.72
CPNE4-213ENST00000515418 RTEL1Q9NZ71 1219 aa10.55□□□□□ -0.72
CPNE4-213ENST00000515418 ELP1O95163 1332 aa10.55□□□□□ -0.72
CPNE4-213ENST00000515418 F5H6K3 240 aa10.54□□□□□ -0.72
CPNE4-213ENST00000515418 TBC1D12O60347 775 aa10.54□□□□□ -0.72
CPNE4-213ENST00000515418 LIG1P18858 919 aa10.54□□□□□ -0.72
CPNE4-213ENST00000515418 MMP14P50281 582 aa10.54□□□□□ -0.72
CPNE4-213ENST00000515418 KLRC3Q07444 240 aa10.54□□□□□ -0.72
CPNE4-213ENST00000515418 SF3A1Q15459 793 aaKnown RBP10.54□□□□□ -0.72
CPNE4-213ENST00000515418 GPR162Q16538 588 aa10.54□□□□□ -0.72
CPNE4-213ENST00000515418 CCDC96Q2M329 555 aa10.54□□□□□ -0.72
CPNE4-213ENST00000515418 ZSCAN23Q3MJ62 389 aa10.54□□□□□ -0.72
CPNE4-213ENST00000515418 KIAA1755Q5JYT7 1200 aa10.54□□□□□ -0.72
CPNE4-213ENST00000515418 ANO1Q5XXA6 986 aa10.54□□□□□ -0.72
CPNE4-213ENST00000515418 ADGRF4Q8IZF3 695 aa10.54□□□□□ -0.72
CPNE4-213ENST00000515418 SPICE1Q8N0Z3 855 aa10.54□□□□□ -0.72
CPNE4-213ENST00000515418 LINC00301Q8NCQ3 95 aa10.54□□□□□ -0.72
CPNE4-213ENST00000515418 SPZ1Q9BXG8 430 aa10.54□□□□□ -0.72
CPNE4-213ENST00000515418 PHF20L1A8MW92 1017 aa10.54□□□□□ -0.72
CPNE4-213ENST00000515418 MARCKSP29966 332 aaPredicted RBP10.54□□□□□ -0.72
CPNE4-213ENST00000515418 KRT2P35908 639 aa10.54□□□□□ -0.72
CPNE4-213ENST00000515418 CAP2P40123 477 aa10.54□□□□□ -0.72
CPNE4-213ENST00000515418 SLC1A4P43007 532 aa10.54□□□□□ -0.72
CPNE4-213ENST00000515418 ME1P48163 572 aa10.54□□□□□ -0.72
CPNE4-213ENST00000515418 MAP3K10Q02779 954 aa10.54□□□□□ -0.72
CPNE4-213ENST00000515418 TNFAIP1Q13829 316 aa10.54□□□□□ -0.72
CPNE4-213ENST00000515418 STK38Q15208 465 aa10.54□□□□□ -0.72
CPNE4-213ENST00000515418 ASPRV1Q53RT3 343 aa10.54□□□□□ -0.72
CPNE4-213ENST00000515418 ATL3Q6DD88 541 aa10.54□□□□□ -0.72
CPNE4-213ENST00000515418 RRP36Q96EU6 259 aaKnown RBP10.54□□□□□ -0.72
CPNE4-213ENST00000515418 GLIS2Q9BZE0 524 aaPredicted RBP10.54□□□□□ -0.72
CPNE4-213ENST00000515418 RIOX1Q9H6W3 641 aa10.54□□□□□ -0.72
CPNE4-213ENST00000515418 JMJD4Q9H9V9 463 aa10.54□□□□□ -0.72
CPNE4-213ENST00000515418 ZBTB21Q9ULJ3 1066 aa10.54□□□□□ -0.72
CPNE4-213ENST00000515418 PCDHA7Q9UN72 937 aa10.54□□□□□ -0.72
CPNE4-213ENST00000515418 USP17L10C9JJH3 530 aa10.53□□□□□ -0.72
CPNE4-213ENST00000515418 STXBP3O00186 592 aa10.53□□□□□ -0.72
CPNE4-213ENST00000515418 NDUFB10O96000 172 aa10.53□□□□□ -0.72
CPNE4-213ENST00000515418 SNAP25P60880 206 aa10.53□□□□□ -0.72
CPNE4-213ENST00000515418 ZYXQ15942 572 aaKnown RBP10.53□□□□□ -0.72
CPNE4-213ENST00000515418 GAS2L3Q86XJ1 694 aa10.53□□□□□ -0.72
CPNE4-213ENST00000515418 RASGRP4Q8TDF6 673 aa10.53□□□□□ -0.72
CPNE4-213ENST00000515418 COA7Q96BR5 231 aa10.53□□□□□ -0.72
CPNE4-213ENST00000515418 POLR3EQ9NVU0 708 aa10.53□□□□□ -0.72
CPNE4-213ENST00000515418 BARHL2Q9NY43 387 aa10.53□□□□□ -0.72
CPNE4-213ENST00000515418 PCDHB6Q9Y5E3 794 aa10.53□□□□□ -0.72
CPNE4-213ENST00000515418 WNT7AO00755 349 aa10.52□□□□□ -0.72
CPNE4-213ENST00000515418 SPTLC2O15270 562 aa10.52□□□□□ -0.72
CPNE4-213ENST00000515418 DEKP35659 375 aaKnown RBP10.52□□□□□ -0.72
CPNE4-213ENST00000515418 NASPP49321 788 aaPredicted RBP10.52□□□□□ -0.72
CPNE4-213ENST00000515418 GGA3Q9NZ52 723 aa10.52□□□□□ -0.72
CPNE4-213ENST00000515418 SMCHD1A6NHR9 2005 aa10.52□□□□□ -0.73
CPNE4-213ENST00000515418 SYCE3A1L190 88 aa10.52□□□□□ -0.73
CPNE4-213ENST00000515418 PPP1R11O60927 126 aaPredicted RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms