RNA–Protein interactions for RNA: ENST00000514934.1

SGCA-211, Transcript of sarcoglycan alpha, humanhuman

TSL 4

Gene SGCA, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-211ENST00000514934 SH2D4AQ9H788 454 aa17.51■□□□□ 0.39
SGCA-211ENST00000514934 OGDHLQ9ULD0 1010 aa17.51■□□□□ 0.39
SGCA-211ENST00000514934 H0YGN5 161 aa17.5■□□□□ 0.39
SGCA-211ENST00000514934 FLOT1O75955 427 aa17.5■□□□□ 0.39
SGCA-211ENST00000514934 CAPN2P17655 700 aa17.5■□□□□ 0.39
SGCA-211ENST00000514934 CCND3P30281 292 aaPredicted RBP17.5■□□□□ 0.39
SGCA-211ENST00000514934 PPARAQ07869 468 aa17.5■□□□□ 0.39
SGCA-211ENST00000514934 LRRFIP1Q32MZ4 808 aaKnown RBP17.5■□□□□ 0.39
SGCA-211ENST00000514934 TICAM2Q86XR7 235 aa17.5■□□□□ 0.39
SGCA-211ENST00000514934 MB21D1Q8N884 522 aa17.5■□□□□ 0.39
SGCA-211ENST00000514934 TRPV1Q8NER1 839 aa17.5■□□□□ 0.39
SGCA-211ENST00000514934 CEP95Q96GE4 821 aa17.5■□□□□ 0.39
SGCA-211ENST00000514934 NUP88Q99567 741 aaPredicted RBP17.5■□□□□ 0.39
SGCA-211ENST00000514934 HMX1Q9NP08 348 aaPredicted RBP17.5■□□□□ 0.39
SGCA-211ENST00000514934 MTMR4Q9NYA4 1195 aa17.5■□□□□ 0.39
SGCA-211ENST00000514934 ZNF214Q9UL59 606 aaPredicted RBP17.5■□□□□ 0.39
SGCA-211ENST00000514934 LRRC37A2A6NM11 1700 aa17.5■□□□□ 0.39
SGCA-211ENST00000514934 COBLO75128 1261 aa17.49■□□□□ 0.39
SGCA-211ENST00000514934 NDUFB10O96000 172 aa17.49■□□□□ 0.39
SGCA-211ENST00000514934 FGRP09769 529 aa17.49■□□□□ 0.39
SGCA-211ENST00000514934 ZKSCAN1P17029 563 aaPredicted RBP17.49■□□□□ 0.39
SGCA-211ENST00000514934 ERCC3P19447 782 aa17.49■□□□□ 0.39
SGCA-211ENST00000514934 NOVP48745 357 aa17.49■□□□□ 0.39
SGCA-211ENST00000514934 ALX1Q15699 326 aa17.49■□□□□ 0.39
SGCA-211ENST00000514934 FAM83BQ5T0W9 1011 aa17.49■□□□□ 0.39
SGCA-211ENST00000514934 ZNF589Q86UQ0 364 aaPredicted RBP17.49■□□□□ 0.39
SGCA-211ENST00000514934 CHD1LQ86WJ1 897 aa17.49■□□□□ 0.39
SGCA-211ENST00000514934 TRMT44Q8IYL2 757 aaKnown RBP17.49■□□□□ 0.39
SGCA-211ENST00000514934 NEDD1Q8NHV4 660 aa17.49■□□□□ 0.39
SGCA-211ENST00000514934 PRO3102Q9H379 93 aa17.49■□□□□ 0.39
SGCA-211ENST00000514934 INCENPQ9NQS7 918 aa17.49■□□□□ 0.39
SGCA-211ENST00000514934 ANAPC4Q9UJX5 808 aa17.49■□□□□ 0.39
SGCA-211ENST00000514934 PPP1R9AQ9ULJ8 1098 aa17.49■□□□□ 0.39
SGCA-211ENST00000514934 F5H6K3 240 aa17.48■□□□□ 0.39
SGCA-211ENST00000514934 VWA5AO00534 786 aa17.48■□□□□ 0.39
SGCA-211ENST00000514934 KLRC3Q07444 240 aa17.48■□□□□ 0.39
SGCA-211ENST00000514934 ANKLE1Q8NAG6 615 aa17.48■□□□□ 0.39
SGCA-211ENST00000514934 NBPF3Q9H094 633 aa17.48■□□□□ 0.39
SGCA-211ENST00000514934 IL17RBQ9NRM6 502 aa17.48■□□□□ 0.39
SGCA-211ENST00000514934 APPP05067 770 aa17.47■□□□□ 0.39
SGCA-211ENST00000514934 COL6A1P12109 1028 aa17.47■□□□□ 0.39
SGCA-211ENST00000514934 ADORA2AP29274 412 aa17.47■□□□□ 0.39
SGCA-211ENST00000514934 ATP2B2Q01814 1243 aa17.47■□□□□ 0.39
SGCA-211ENST00000514934 HABP4Q5JVS0 413 aaKnown RBP17.47■□□□□ 0.39
SGCA-211ENST00000514934 PAWRQ96IZ0 340 aaKnown RBP17.47■□□□□ 0.39
SGCA-211ENST00000514934 NAPBQ9H115 298 aa17.47■□□□□ 0.39
SGCA-211ENST00000514934 RWDD1Q9H446 243 aaPredicted RBP17.47■□□□□ 0.39
SGCA-211ENST00000514934 MKNK2Q9HBH9 465 aa17.47■□□□□ 0.39
SGCA-211ENST00000514934 GOPCQ9HD26 462 aa17.47■□□□□ 0.39
SGCA-211ENST00000514934 HELLSQ9NRZ9 838 aa17.47■□□□□ 0.39
SGCA-211ENST00000514934 SYNPO2Q9UMS6 1093 aa17.47■□□□□ 0.39
SGCA-211ENST00000514934 SUPT16HQ9Y5B9 1047 aaKnown RBP17.47■□□□□ 0.39
SGCA-211ENST00000514934 LTBP2Q14767 1821 aa17.47■□□□□ 0.39
SGCA-211ENST00000514934 PFASO15067 1338 aa17.47■□□□□ 0.39
SGCA-211ENST00000514934 ZMYM6O95789 1325 aa17.47■□□□□ 0.39
SGCA-211ENST00000514934 TFRCP02786 760 aaKnown RBP17.46■□□□□ 0.39
SGCA-211ENST00000514934 CYBAP13498 195 aa17.46■□□□□ 0.39
SGCA-211ENST00000514934 CTDSPL2Q05D32 466 aa17.46■□□□□ 0.39
SGCA-211ENST00000514934 NMIQ13287 307 aaPredicted RBP17.46■□□□□ 0.39
SGCA-211ENST00000514934 B4GALNT3Q6L9W6 998 aa17.46■□□□□ 0.39
SGCA-211ENST00000514934 RIOX2Q8IUF8 465 aa17.46■□□□□ 0.39
SGCA-211ENST00000514934 ABRAQ8N0Z2 381 aa17.46■□□□□ 0.39
SGCA-211ENST00000514934 GMCL1P1Q8NEA9 526 aa17.46■□□□□ 0.39
SGCA-211ENST00000514934 NACAP1Q9BZK3 213 aa17.46■□□□□ 0.39
SGCA-211ENST00000514934 MROH8Q9H579 483 aa17.46■□□□□ 0.39
SGCA-211ENST00000514934 STRNO43815 780 aa17.45■□□□□ 0.38
SGCA-211ENST00000514934 PDE4AP27815 886 aa17.45■□□□□ 0.38
SGCA-211ENST00000514934 FAM47AQ5JRC9 791 aa17.45■□□□□ 0.38
SGCA-211ENST00000514934 OLFML2BQ68BL8 750 aa17.45■□□□□ 0.38
SGCA-211ENST00000514934 CLIP2Q9UDT6 1046 aa17.45■□□□□ 0.38
SGCA-211ENST00000514934 MYH6P13533 1939 aa17.45■□□□□ 0.38
SGCA-211ENST00000514934 ATP2A1O14983 1001 aa17.44■□□□□ 0.38
SGCA-211ENST00000514934 ORC4O43929 436 aa17.44■□□□□ 0.38
SGCA-211ENST00000514934 TTLL1O95922 423 aa17.44■□□□□ 0.38
SGCA-211ENST00000514934 FGAP02671 866 aa17.44■□□□□ 0.38
SGCA-211ENST00000514934 HSPD1P10809 573 aaKnown RBP17.44■□□□□ 0.38
SGCA-211ENST00000514934 CYP2C19P33261 490 aa17.44■□□□□ 0.38
SGCA-211ENST00000514934 TFAP4Q01664 338 aa17.44■□□□□ 0.38
SGCA-211ENST00000514934 MCMDC2Q4G0Z9 681 aa17.44■□□□□ 0.38
SGCA-211ENST00000514934 WDR78Q5VTH9 848 aa17.44■□□□□ 0.38
SGCA-211ENST00000514934 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.44■□□□□ 0.38
SGCA-211ENST00000514934 CCAR1Q8IX12 1150 aaKnown RBP17.44■□□□□ 0.38
SGCA-211ENST00000514934 ZNF444Q8N0Y2 327 aaPredicted RBP17.44■□□□□ 0.38
SGCA-211ENST00000514934 LRRC47Q8N1G4 583 aaKnown RBP17.44■□□□□ 0.38
SGCA-211ENST00000514934 COLQQ9Y215 455 aaPredicted RBP17.44■□□□□ 0.38
SGCA-211ENST00000514934 RIPK3Q9Y572 518 aa17.44■□□□□ 0.38
SGCA-211ENST00000514934 NMT2O60551 498 aa17.43■□□□□ 0.38
SGCA-211ENST00000514934 PDE4BQ07343 736 aa17.43■□□□□ 0.38
SGCA-211ENST00000514934 RASGRP2Q7LDG7 609 aa17.43■□□□□ 0.38
SGCA-211ENST00000514934 SLF1Q9BQI6 1058 aa17.43■□□□□ 0.38
SGCA-211ENST00000514934 IVNS1ABPQ9Y6Y0 642 aa17.43■□□□□ 0.38
SGCA-211ENST00000514934 CCDC171Q6TFL3 1326 aa17.43■□□□□ 0.38
SGCA-211ENST00000514934 SLC25A27O95847 323 aa17.42■□□□□ 0.38
SGCA-211ENST00000514934 SDSP20132 328 aa17.42■□□□□ 0.38
SGCA-211ENST00000514934 PLS1Q14651 629 aa17.42■□□□□ 0.38
SGCA-211ENST00000514934 NECAB2Q7Z6G3 386 aa17.42■□□□□ 0.38
SGCA-211ENST00000514934 NCAPG2Q86XI2 1143 aa17.42■□□□□ 0.38
SGCA-211ENST00000514934 MAML3Q96JK9 1138 aa17.42■□□□□ 0.38
SGCA-211ENST00000514934 FGD4Q96M96 766 aa17.42■□□□□ 0.38
SGCA-211ENST00000514934 HTATIP2Q9BUP3 242 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms