RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 CNNM1Q9NRU3 951 aa8.41□□□□□ -1.06
PDLIM5-219ENST00000514743 DDX19AQ9NUU7 478 aaKnown RBP8.41□□□□□ -1.06
PDLIM5-219ENST00000514743 RCOR1Q9UKL0 485 aa8.41□□□□□ -1.06
PDLIM5-219ENST00000514743 WDR19Q8NEZ3 1342 aa8.41□□□□□ -1.06
PDLIM5-219ENST00000514743 DLEC1Q9Y238 1755 aa8.41□□□□□ -1.06
PDLIM5-219ENST00000514743 PRC1O43663 620 aa8.41□□□□□ -1.06
PDLIM5-219ENST00000514743 MYCLP1P12525 358 aaPredicted RBP8.41□□□□□ -1.06
PDLIM5-219ENST00000514743 IBSPP21815 317 aaPredicted RBP8.41□□□□□ -1.06
PDLIM5-219ENST00000514743 EIF4BP23588 611 aaKnown RBP8.41□□□□□ -1.06
PDLIM5-219ENST00000514743 FAM200AQ8TCP9 573 aa8.41□□□□□ -1.06
PDLIM5-219ENST00000514743 NUP133Q8WUM0 1156 aa8.41□□□□□ -1.06
PDLIM5-219ENST00000514743 KAT2BQ92831 832 aa8.41□□□□□ -1.06
PDLIM5-219ENST00000514743 TRIM4Q9C037 500 aa8.41□□□□□ -1.06
PDLIM5-219ENST00000514743 TNMDQ9H2S6 317 aa8.41□□□□□ -1.06
PDLIM5-219ENST00000514743 ZNF215Q9UL58 517 aaPredicted RBP8.41□□□□□ -1.06
PDLIM5-219ENST00000514743 WWC3Q9ULE0 1092 aa8.41□□□□□ -1.06
PDLIM5-219ENST00000514743 COL24A1Q17RW2 1714 aa8.4□□□□□ -1.06
PDLIM5-219ENST00000514743 NPHP1O15259 732 aa8.4□□□□□ -1.06
PDLIM5-219ENST00000514743 SNW1Q13573 536 aaKnown RBP8.4□□□□□ -1.06
PDLIM5-219ENST00000514743 UBE3CQ15386 1083 aa8.4□□□□□ -1.06
PDLIM5-219ENST00000514743 NYAP1Q6ZVC0 841 aa8.4□□□□□ -1.06
PDLIM5-219ENST00000514743 TMC6Q7Z403 805 aa8.4□□□□□ -1.06
PDLIM5-219ENST00000514743 FAM81AQ8TBF8 368 aa8.4□□□□□ -1.06
PDLIM5-219ENST00000514743 MAPK8IP1Q9UQF2 711 aa8.4□□□□□ -1.06
PDLIM5-219ENST00000514743 MYH6P13533 1939 aa8.4□□□□□ -1.06
PDLIM5-219ENST00000514743 CAMTA2O94983 1202 aa8.4□□□□□ -1.07
PDLIM5-219ENST00000514743 SLC9C2Q5TAH2 1124 aa8.4□□□□□ -1.07
PDLIM5-219ENST00000514743 MICALCLQ6ZW33 695 aa8.4□□□□□ -1.07
PDLIM5-219ENST00000514743 CCDC80Q76M96 950 aa8.4□□□□□ -1.07
PDLIM5-219ENST00000514743 SDCCAG8Q86SQ7 713 aaPredicted RBP8.4□□□□□ -1.07
PDLIM5-219ENST00000514743 LUZP1Q86V48 1076 aa8.4□□□□□ -1.07
PDLIM5-219ENST00000514743 DZIP1Q86YF9 867 aaKnown RBP8.4□□□□□ -1.07
PDLIM5-219ENST00000514743 CCDC65Q8IXS2 484 aa8.4□□□□□ -1.07
PDLIM5-219ENST00000514743 CFAP45Q9UL16 551 aa8.4□□□□□ -1.07
PDLIM5-219ENST00000514743 ZNF532Q9HCE3 1301 aa8.4□□□□□ -1.07
PDLIM5-219ENST00000514743 GOLGA6L19H0YKK7 550 aa8.39□□□□□ -1.07
PDLIM5-219ENST00000514743 SNAP23O00161 211 aa8.39□□□□□ -1.07
PDLIM5-219ENST00000514743 CREB3O43889 395 aa8.39□□□□□ -1.07
PDLIM5-219ENST00000514743 SCNN1BP51168 640 aa8.39□□□□□ -1.07
PDLIM5-219ENST00000514743 GUCY1B3Q02153 619 aa8.39□□□□□ -1.07
PDLIM5-219ENST00000514743 ITPK1Q13572 414 aa8.39□□□□□ -1.07
PDLIM5-219ENST00000514743 PUM3Q15397 648 aaKnown RBP8.39□□□□□ -1.07
PDLIM5-219ENST00000514743 ANO6Q4KMQ2 910 aa8.39□□□□□ -1.07
PDLIM5-219ENST00000514743 FOXR1Q6PIV2 292 aa8.39□□□□□ -1.07
PDLIM5-219ENST00000514743 OLFML1Q6UWY5 402 aa8.39□□□□□ -1.07
PDLIM5-219ENST00000514743 CYB5R4Q7L1T6 521 aa8.39□□□□□ -1.07
PDLIM5-219ENST00000514743 IQCA1Q86XH1 822 aa8.39□□□□□ -1.07
PDLIM5-219ENST00000514743 MARCH10Q8NA82 808 aaPredicted RBP8.39□□□□□ -1.07
PDLIM5-219ENST00000514743 ENGASEQ8NFI3 743 aa8.39□□□□□ -1.07
PDLIM5-219ENST00000514743 NCOA7Q8NI08 942 aa8.39□□□□□ -1.07
PDLIM5-219ENST00000514743 KCNF1Q9H3M0 494 aa8.39□□□□□ -1.07
PDLIM5-219ENST00000514743 ZCCHC17Q9NP64 241 aaKnown RBP8.39□□□□□ -1.07
PDLIM5-219ENST00000514743 PSD3Q9NYI0 1048 aa8.39□□□□□ -1.07
PDLIM5-219ENST00000514743 TACC3Q9Y6A5 838 aa8.39□□□□□ -1.07
PDLIM5-219ENST00000514743 MROH5Q6ZUA9 1318 aa8.39□□□□□ -1.07
PDLIM5-219ENST00000514743 KLF18A0A0U1RQI7 1052 aa8.39□□□□□ -1.07
PDLIM5-219ENST00000514743 GOLGA6L4A6NEF3 574 aa8.39□□□□□ -1.07
PDLIM5-219ENST00000514743 ZNF213O14771 459 aa8.39□□□□□ -1.07
PDLIM5-219ENST00000514743 E2F6O75461 281 aa8.39□□□□□ -1.07
PDLIM5-219ENST00000514743 TPPPO94811 219 aa8.39□□□□□ -1.07
PDLIM5-219ENST00000514743 PDE6AP16499 860 aa8.39□□□□□ -1.07
PDLIM5-219ENST00000514743 CRKLP46109 303 aaKnown RBP8.39□□□□□ -1.07
PDLIM5-219ENST00000514743 MRPL12P52815 198 aaKnown RBP8.39□□□□□ -1.07
PDLIM5-219ENST00000514743 TTF1Q15361 905 aaPredicted RBP8.39□□□□□ -1.07
PDLIM5-219ENST00000514743 FXNQ16595 210 aa8.39□□□□□ -1.07
PDLIM5-219ENST00000514743 FILIP1LQ4L180 1135 aa8.39□□□□□ -1.07
PDLIM5-219ENST00000514743 FBXW10Q5XX13 1052 aa8.39□□□□□ -1.07
PDLIM5-219ENST00000514743 KLHL10Q6JEL2 608 aa8.39□□□□□ -1.07
PDLIM5-219ENST00000514743 HOOK3Q86VS8 718 aa8.39□□□□□ -1.07
PDLIM5-219ENST00000514743 LPIN2Q92539 896 aa8.39□□□□□ -1.07
PDLIM5-219ENST00000514743 ERO1AQ96HE7 468 aa8.39□□□□□ -1.07
PDLIM5-219ENST00000514743 AGBL1Q96MI9 1066 aa8.39□□□□□ -1.07
PDLIM5-219ENST00000514743 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.39□□□□□ -1.07
PDLIM5-219ENST00000514743 FAM107BQ9H098 131 aa8.39□□□□□ -1.07
PDLIM5-219ENST00000514743 CBX8Q9HC52 389 aa8.39□□□□□ -1.07
PDLIM5-219ENST00000514743 SEC31BQ9NQW1 1179 aa8.39□□□□□ -1.07
PDLIM5-219ENST00000514743 MKS1Q9NXB0 559 aa8.39□□□□□ -1.07
PDLIM5-219ENST00000514743 MAGEC2Q9UBF1 373 aaPredicted RBP8.39□□□□□ -1.07
PDLIM5-219ENST00000514743 MYO6Q9UM54 1294 aa8.39□□□□□ -1.07
PDLIM5-219ENST00000514743 NEDD4P46934 1319 aa8.39□□□□□ -1.07
PDLIM5-219ENST00000514743 RTL9Q8NET4 1388 aa8.39□□□□□ -1.07
PDLIM5-219ENST00000514743 BAZ2AQ9UIF9 1905 aaKnown RBP8.39□□□□□ -1.07
PDLIM5-219ENST00000514743 A0A087WWV3 80 aa8.39□□□□□ -1.07
PDLIM5-219ENST00000514743 DYTNA2CJ06 578 aa8.39□□□□□ -1.07
PDLIM5-219ENST00000514743 NTSR2O95665 410 aa8.39□□□□□ -1.07
PDLIM5-219ENST00000514743 MMEP08473 750 aa8.39□□□□□ -1.07
PDLIM5-219ENST00000514743 LIG3P49916 1009 aa8.39□□□□□ -1.07
PDLIM5-219ENST00000514743 DEUP1Q05D60 604 aa8.39□□□□□ -1.07
PDLIM5-219ENST00000514743 DHX8Q14562 1220 aaKnown RBP8.39□□□□□ -1.07
PDLIM5-219ENST00000514743 MIPOL1Q8TD10 442 aa8.39□□□□□ -1.07
PDLIM5-219ENST00000514743 BICD2Q8TD16 824 aa8.39□□□□□ -1.07
PDLIM5-219ENST00000514743 SPDL1Q96EA4 605 aa8.39□□□□□ -1.07
PDLIM5-219ENST00000514743 SENP2Q9HC62 589 aa8.39□□□□□ -1.07
PDLIM5-219ENST00000514743 EPB41L4AQ9HCS5 686 aaPredicted RBP8.39□□□□□ -1.07
PDLIM5-219ENST00000514743 CCDC87Q9NVE4 849 aa8.39□□□□□ -1.07
PDLIM5-219ENST00000514743 ZMYM6O95789 1325 aa8.39□□□□□ -1.07
PDLIM5-219ENST00000514743 LAMB1P07942 1786 aa8.39□□□□□ -1.07
PDLIM5-219ENST00000514743 SBF2Q86WG5 1849 aa8.38□□□□□ -1.07
PDLIM5-219ENST00000514743 GOLGA8BA8MQT2 603 aa8.38□□□□□ -1.07
PDLIM5-219ENST00000514743 RASGRF1Q13972 1273 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 508.8 ms