RNA–Protein interactions for RNA: ENST00000514335.1

NIPBL-208, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-208ENST00000514335 ARMC4Q5T2S8 1044 aa8.13□□□□□ -1.11
NIPBL-208ENST00000514335 NCCRP1Q6ZVX7 275 aaPredicted RBP8.13□□□□□ -1.11
NIPBL-208ENST00000514335 FBXO18Q8NFZ0 1043 aa8.13□□□□□ -1.11
NIPBL-208ENST00000514335 FAM167BQ9BTA0 163 aa8.13□□□□□ -1.11
NIPBL-208ENST00000514335 VCX3BQ9H321 246 aa8.13□□□□□ -1.11
NIPBL-208ENST00000514335 ZSCAN16Q9H4T2 348 aaPredicted RBP8.13□□□□□ -1.11
NIPBL-208ENST00000514335 ABCF3Q9NUQ8 709 aa8.13□□□□□ -1.11
NIPBL-208ENST00000514335 PIH1D1Q9NWS0 290 aaKnown RBP8.13□□□□□ -1.11
NIPBL-208ENST00000514335 SEPT10Q9P0V9 454 aa8.13□□□□□ -1.11
NIPBL-208ENST00000514335 PPP2R3BQ9Y5P8 575 aa8.13□□□□□ -1.11
NIPBL-208ENST00000514335 SBNO1A3KN83 1393 aa8.13□□□□□ -1.11
NIPBL-208ENST00000514335 TBC1D12O60347 775 aa8.13□□□□□ -1.11
NIPBL-208ENST00000514335 IDEP14735 1019 aa8.13□□□□□ -1.11
NIPBL-208ENST00000514335 NF2P35240 595 aa8.13□□□□□ -1.11
NIPBL-208ENST00000514335 PLEKHO1Q53GL0 409 aaPredicted RBP8.13□□□□□ -1.11
NIPBL-208ENST00000514335 FBXW10Q5XX13 1052 aa8.13□□□□□ -1.11
NIPBL-208ENST00000514335 THOC7Q6I9Y2 204 aaKnown RBP8.13□□□□□ -1.11
NIPBL-208ENST00000514335 GRAMD2AQ8IUY3 354 aa8.13□□□□□ -1.11
NIPBL-208ENST00000514335 RSAD2Q8WXG1 361 aa8.13□□□□□ -1.11
NIPBL-208ENST00000514335 KIF1BPQ96EK5 621 aa8.13□□□□□ -1.11
NIPBL-208ENST00000514335 SAAL1Q96ER3 474 aa8.13□□□□□ -1.11
NIPBL-208ENST00000514335 NGLY1Q96IV0 654 aa8.13□□□□□ -1.11
NIPBL-208ENST00000514335 DISC1Q9NRI5 854 aa8.13□□□□□ -1.11
NIPBL-208ENST00000514335 PCDH10Q9P2E7 1040 aa8.13□□□□□ -1.11
NIPBL-208ENST00000514335 MAP3K5Q99683 1374 aa8.12□□□□□ -1.11
NIPBL-208ENST00000514335 NUP188Q5SRE5 1749 aa8.12□□□□□ -1.11
NIPBL-208ENST00000514335 POM121CA8CG34 1229 aa8.12□□□□□ -1.11
NIPBL-208ENST00000514335 IL33O95760 270 aa8.12□□□□□ -1.11
NIPBL-208ENST00000514335 HSPA4P34932 840 aa8.12□□□□□ -1.11
NIPBL-208ENST00000514335 NUCB1Q02818 461 aa8.12□□□□□ -1.11
NIPBL-208ENST00000514335 BBS9Q3SYG4 887 aa8.12□□□□□ -1.11
NIPBL-208ENST00000514335 NAA16Q6N069 864 aaPredicted RBP8.12□□□□□ -1.11
NIPBL-208ENST00000514335 JAKMIP2Q96AA8 810 aa8.12□□□□□ -1.11
NIPBL-208ENST00000514335 TTC14Q96N46 770 aa8.12□□□□□ -1.11
NIPBL-208ENST00000514335 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.12□□□□□ -1.11
NIPBL-208ENST00000514335 SEMA4AQ9H3S1 761 aa8.12□□□□□ -1.11
NIPBL-208ENST00000514335 A1CFQ9NQ94 594 aaKnown RBP8.12□□□□□ -1.11
NIPBL-208ENST00000514335 STK39Q9UEW8 545 aa8.12□□□□□ -1.11
NIPBL-208ENST00000514335 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.12□□□□□ -1.11
NIPBL-208ENST00000514335 LUC7L2Q9Y383 392 aaKnown RBP8.12□□□□□ -1.11
NIPBL-208ENST00000514335 SOS2Q07890 1332 aaPredicted RBP8.12□□□□□ -1.11
NIPBL-208ENST00000514335 ORC4O43929 436 aa8.12□□□□□ -1.11
NIPBL-208ENST00000514335 ZBTB17Q13105 803 aa8.12□□□□□ -1.11
NIPBL-208ENST00000514335 SP140Q13342 867 aa8.12□□□□□ -1.11
NIPBL-208ENST00000514335 GIGYF2Q6Y7W6 1299 aaKnown RBP8.12□□□□□ -1.11
NIPBL-208ENST00000514335 CEP68Q76N32 757 aa8.12□□□□□ -1.11
NIPBL-208ENST00000514335 SYCP3Q8IZU3 236 aa8.12□□□□□ -1.11
NIPBL-208ENST00000514335 PPP1R14BQ96C90 147 aa8.12□□□□□ -1.11
NIPBL-208ENST00000514335 RBM41Q96IZ5 413 aaKnown RBP8.12□□□□□ -1.11
NIPBL-208ENST00000514335 C19orf44Q9H6X5 657 aa8.12□□□□□ -1.11
NIPBL-208ENST00000514335 KIAA1257Q9ULG3 409 aa8.12□□□□□ -1.11
NIPBL-208ENST00000514335 M0QX08 132 aa8.11□□□□□ -1.11
NIPBL-208ENST00000514335 PIP5K1CO60331 668 aa8.11□□□□□ -1.11
NIPBL-208ENST00000514335 CDC27P30260 824 aa8.11□□□□□ -1.11
NIPBL-208ENST00000514335 MRPL12P52815 198 aaKnown RBP8.11□□□□□ -1.11
NIPBL-208ENST00000514335 SCRN1Q12765 414 aa8.11□□□□□ -1.11
NIPBL-208ENST00000514335 SMC1AQ14683 1233 aaKnown RBP8.11□□□□□ -1.11
NIPBL-208ENST00000514335 LRRC23Q53EV4 343 aaPredicted RBP8.11□□□□□ -1.11
NIPBL-208ENST00000514335 CCDC122Q5T0U0 273 aa8.11□□□□□ -1.11
NIPBL-208ENST00000514335 ERAP2Q6P179 960 aa8.11□□□□□ -1.11
NIPBL-208ENST00000514335 PROM2Q8N271 834 aa8.11□□□□□ -1.11
NIPBL-208ENST00000514335 ZNF280CQ8ND82 737 aa8.11□□□□□ -1.11
NIPBL-208ENST00000514335 SMARCC2Q8TAQ2 1214 aa8.11□□□□□ -1.11
NIPBL-208ENST00000514335 RBM18Q96H35 190 aaKnown RBP8.11□□□□□ -1.11
NIPBL-208ENST00000514335 POLMQ9NP87 494 aaPredicted RBP8.11□□□□□ -1.11
NIPBL-208ENST00000514335 GPR108Q9NPR9 543 aa8.11□□□□□ -1.11
NIPBL-208ENST00000514335 ATP7BP35670 1465 aa8.11□□□□□ -1.11
NIPBL-208ENST00000514335 XPOTO43592 962 aaKnown RBP8.11□□□□□ -1.11
NIPBL-208ENST00000514335 ZSCAN22P10073 491 aaPredicted RBP8.11□□□□□ -1.11
NIPBL-208ENST00000514335 MXI1P50539 228 aa8.11□□□□□ -1.11
NIPBL-208ENST00000514335 ZNF746Q6NUN9 644 aaPredicted RBP8.11□□□□□ -1.11
NIPBL-208ENST00000514335 ABTB2Q8N961 1025 aa8.11□□□□□ -1.11
NIPBL-208ENST00000514335 CUL5Q93034 780 aa8.11□□□□□ -1.11
NIPBL-208ENST00000514335 PGBD4Q96DM1 585 aa8.11□□□□□ -1.11
NIPBL-208ENST00000514335 VPS50Q96JG6 964 aa8.11□□□□□ -1.11
NIPBL-208ENST00000514335 PDLIM2Q96JY6 352 aa8.11□□□□□ -1.11
NIPBL-208ENST00000514335 ANTXR1Q9H6X2 564 aa8.11□□□□□ -1.11
NIPBL-208ENST00000514335 TCF7L2Q9NQB0 619 aa8.11□□□□□ -1.11
NIPBL-208ENST00000514335 GOLGA6L10A0A0M3HER8 536 aa8.1□□□□□ -1.11
NIPBL-208ENST00000514335 A6NJY4 79 aa8.1□□□□□ -1.11
NIPBL-208ENST00000514335 AKR1B15C9JRZ8 316 aaPredicted RBP8.1□□□□□ -1.11
NIPBL-208ENST00000514335 RTCAO00442 366 aaKnown RBP8.1□□□□□ -1.11
NIPBL-208ENST00000514335 P4HA2O15460 535 aa8.1□□□□□ -1.11
NIPBL-208ENST00000514335 CUL4BQ13620 913 aa8.1□□□□□ -1.11
NIPBL-208ENST00000514335 TRIML2Q8N7C3 387 aa8.1□□□□□ -1.11
NIPBL-208ENST00000514335 GOT1L1Q8NHS2 421 aaPredicted RBP8.1□□□□□ -1.11
NIPBL-208ENST00000514335 ARHGAP45Q92619 1136 aa8.1□□□□□ -1.11
NIPBL-208ENST00000514335 C8orf48Q96LL4 319 aa8.1□□□□□ -1.11
NIPBL-208ENST00000514335 RBM14Q96PK6 669 aaKnown RBP8.1□□□□□ -1.11
NIPBL-208ENST00000514335 GLT8D2Q9H1C3 349 aa8.1□□□□□ -1.11
NIPBL-208ENST00000514335 LGR6Q9HBX8 967 aa8.1□□□□□ -1.11
NIPBL-208ENST00000514335 KRT82Q9NSB4 513 aa8.1□□□□□ -1.11
NIPBL-208ENST00000514335 FRMD3A2A2Y4 597 aa8.1□□□□□ -1.11
NIPBL-208ENST00000514335 RGS20O76081 388 aa8.1□□□□□ -1.11
NIPBL-208ENST00000514335 ATF7P17544 494 aaPredicted RBP8.1□□□□□ -1.11
NIPBL-208ENST00000514335 S100A5P33763 92 aa8.1□□□□□ -1.11
NIPBL-208ENST00000514335 TNNI2P48788 182 aa8.1□□□□□ -1.11
NIPBL-208ENST00000514335 PEX5P50542 639 aa8.1□□□□□ -1.11
NIPBL-208ENST00000514335 CAMK2BQ13554 666 aa8.1□□□□□ -1.11
NIPBL-208ENST00000514335 SLC10A5Q5PT55 438 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms