RNA–Protein interactions for RNA: ENST00000514006.1

CALCOCO2-222, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 500 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-222ENST00000514006 DDX1Q92499 740 aaKnown RBP6.8□□□□□ -1.32
CALCOCO2-222ENST00000514006 RCC1LQ96I51 464 aaKnown RBP6.8□□□□□ -1.32
CALCOCO2-222ENST00000514006 MRGPRX3Q96LB0 322 aa6.8□□□□□ -1.32
CALCOCO2-222ENST00000514006 GSX1Q9H4S2 264 aaPredicted RBP6.8□□□□□ -1.32
CALCOCO2-222ENST00000514006 GP6Q9HCN6 339 aa6.8□□□□□ -1.32
CALCOCO2-222ENST00000514006 NDOR1Q9UHB4 597 aa6.8□□□□□ -1.32
CALCOCO2-222ENST00000514006 PCOLCE2Q9UKZ9 415 aa6.8□□□□□ -1.32
CALCOCO2-222ENST00000514006 CEP131Q9UPN4 1083 aa6.8□□□□□ -1.32
CALCOCO2-222ENST00000514006 EMC9Q9Y3B6 208 aa6.8□□□□□ -1.32
CALCOCO2-222ENST00000514006 ACTL7BQ9Y614 415 aa6.8□□□□□ -1.32
CALCOCO2-222ENST00000514006 ERBB4Q15303 1308 aa6.79□□□□□ -1.32
CALCOCO2-222ENST00000514006 EFCAB14O75071 495 aa6.79□□□□□ -1.32
CALCOCO2-222ENST00000514006 TIAF1O95411 115 aa6.79□□□□□ -1.32
CALCOCO2-222ENST00000514006 CAPNS1P04632 268 aa6.79□□□□□ -1.32
CALCOCO2-222ENST00000514006 DDX46Q7L014 1031 aaKnown RBP6.79□□□□□ -1.32
CALCOCO2-222ENST00000514006 RIN3Q8TB24 985 aa6.79□□□□□ -1.32
CALCOCO2-222ENST00000514006 CCDC136Q96JN2 1154 aa6.79□□□□□ -1.32
CALCOCO2-222ENST00000514006 KREMEN1Q96MU8 473 aa6.79□□□□□ -1.32
CALCOCO2-222ENST00000514006 EID1Q9Y6B2 187 aa6.79□□□□□ -1.32
CALCOCO2-222ENST00000514006 LCE2BO14633 110 aa6.78□□□□□ -1.32
CALCOCO2-222ENST00000514006 SHOXO15266 292 aa6.78□□□□□ -1.32
CALCOCO2-222ENST00000514006 DNAJC8O75937 253 aaPredicted RBP6.78□□□□□ -1.32
CALCOCO2-222ENST00000514006 GUCY2FP51841 1108 aa6.78□□□□□ -1.32
CALCOCO2-222ENST00000514006 GABREP78334 506 aa6.78□□□□□ -1.32
CALCOCO2-222ENST00000514006 NOL9Q5SY16 702 aaKnown RBP6.78□□□□□ -1.32
CALCOCO2-222ENST00000514006 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.78□□□□□ -1.32
CALCOCO2-222ENST00000514006 BRAPQ7Z569 592 aa6.78□□□□□ -1.32
CALCOCO2-222ENST00000514006 ARHGEF39Q8N4T4 335 aa6.78□□□□□ -1.32
CALCOCO2-222ENST00000514006 DNAJB8Q8NHS0 232 aa6.78□□□□□ -1.32
CALCOCO2-222ENST00000514006 SLC7A14Q8TBB6 771 aa6.78□□□□□ -1.32
CALCOCO2-222ENST00000514006 LEO1Q8WVC0 666 aaPredicted RBP6.78□□□□□ -1.32
CALCOCO2-222ENST00000514006 BTN2A2Q8WVV5 523 aa6.78□□□□□ -1.32
CALCOCO2-222ENST00000514006 KCTD13Q8WZ19 329 aa6.78□□□□□ -1.32
CALCOCO2-222ENST00000514006 IRF7Q92985 503 aa6.78□□□□□ -1.32
CALCOCO2-222ENST00000514006 MRPL18Q9H0U6 180 aaKnown RBP6.78□□□□□ -1.32
CALCOCO2-222ENST00000514006 RRAGCQ9HB90 399 aa6.78□□□□□ -1.32
CALCOCO2-222ENST00000514006 TRIM39Q9HCM9 518 aa6.78□□□□□ -1.32
CALCOCO2-222ENST00000514006 FAM105AQ9NUU6 356 aa6.78□□□□□ -1.32
CALCOCO2-222ENST00000514006 CGGBP1Q9UFW8 167 aaPredicted RBP6.78□□□□□ -1.32
CALCOCO2-222ENST00000514006 FBXL21Q9UKT6 434 aa6.78□□□□□ -1.32
CALCOCO2-222ENST00000514006 THRAP3Q9Y2W1 955 aaKnown RBP6.78□□□□□ -1.32
CALCOCO2-222ENST00000514006 PCDHB12Q9Y5F1 795 aa6.78□□□□□ -1.32
CALCOCO2-222ENST00000514006 WASHC2CQ9Y4E1 1318 aa6.77□□□□□ -1.32
CALCOCO2-222ENST00000514006 A0A087WZG4 1122 aa6.77□□□□□ -1.33
CALCOCO2-222ENST00000514006 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.77□□□□□ -1.33
CALCOCO2-222ENST00000514006 TERTO14746 1132 aaKnown RBP6.77□□□□□ -1.33
CALCOCO2-222ENST00000514006 DLX3O60479 287 aa6.77□□□□□ -1.33
CALCOCO2-222ENST00000514006 KCNH1O95259 989 aa6.77□□□□□ -1.33
CALCOCO2-222ENST00000514006 C6orf222P0C671 652 aaPredicted RBP6.77□□□□□ -1.33
CALCOCO2-222ENST00000514006 SLURP2P0DP57 97 aa6.77□□□□□ -1.33
CALCOCO2-222ENST00000514006 ETV3P41162 512 aa6.77□□□□□ -1.33
CALCOCO2-222ENST00000514006 ANKRD34AQ69YU3 496 aa6.77□□□□□ -1.33
CALCOCO2-222ENST00000514006 LETMD1Q6P1Q0 360 aa6.77□□□□□ -1.33
CALCOCO2-222ENST00000514006 IGF2-ASQ6U949 168 aa6.77□□□□□ -1.33
CALCOCO2-222ENST00000514006 C2CD4AQ8NCU7 369 aaPredicted RBP6.77□□□□□ -1.33
CALCOCO2-222ENST00000514006 VWCEQ96DN2 955 aa6.77□□□□□ -1.33
CALCOCO2-222ENST00000514006 MIPEPQ99797 713 aa6.77□□□□□ -1.33
CALCOCO2-222ENST00000514006 ASPNQ9BXN1 380 aa6.77□□□□□ -1.33
CALCOCO2-222ENST00000514006 SLC52A2Q9HAB3 445 aa6.77□□□□□ -1.33
CALCOCO2-222ENST00000514006 OPA1O60313 960 aa6.76□□□□□ -1.33
CALCOCO2-222ENST00000514006 ALDH1L1O75891 902 aa6.76□□□□□ -1.33
CALCOCO2-222ENST00000514006 ASLP04424 464 aa6.76□□□□□ -1.33
CALCOCO2-222ENST00000514006 CELA2BP08218 269 aaPredicted RBP6.76□□□□□ -1.33
CALCOCO2-222ENST00000514006 KCNJ6P48051 423 aa6.76□□□□□ -1.33
CALCOCO2-222ENST00000514006 NEK4P51957 841 aa6.76□□□□□ -1.33
CALCOCO2-222ENST00000514006 ZNF445P59923 1031 aa6.76□□□□□ -1.33
CALCOCO2-222ENST00000514006 STRN3Q13033 797 aa6.76□□□□□ -1.33
CALCOCO2-222ENST00000514006 PPP2R5DQ14738 602 aa6.76□□□□□ -1.33
CALCOCO2-222ENST00000514006 GTF2IRD2BQ6EKJ0 949 aa6.76□□□□□ -1.33
CALCOCO2-222ENST00000514006 LYPD4Q6UWN0 246 aa6.76□□□□□ -1.33
CALCOCO2-222ENST00000514006 STRA8Q7Z7C7 330 aa6.76□□□□□ -1.33
CALCOCO2-222ENST00000514006 CDH24Q86UP0 819 aa6.76□□□□□ -1.33
CALCOCO2-222ENST00000514006 GTF2IRD2Q86UP8 949 aa6.76□□□□□ -1.33
CALCOCO2-222ENST00000514006 GSTCDQ8NEC7 633 aa6.76□□□□□ -1.33
CALCOCO2-222ENST00000514006 RNF141Q8WVD5 230 aa6.76□□□□□ -1.33
CALCOCO2-222ENST00000514006 PTPRN2Q92932 1015 aa6.76□□□□□ -1.33
CALCOCO2-222ENST00000514006 BRF1Q92994 677 aa6.76□□□□□ -1.33
CALCOCO2-222ENST00000514006 NOL6Q9H6R4 1146 aaKnown RBP6.76□□□□□ -1.33
CALCOCO2-222ENST00000514006 TNPO3Q9Y5L0 923 aaKnown RBP6.76□□□□□ -1.33
CALCOCO2-222ENST00000514006 FHOD1Q9Y613 1164 aa6.76□□□□□ -1.33
CALCOCO2-222ENST00000514006 COL17A1Q9UMD9 1497 aaPredicted RBP6.75□□□□□ -1.33
CALCOCO2-222ENST00000514006 BLACEA4D250 179 aa6.75□□□□□ -1.33
CALCOCO2-222ENST00000514006 KRBA1A5PL33 1030 aa6.75□□□□□ -1.33
CALCOCO2-222ENST00000514006 NPTXRO95502 500 aa6.75□□□□□ -1.33
CALCOCO2-222ENST00000514006 EYA4O95677 639 aa6.75□□□□□ -1.33
CALCOCO2-222ENST00000514006 SNRPB2P08579 225 aaKnown RBP6.75□□□□□ -1.33
CALCOCO2-222ENST00000514006 POU3F2P20265 443 aaPredicted RBP6.75□□□□□ -1.33
CALCOCO2-222ENST00000514006 RAB6AP20340 208 aa6.75□□□□□ -1.33
CALCOCO2-222ENST00000514006 HOXC12P31275 282 aa6.75□□□□□ -1.33
CALCOCO2-222ENST00000514006 IGFALSP35858 605 aa6.75□□□□□ -1.33
CALCOCO2-222ENST00000514006 FLT3P36888 993 aa6.75□□□□□ -1.33
CALCOCO2-222ENST00000514006 EPHB1P54762 984 aa6.75□□□□□ -1.33
CALCOCO2-222ENST00000514006 GFRA1P56159 465 aa6.75□□□□□ -1.33
CALCOCO2-222ENST00000514006 MAP4K2Q12851 820 aa6.75□□□□□ -1.33
CALCOCO2-222ENST00000514006 TTF1Q15361 905 aaPredicted RBP6.75□□□□□ -1.33
CALCOCO2-222ENST00000514006 NBPF9Q3BBW0 867 aa6.75□□□□□ -1.33
CALCOCO2-222ENST00000514006 PKN3Q6P5Z2 889 aa6.75□□□□□ -1.33
CALCOCO2-222ENST00000514006 FGD2Q7Z6J4 655 aa6.75□□□□□ -1.33
CALCOCO2-222ENST00000514006 SYTL5Q8TDW5 730 aaPredicted RBP6.75□□□□□ -1.33
CALCOCO2-222ENST00000514006 FBXL18Q96ME1 805 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms