RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 NEXNQ0ZGT2 675 aa9.67□□□□□ -0.86
CLDND1-229ENST00000513988 IFIT5Q13325 482 aaKnown RBP9.67□□□□□ -0.86
CLDND1-229ENST00000513988 MTMR2Q13614 643 aa9.67□□□□□ -0.86
CLDND1-229ENST00000513988 PUM1Q14671 1186 aaKnown RBP eCLIP9.67□□□□□ -0.86
CLDND1-229ENST00000513988 TSEN34Q9BSV6 310 aaKnown RBP9.67□□□□□ -0.86
CLDND1-229ENST00000513988 AS3MTQ9HBK9 375 aa9.67□□□□□ -0.86
CLDND1-229ENST00000513988 MAP3K2Q9Y2U5 619 aa9.67□□□□□ -0.86
CLDND1-229ENST00000513988 RABGAP1Q9Y3P9 1069 aa9.67□□□□□ -0.86
CLDND1-229ENST00000513988 DMDP11532 3685 aa9.67□□□□□ -0.86
CLDND1-229ENST00000513988 CEP250Q9BV73 2442 aa9.66□□□□□ -0.86
CLDND1-229ENST00000513988 MAST4O15021 2626 aa9.66□□□□□ -0.86
CLDND1-229ENST00000513988 NBPF20Q3BBV1 942 aa9.66□□□□□ -0.86
CLDND1-229ENST00000513988 LDHAL6AQ6ZMR3 332 aa9.66□□□□□ -0.86
CLDND1-229ENST00000513988 SH3BP5LQ7L8J4 393 aa9.66□□□□□ -0.86
CLDND1-229ENST00000513988 RNF135Q8IUD6 432 aa9.66□□□□□ -0.86
CLDND1-229ENST00000513988 NEK9Q8TD19 979 aa9.66□□□□□ -0.86
CLDND1-229ENST00000513988 GDPD5Q8WTR4 605 aa9.66□□□□□ -0.86
CLDND1-229ENST00000513988 PLEKHF1Q96S99 279 aa9.66□□□□□ -0.86
CLDND1-229ENST00000513988 POP1Q99575 1024 aaKnown RBP9.66□□□□□ -0.86
CLDND1-229ENST00000513988 OSBPL5Q9H0X9 879 aaPredicted RBP9.66□□□□□ -0.86
CLDND1-229ENST00000513988 CNNM1Q9NRU3 951 aa9.66□□□□□ -0.86
CLDND1-229ENST00000513988 CHMP3Q9Y3E7 222 aa9.66□□□□□ -0.86
CLDND1-229ENST00000513988 LAS1LQ9Y4W2 734 aaKnown RBP9.66□□□□□ -0.86
CLDND1-229ENST00000513988 SMCHD1A6NHR9 2005 aa9.66□□□□□ -0.86
CLDND1-229ENST00000513988 DDTLA6NHG4 134 aaPredicted RBP9.65□□□□□ -0.86
CLDND1-229ENST00000513988 ARHGEF15O94989 841 aa9.65□□□□□ -0.86
CLDND1-229ENST00000513988 AVPR2P30518 371 aa9.65□□□□□ -0.86
CLDND1-229ENST00000513988 DIXDC1Q155Q3 683 aa9.65□□□□□ -0.86
CLDND1-229ENST00000513988 CWF19L2Q2TBE0 894 aaKnown RBP9.65□□□□□ -0.86
CLDND1-229ENST00000513988 TAF7LQ5H9L4 462 aa9.65□□□□□ -0.86
CLDND1-229ENST00000513988 DUSP27Q5VZP5 1158 aa9.65□□□□□ -0.86
CLDND1-229ENST00000513988 FBXO33Q7Z6M2 555 aa9.65□□□□□ -0.86
CLDND1-229ENST00000513988 RPUSD2Q8IZ73 545 aaKnown RBP9.65□□□□□ -0.86
CLDND1-229ENST00000513988 ATAD5Q96QE3 1844 aa9.64□□□□□ -0.87
CLDND1-229ENST00000513988 FAM205CA6NFA0 338 aa9.64□□□□□ -0.87
CLDND1-229ENST00000513988 MOXD2PA6NHM9 499 aa9.64□□□□□ -0.87
CLDND1-229ENST00000513988 FAM196BA6NMK8 535 aa9.64□□□□□ -0.87
CLDND1-229ENST00000513988 NEURL1BA8MQ27 555 aa9.64□□□□□ -0.87
CLDND1-229ENST00000513988 KIF28PB7ZC32 967 aa9.64□□□□□ -0.87
CLDND1-229ENST00000513988 CHL1O00533 1208 aa9.64□□□□□ -0.87
CLDND1-229ENST00000513988 CNMDO75829 334 aa9.64□□□□□ -0.87
CLDND1-229ENST00000513988 ADORA2AP29274 412 aa9.64□□□□□ -0.87
CLDND1-229ENST00000513988 ZEB1P37275 1124 aaPredicted RBP9.64□□□□□ -0.87
CLDND1-229ENST00000513988 CDK7P50613 346 aa9.64□□□□□ -0.87
CLDND1-229ENST00000513988 BACE1P56817 501 aa9.64□□□□□ -0.87
CLDND1-229ENST00000513988 RIPK4P57078 832 aa9.64□□□□□ -0.87
CLDND1-229ENST00000513988 GCKRQ14397 625 aa9.64□□□□□ -0.87
CLDND1-229ENST00000513988 CAVIN4Q5BKX8 364 aa9.64□□□□□ -0.87
CLDND1-229ENST00000513988 MCTP2Q6DN12 878 aa9.64□□□□□ -0.87
CLDND1-229ENST00000513988 FRMD5Q7Z6J6 570 aa9.64□□□□□ -0.87
CLDND1-229ENST00000513988 VTI1AQ96AJ9 217 aa9.64□□□□□ -0.87
CLDND1-229ENST00000513988 GLT1D1Q96MS3 346 aa9.64□□□□□ -0.87
CLDND1-229ENST00000513988 IDI2Q9BXS1 227 aa9.64□□□□□ -0.87
CLDND1-229ENST00000513988 HIPK3Q9H422 1215 aa9.64□□□□□ -0.87
CLDND1-229ENST00000513988 ELP1O95163 1332 aa9.63□□□□□ -0.87
CLDND1-229ENST00000513988 TBC1D12O60347 775 aa9.63□□□□□ -0.87
CLDND1-229ENST00000513988 CAP2P40123 477 aa9.63□□□□□ -0.87
CLDND1-229ENST00000513988 CCL23P55773 120 aa9.63□□□□□ -0.87
CLDND1-229ENST00000513988 LMOD3Q0VAK6 560 aa9.63□□□□□ -0.87
CLDND1-229ENST00000513988 EP400NLQ6ZTU2 488 aa9.63□□□□□ -0.87
CLDND1-229ENST00000513988 FAM126BQ8IXS8 530 aa9.63□□□□□ -0.87
CLDND1-229ENST00000513988 WDR18Q9BV38 432 aa9.63□□□□□ -0.87
CLDND1-229ENST00000513988 PNNQ9H307 717 aaKnown RBP9.63□□□□□ -0.87
CLDND1-229ENST00000513988 IGSF5Q9NSI5 407 aa9.63□□□□□ -0.87
CLDND1-229ENST00000513988 SLC5A4Q9NY91 659 aa9.63□□□□□ -0.87
CLDND1-229ENST00000513988 UMODL1Q5DID0 1318 aa9.62□□□□□ -0.87
CLDND1-229ENST00000513988 A0A0U1RQG5 324 aaPredicted RBP9.62□□□□□ -0.87
CLDND1-229ENST00000513988 C19orf81C9J6K1 198 aa9.62□□□□□ -0.87
CLDND1-229ENST00000513988 ARVCFO00192 962 aa9.62□□□□□ -0.87
CLDND1-229ENST00000513988 ADAMTS4O75173 837 aa9.62□□□□□ -0.87
CLDND1-229ENST00000513988 TTLL4Q14679 1199 aa9.62□□□□□ -0.87
CLDND1-229ENST00000513988 KCNA10Q16322 511 aa9.62□□□□□ -0.87
CLDND1-229ENST00000513988 SPRED2Q7Z698 418 aa9.62□□□□□ -0.87
CLDND1-229ENST00000513988 ZNF594Q96JF6 807 aaPredicted RBP9.62□□□□□ -0.87
CLDND1-229ENST00000513988 HS3ST6Q96QI5 342 aa9.62□□□□□ -0.87
CLDND1-229ENST00000513988 SLC9A7Q96T83 725 aa9.62□□□□□ -0.87
CLDND1-229ENST00000513988 SH2B1Q9NRF2 756 aaPredicted RBP9.62□□□□□ -0.87
CLDND1-229ENST00000513988 NRBP1Q9UHY1 535 aa9.62□□□□□ -0.87
CLDND1-229ENST00000513988 TIMELESSQ9UNS1 1208 aa9.62□□□□□ -0.87
CLDND1-229ENST00000513988 ZFYVE26Q68DK2 2539 aa9.61□□□□□ -0.87
CLDND1-229ENST00000513988 ZNF236Q9UL36 1845 aa9.61□□□□□ -0.87
CLDND1-229ENST00000513988 PI4KAP2A4QPH2 592 aa9.61□□□□□ -0.87
CLDND1-229ENST00000513988 STRNO43815 780 aa9.61□□□□□ -0.87
CLDND1-229ENST00000513988 ZXDAP98168 799 aa9.61□□□□□ -0.87
CLDND1-229ENST00000513988 PICALMQ13492 652 aa9.61□□□□□ -0.87
CLDND1-229ENST00000513988 KSR2Q6VAB6 950 aa9.61□□□□□ -0.87
CLDND1-229ENST00000513988 PI4KAP1Q8N8J0 262 aa9.61□□□□□ -0.87
CLDND1-229ENST00000513988 PHOSPHO2Q8TCD6 241 aa9.61□□□□□ -0.87
CLDND1-229ENST00000513988 LENG1Q96BZ8 264 aaPredicted RBP9.61□□□□□ -0.87
CLDND1-229ENST00000513988 CHAMP1Q96JM3 812 aa9.61□□□□□ -0.87
CLDND1-229ENST00000513988 SYNRGQ9UMZ2 1314 aa9.6□□□□□ -0.87
CLDND1-229ENST00000513988 USP17L10C9JJH3 530 aa9.6□□□□□ -0.87
CLDND1-229ENST00000513988 COBLO75128 1261 aa9.6□□□□□ -0.87
CLDND1-229ENST00000513988 ACTN1P12814 892 aa9.6□□□□□ -0.87
CLDND1-229ENST00000513988 AKR1A1P14550 325 aa9.6□□□□□ -0.87
CLDND1-229ENST00000513988 CASP7P55210 303 aa9.6□□□□□ -0.87
CLDND1-229ENST00000513988 CCDC57Q2TAC2 916 aa9.6□□□□□ -0.87
CLDND1-229ENST00000513988 HERC6Q8IVU3 1022 aa9.6□□□□□ -0.87
CLDND1-229ENST00000513988 KIAA2013Q8IYS2 634 aa9.6□□□□□ -0.87
CLDND1-229ENST00000513988 ZNF710Q8N1W2 664 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms