RNA–Protein interactions for RNA: ENST00000513873.1

CLDND1-228, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-228ENST00000513873 ERCC5P28715 1186 aaPredicted RBP6.42□□□□□ -1.38
CLDND1-228ENST00000513873 TNNI2P48788 182 aa6.42□□□□□ -1.38
CLDND1-228ENST00000513873 NKG7Q16617 165 aa6.42□□□□□ -1.38
CLDND1-228ENST00000513873 LRRFIP1Q32MZ4 808 aaKnown RBP6.42□□□□□ -1.38
CLDND1-228ENST00000513873 LETMD1Q6P1Q0 360 aa6.42□□□□□ -1.38
CLDND1-228ENST00000513873 GK5Q6ZS86 529 aa6.42□□□□□ -1.38
CLDND1-228ENST00000513873 UBE3DQ7Z6J8 389 aa6.42□□□□□ -1.38
CLDND1-228ENST00000513873 PHACTR4Q8IZ21 702 aa6.42□□□□□ -1.38
CLDND1-228ENST00000513873 SHISA5Q8N114 240 aa6.42□□□□□ -1.38
CLDND1-228ENST00000513873 REXO1Q8N1G1 1221 aaKnown RBP6.42□□□□□ -1.38
CLDND1-228ENST00000513873 TGIF2Q9GZN2 237 aa6.42□□□□□ -1.38
CLDND1-228ENST00000513873 PRDM5Q9NQX1 630 aaPredicted RBP6.42□□□□□ -1.38
CLDND1-228ENST00000513873 REV1Q9UBZ9 1251 aa6.42□□□□□ -1.38
CLDND1-228ENST00000513873 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.42□□□□□ -1.38
CLDND1-228ENST00000513873 C9orf84Q5VXU9 1444 aa6.42□□□□□ -1.38
CLDND1-228ENST00000513873 TIAM1Q13009 1591 aa6.41□□□□□ -1.38
CLDND1-228ENST00000513873 ETV3P41162 512 aa6.41□□□□□ -1.38
CLDND1-228ENST00000513873 RACK1P63244 317 aaKnown RBP6.41□□□□□ -1.38
CLDND1-228ENST00000513873 GNL2Q13823 731 aaKnown RBP6.41□□□□□ -1.38
CLDND1-228ENST00000513873 TMEM201Q5SNT2 666 aa6.41□□□□□ -1.38
CLDND1-228ENST00000513873 KRTAP5-3Q6L8H2 238 aa6.41□□□□□ -1.38
CLDND1-228ENST00000513873 VSIG10LQ86VR7 867 aa6.41□□□□□ -1.38
CLDND1-228ENST00000513873 METTL16Q86W50 562 aaKnown RBP6.41□□□□□ -1.38
CLDND1-228ENST00000513873 ACSF2Q96CM8 615 aaPredicted RBP6.41□□□□□ -1.38
CLDND1-228ENST00000513873 DPH2Q9BQC3 489 aaPredicted RBP6.41□□□□□ -1.38
CLDND1-228ENST00000513873 INPP5FQ9Y2H2 1132 aa6.41□□□□□ -1.38
CLDND1-228ENST00000513873 PRR36Q9H6K5 1346 aa6.41□□□□□ -1.38
CLDND1-228ENST00000513873 SUPT6HQ7KZ85 1726 aaKnown RBP6.41□□□□□ -1.38
CLDND1-228ENST00000513873 PTPRKQ15262 1439 aa6.41□□□□□ -1.38
CLDND1-228ENST00000513873 RRBP1Q9P2E9 1410 aaKnown RBP6.41□□□□□ -1.38
CLDND1-228ENST00000513873 BIN1O00499 593 aa6.4□□□□□ -1.38
CLDND1-228ENST00000513873 FARP2O94887 1054 aaPredicted RBP6.4□□□□□ -1.38
CLDND1-228ENST00000513873 IMPDH2P12268 514 aa6.4□□□□□ -1.38
CLDND1-228ENST00000513873 PAK2Q13177 524 aa6.4□□□□□ -1.38
CLDND1-228ENST00000513873 COL9A2Q14055 689 aaPredicted RBP6.4□□□□□ -1.38
CLDND1-228ENST00000513873 FAM50AQ14320 339 aaKnown RBP6.4□□□□□ -1.38
CLDND1-228ENST00000513873 FBXW10Q5XX13 1052 aa6.4□□□□□ -1.38
CLDND1-228ENST00000513873 VPS37DQ86XT2 251 aa6.4□□□□□ -1.38
CLDND1-228ENST00000513873 KSR1Q8IVT5 923 aa6.4□□□□□ -1.38
CLDND1-228ENST00000513873 SLITRK4Q8IW52 837 aa6.4□□□□□ -1.38
CLDND1-228ENST00000513873 AGBL5Q8NDL9 886 aa6.4□□□□□ -1.38
CLDND1-228ENST00000513873 EAF1Q96JC9 268 aaPredicted RBP6.4□□□□□ -1.38
CLDND1-228ENST00000513873 COX4I2Q96KJ9 171 aa6.4□□□□□ -1.38
CLDND1-228ENST00000513873 FERD3LQ96RJ6 166 aa6.4□□□□□ -1.38
CLDND1-228ENST00000513873 CRBNQ96SW2 442 aa6.4□□□□□ -1.38
CLDND1-228ENST00000513873 CCDC39Q9UFE4 941 aa6.4□□□□□ -1.38
CLDND1-228ENST00000513873 POLR3KQ9Y2Y1 108 aaPredicted RBP6.4□□□□□ -1.38
CLDND1-228ENST00000513873 CPS1P31327 1500 aa6.4□□□□□ -1.39
CLDND1-228ENST00000513873 UPK3BL1B0FP48 263 aa6.39□□□□□ -1.39
CLDND1-228ENST00000513873 FAM155AB1AL88 458 aaPredicted RBP6.39□□□□□ -1.39
CLDND1-228ENST00000513873 UPK3BL2E5RIL1 263 aa6.39□□□□□ -1.39
CLDND1-228ENST00000513873 IGF2BP3O00425 579 aaKnown RBP eCLIP6.39□□□□□ -1.39
CLDND1-228ENST00000513873 SLITRK5O94991 958 aa6.39□□□□□ -1.39
CLDND1-228ENST00000513873 ATE1O95260 518 aa6.39□□□□□ -1.39
CLDND1-228ENST00000513873 GBP1P32455 592 aa6.39□□□□□ -1.39
CLDND1-228ENST00000513873 CRKP46108 304 aa6.39□□□□□ -1.39
CLDND1-228ENST00000513873 SFRP5Q5T4F7 317 aa6.39□□□□□ -1.39
CLDND1-228ENST00000513873 NETO1Q8TDF5 533 aa6.39□□□□□ -1.39
CLDND1-228ENST00000513873 CYB5D2Q8WUJ1 264 aa6.39□□□□□ -1.39
CLDND1-228ENST00000513873 GPRASP2Q96D09 838 aa6.39□□□□□ -1.39
CLDND1-228ENST00000513873 CCDC74BQ96LY2 380 aa6.39□□□□□ -1.39
CLDND1-228ENST00000513873 SLC38A3Q99624 504 aa6.39□□□□□ -1.39
CLDND1-228ENST00000513873 EHMT1Q9H9B1 1298 aa6.39□□□□□ -1.39
CLDND1-228ENST00000513873 MKNK2Q9HBH9 465 aa6.39□□□□□ -1.39
CLDND1-228ENST00000513873 BSDC1Q9NW68 430 aaPredicted RBP6.39□□□□□ -1.39
CLDND1-228ENST00000513873 GMIPQ9P107 970 aa6.39□□□□□ -1.39
CLDND1-228ENST00000513873 MAPK8IP1Q9UQF2 711 aa6.39□□□□□ -1.39
CLDND1-228ENST00000513873 PLA2R1Q13018 1463 aa6.39□□□□□ -1.39
CLDND1-228ENST00000513873 PRRG2O14669 202 aa6.38□□□□□ -1.39
CLDND1-228ENST00000513873 RAG1P15918 1043 aa6.38□□□□□ -1.39
CLDND1-228ENST00000513873 ITIH2P19823 946 aa6.38□□□□□ -1.39
CLDND1-228ENST00000513873 HOXA10P31260 410 aaPredicted RBP6.38□□□□□ -1.39
CLDND1-228ENST00000513873 CDH24Q86UP0 819 aa6.38□□□□□ -1.39
CLDND1-228ENST00000513873 SLFN12Q8IYM2 578 aa6.38□□□□□ -1.39
CLDND1-228ENST00000513873 STK11IPQ8N1F8 1099 aa6.38□□□□□ -1.39
CLDND1-228ENST00000513873 FAM181AQ8N9Y4 354 aa6.38□□□□□ -1.39
CLDND1-228ENST00000513873 ZC3H7BQ9UGR2 993 aaKnown RBP6.38□□□□□ -1.39
CLDND1-228ENST00000513873 CEP131Q9UPN4 1083 aa6.38□□□□□ -1.39
CLDND1-228ENST00000513873 CLSPNQ9HAW4 1339 aa6.38□□□□□ -1.39
CLDND1-228ENST00000513873 EHBP1L1Q8N3D4 1523 aa6.38□□□□□ -1.39
CLDND1-228ENST00000513873 TCOF1Q13428 1488 aaKnown RBP6.37□□□□□ -1.39
CLDND1-228ENST00000513873 NPATQ14207 1427 aa6.37□□□□□ -1.39
CLDND1-228ENST00000513873 MIA2Q96PC5 1412 aa6.37□□□□□ -1.39
CLDND1-228ENST00000513873 TMEM265A0A087WTH1 108 aa6.37□□□□□ -1.39
CLDND1-228ENST00000513873 CHURC1-FNTBB4DL54 471 aa6.37□□□□□ -1.39
CLDND1-228ENST00000513873 CBX7O95931 251 aa6.37□□□□□ -1.39
CLDND1-228ENST00000513873 EOMESO95936 686 aa6.37□□□□□ -1.39
CLDND1-228ENST00000513873 CLCQ05315 142 aa6.37□□□□□ -1.39
CLDND1-228ENST00000513873 IFI16Q16666 785 aaKnown RBP6.37□□□□□ -1.39
CLDND1-228ENST00000513873 ARSHQ5FYA8 562 aa6.37□□□□□ -1.39
CLDND1-228ENST00000513873 LILRA6Q6PI73 481 aa6.37□□□□□ -1.39
CLDND1-228ENST00000513873 CPLX3Q8WVH0 158 aa6.37□□□□□ -1.39
CLDND1-228ENST00000513873 MISP3Q96FF7 219 aa6.37□□□□□ -1.39
CLDND1-228ENST00000513873 CAPN10Q9HC96 672 aa6.37□□□□□ -1.39
CLDND1-228ENST00000513873 ZNF142P52746 1687 aaPredicted RBP6.36□□□□□ -1.39
CLDND1-228ENST00000513873 ALKQ9UM73 1620 aa6.36□□□□□ -1.39
CLDND1-228ENST00000513873 AGLP35573 1532 aa6.36□□□□□ -1.39
CLDND1-228ENST00000513873 CNTLNQ9NXG0 1405 aa6.36□□□□□ -1.39
CLDND1-228ENST00000513873 NCANO14594 1321 aa6.36□□□□□ -1.39
CLDND1-228ENST00000513873 SLC22A31A6NKX4 558 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms