RNA–Protein interactions for RNA: ENST00000513734.1

HMGN1P17-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 17, humanhuman

BASIC

Gene HMGN1P17, Length 295 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P17-201ENST00000513734 GSTT1P30711 240 aa8.33□□□□□ -1.08
HMGN1P17-201ENST00000513734 FCGRTP55899 365 aa8.33□□□□□ -1.08
HMGN1P17-201ENST00000513734 CCDC184Q52MB2 194 aa8.33□□□□□ -1.08
HMGN1P17-201ENST00000513734 PRPF40BQ6NWY9 871 aaKnown RBP8.33□□□□□ -1.08
HMGN1P17-201ENST00000513734 FCHSD1Q86WN1 690 aa8.33□□□□□ -1.08
HMGN1P17-201ENST00000513734 NBPF5PQ86XG9 351 aaPredicted RBP8.33□□□□□ -1.08
HMGN1P17-201ENST00000513734 CCNJLQ8IV13 435 aa8.33□□□□□ -1.08
HMGN1P17-201ENST00000513734 IRF7Q92985 503 aa8.33□□□□□ -1.08
HMGN1P17-201ENST00000513734 PBX4Q9BYU1 374 aa8.33□□□□□ -1.08
HMGN1P17-201ENST00000513734 ADAMTS8Q9UP79 889 aa8.33□□□□□ -1.08
HMGN1P17-201ENST00000513734 NIP7Q9Y221 180 aaKnown RBP eCLIP8.33□□□□□ -1.08
HMGN1P17-201ENST00000513734 SNED1Q8TER0 1413 aa8.32□□□□□ -1.08
HMGN1P17-201ENST00000513734 SCN4AP35499 1836 aa8.32□□□□□ -1.08
HMGN1P17-201ENST00000513734 TMEM238LA0A1B0GVL6 79 aa8.32□□□□□ -1.08
HMGN1P17-201ENST00000513734 ADARB2-AS1A8MUL3 147 aa8.32□□□□□ -1.08
HMGN1P17-201ENST00000513734 METTL12A8MUP2 240 aa8.32□□□□□ -1.08
HMGN1P17-201ENST00000513734 PDE2AO00408 941 aaPredicted RBP8.32□□□□□ -1.08
HMGN1P17-201ENST00000513734 HSPA6P17066 643 aa8.32□□□□□ -1.08
HMGN1P17-201ENST00000513734 GPTP24298 496 aa8.32□□□□□ -1.08
HMGN1P17-201ENST00000513734 ST5P78524 1137 aa8.32□□□□□ -1.08
HMGN1P17-201ENST00000513734 HTRA3P83110 453 aa8.32□□□□□ -1.08
HMGN1P17-201ENST00000513734 HDLBPQ00341 1268 aaKnown RBP8.32□□□□□ -1.08
HMGN1P17-201ENST00000513734 MEI1Q5TIA1 1274 aa8.32□□□□□ -1.08
HMGN1P17-201ENST00000513734 DTHD1Q6ZMT9 781 aa8.32□□□□□ -1.08
HMGN1P17-201ENST00000513734 MICALL1Q8N3F8 863 aa8.32□□□□□ -1.08
HMGN1P17-201ENST00000513734 NXPE3Q969Y0 559 aa8.32□□□□□ -1.08
HMGN1P17-201ENST00000513734 OXCT2Q9BYC2 517 aaPredicted RBP8.32□□□□□ -1.08
HMGN1P17-201ENST00000513734 PRKRIP1Q9H875 184 aaPredicted RBP8.32□□□□□ -1.08
HMGN1P17-201ENST00000513734 RRAGCQ9HB90 399 aa8.32□□□□□ -1.08
HMGN1P17-201ENST00000513734 ABCB6Q9NP58 842 aa8.32□□□□□ -1.08
HMGN1P17-201ENST00000513734 TSPYL4Q9UJ04 414 aa8.32□□□□□ -1.08
HMGN1P17-201ENST00000513734 LTBP1Q14766 1721 aa8.32□□□□□ -1.08
HMGN1P17-201ENST00000513734 MAP3K15Q6ZN16 1313 aa8.31□□□□□ -1.08
HMGN1P17-201ENST00000513734 MYH3P11055 1940 aa8.31□□□□□ -1.08
HMGN1P17-201ENST00000513734 NPHP1O15259 732 aa8.31□□□□□ -1.08
HMGN1P17-201ENST00000513734 SMNDC1O75940 238 aaKnown RBP eCLIP8.31□□□□□ -1.08
HMGN1P17-201ENST00000513734 NEFMP07197 916 aa8.31□□□□□ -1.08
HMGN1P17-201ENST00000513734 EIF2S2P20042 333 aaKnown RBP8.31□□□□□ -1.08
HMGN1P17-201ENST00000513734 LMNB1P20700 586 aa8.31□□□□□ -1.08
HMGN1P17-201ENST00000513734 PDE6BP35913 854 aa8.31□□□□□ -1.08
HMGN1P17-201ENST00000513734 ZNF76P36508 570 aa8.31□□□□□ -1.08
HMGN1P17-201ENST00000513734 FANCCQ00597 558 aa8.31□□□□□ -1.08
HMGN1P17-201ENST00000513734 SRSF11Q05519 484 aaKnown RBP8.31□□□□□ -1.08
HMGN1P17-201ENST00000513734 TAF1CQ15572 869 aaPredicted RBP8.31□□□□□ -1.08
HMGN1P17-201ENST00000513734 PERM1Q5SV97 790 aa8.31□□□□□ -1.08
HMGN1P17-201ENST00000513734 CEP135Q66GS9 1140 aa8.31□□□□□ -1.08
HMGN1P17-201ENST00000513734 ELMSAN1Q6PJG2 1045 aa8.31□□□□□ -1.08
HMGN1P17-201ENST00000513734 CLEC4GQ6UXB4 293 aa8.31□□□□□ -1.08
HMGN1P17-201ENST00000513734 GOLGA6L1Q8N7Z2 621 aa8.31□□□□□ -1.08
HMGN1P17-201ENST00000513734 TMEM102Q8N9M5 508 aaPredicted RBP8.31□□□□□ -1.08
HMGN1P17-201ENST00000513734 ASAP3Q8TDY4 903 aa8.31□□□□□ -1.08
HMGN1P17-201ENST00000513734 PNISRQ8TF01 805 aaKnown RBP8.31□□□□□ -1.08
HMGN1P17-201ENST00000513734 RNF34Q969K3 372 aa8.31□□□□□ -1.08
HMGN1P17-201ENST00000513734 PLD4Q96BZ4 506 aa8.31□□□□□ -1.08
HMGN1P17-201ENST00000513734 NAGPAQ9UK23 515 aa8.31□□□□□ -1.08
HMGN1P17-201ENST00000513734 AKAP2Q9Y2D5 859 aa8.31□□□□□ -1.08
HMGN1P17-201ENST00000513734 LRRC37AA6NMS7 1700 aa8.3□□□□□ -1.08
HMGN1P17-201ENST00000513734 ELOA3CA0A087WX78 387 aaPredicted RBP8.3□□□□□ -1.08
HMGN1P17-201ENST00000513734 ELOA3DA6NLF2 546 aaPredicted RBP8.3□□□□□ -1.08
HMGN1P17-201ENST00000513734 ALAS2P22557 587 aa8.3□□□□□ -1.08
HMGN1P17-201ENST00000513734 GRIA4P48058 902 aa8.3□□□□□ -1.08
HMGN1P17-201ENST00000513734 KRT76Q01546 638 aa8.3□□□□□ -1.08
HMGN1P17-201ENST00000513734 SPRED3Q2MJR0 410 aa8.3□□□□□ -1.08
HMGN1P17-201ENST00000513734 ELOA3BQ3SY89 546 aa8.3□□□□□ -1.08
HMGN1P17-201ENST00000513734 SUSD4Q5VX71 490 aa8.3□□□□□ -1.08
HMGN1P17-201ENST00000513734 STYK1Q6J9G0 422 aa8.3□□□□□ -1.08
HMGN1P17-201ENST00000513734 C3orf58Q8NDZ4 430 aa8.3□□□□□ -1.08
HMGN1P17-201ENST00000513734 ELOA3Q8NG57 546 aa8.3□□□□□ -1.08
HMGN1P17-201ENST00000513734 MASTLQ96GX5 879 aa8.3□□□□□ -1.08
HMGN1P17-201ENST00000513734 POP1Q99575 1024 aaKnown RBP8.3□□□□□ -1.08
HMGN1P17-201ENST00000513734 BHLHE41Q9C0J9 482 aaPredicted RBP8.3□□□□□ -1.08
HMGN1P17-201ENST00000513734 SMG9Q9H0W8 520 aaKnown RBP8.3□□□□□ -1.08
HMGN1P17-201ENST00000513734 METTL5Q9NRN9 209 aaKnown RBP8.3□□□□□ -1.08
HMGN1P17-201ENST00000513734 GDF2Q9UK05 429 aaPredicted RBP8.3□□□□□ -1.08
HMGN1P17-201ENST00000513734 TTF2Q9UNY4 1162 aaKnown RBP8.3□□□□□ -1.08
HMGN1P17-201ENST00000513734 ZNF652Q9Y2D9 606 aa8.3□□□□□ -1.08
HMGN1P17-201ENST00000513734 LAS1LQ9Y4W2 734 aaKnown RBP8.3□□□□□ -1.08
HMGN1P17-201ENST00000513734 ADAMTSL1Q8N6G6 1762 aa8.3□□□□□ -1.08
HMGN1P17-201ENST00000513734 POLR2AP24928 1970 aaKnown RBP8.3□□□□□ -1.08
HMGN1P17-201ENST00000513734 KLRG2A4D1S0 409 aaPredicted RBP8.29□□□□□ -1.08
HMGN1P17-201ENST00000513734 TOMM70O94826 608 aa8.29□□□□□ -1.08
HMGN1P17-201ENST00000513734 NTSR2O95665 410 aa8.29□□□□□ -1.08
HMGN1P17-201ENST00000513734 XRCC5P13010 732 aaKnown RBP8.29□□□□□ -1.08
HMGN1P17-201ENST00000513734 WDR43Q15061 677 aaKnown RBP eCLIP8.29□□□□□ -1.08
HMGN1P17-201ENST00000513734 SYNE4Q8N205 404 aa8.29□□□□□ -1.08
HMGN1P17-201ENST00000513734 RUNDC1Q96C34 613 aa8.29□□□□□ -1.08
HMGN1P17-201ENST00000513734 MDFIQ99750 246 aa8.29□□□□□ -1.08
HMGN1P17-201ENST00000513734 CACNA1FO60840 1977 aa8.29□□□□□ -1.08
HMGN1P17-201ENST00000513734 KDM2BQ8NHM5 1336 aa8.29□□□□□ -1.08
HMGN1P17-201ENST00000513734 ZNF541Q9H0D2 1346 aa8.29□□□□□ -1.08
HMGN1P17-201ENST00000513734 A0A096LPE4 126 aa8.28□□□□□ -1.08
HMGN1P17-201ENST00000513734 A0A1W2PPZ6 126 aa8.28□□□□□ -1.08
HMGN1P17-201ENST00000513734 GLTPD2A6NH11 291 aa8.28□□□□□ -1.08
HMGN1P17-201ENST00000513734 ERVV-1B6SEH8 477 aa8.28□□□□□ -1.08
HMGN1P17-201ENST00000513734 CHL1O00533 1208 aa8.28□□□□□ -1.08
HMGN1P17-201ENST00000513734 ERCC5P28715 1186 aaPredicted RBP8.28□□□□□ -1.08
HMGN1P17-201ENST00000513734 ST13P50502 369 aaKnown RBP8.28□□□□□ -1.08
HMGN1P17-201ENST00000513734 AIMP1Q12904 312 aaKnown RBP8.28□□□□□ -1.08
HMGN1P17-201ENST00000513734 PSAPL1Q6NUJ1 521 aa8.28□□□□□ -1.08
HMGN1P17-201ENST00000513734 KIF6Q6ZMV9 814 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms