RNA–Protein interactions for RNA: ENST00000513048.5

DHFR-206, Transcript of dihydrofolate reductase, humanhuman

TSL 1 (best)

Gene DHFR, Length 994 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-206ENST00000513048 KLRF2D3W0D1 207 aa10.85□□□□□ -0.67
DHFR-206ENST00000513048 DEXIO95424 95 aa10.85□□□□□ -0.67
DHFR-206ENST00000513048 ASNSP08243 561 aa10.85□□□□□ -0.67
DHFR-206ENST00000513048 PARP1P09874 1014 aaKnown RBP10.85□□□□□ -0.67
DHFR-206ENST00000513048 ECE1P42892 770 aa10.85□□□□□ -0.67
DHFR-206ENST00000513048 ASPRV1Q53RT3 343 aa10.85□□□□□ -0.67
DHFR-206ENST00000513048 KIAA1755Q5JYT7 1200 aa10.85□□□□□ -0.67
DHFR-206ENST00000513048 OTUD7BQ6GQQ9 843 aa10.85□□□□□ -0.67
DHFR-206ENST00000513048 CCDC82Q8N4S0 544 aa10.85□□□□□ -0.67
DHFR-206ENST00000513048 KLRG1Q96E93 195 aa10.85□□□□□ -0.67
DHFR-206ENST00000513048 CHAMP1Q96JM3 812 aa10.85□□□□□ -0.67
DHFR-206ENST00000513048 C8orf76Q96K31 380 aa10.85□□□□□ -0.67
DHFR-206ENST00000513048 LZTS2Q9BRK4 669 aa10.85□□□□□ -0.67
DHFR-206ENST00000513048 SPZ1Q9BXG8 430 aa10.85□□□□□ -0.67
DHFR-206ENST00000513048 GLIS2Q9BZE0 524 aaPredicted RBP10.85□□□□□ -0.67
DHFR-206ENST00000513048 RIOX1Q9H6W3 641 aa10.85□□□□□ -0.67
DHFR-206ENST00000513048 TMX2Q9Y320 296 aa10.85□□□□□ -0.67
DHFR-206ENST00000513048 KIF3AQ9Y496 699 aa10.85□□□□□ -0.67
DHFR-206ENST00000513048 V9GY48 417 aaPredicted RBP10.85□□□□□ -0.67
DHFR-206ENST00000513048 MYH15Q9Y2K3 1946 aa10.84□□□□□ -0.67
DHFR-206ENST00000513048 hCG_1642624A0A1W2PR95 340 aa10.84□□□□□ -0.67
DHFR-206ENST00000513048 F5H6K3 240 aa10.84□□□□□ -0.67
DHFR-206ENST00000513048 USP2O75604 605 aaPredicted RBP10.84□□□□□ -0.67
DHFR-206ENST00000513048 BAG4O95429 457 aaKnown RBP10.84□□□□□ -0.67
DHFR-206ENST00000513048 NDUFB10O96000 172 aa10.84□□□□□ -0.67
DHFR-206ENST00000513048 VEGFAP15692 232 aaPredicted RBP10.84□□□□□ -0.67
DHFR-206ENST00000513048 FOSBP53539 338 aa10.84□□□□□ -0.67
DHFR-206ENST00000513048 ATP2B2Q01814 1243 aa10.84□□□□□ -0.67
DHFR-206ENST00000513048 KLRC3Q07444 240 aa10.84□□□□□ -0.67
DHFR-206ENST00000513048 NFKBIBQ15653 356 aa10.84□□□□□ -0.67
DHFR-206ENST00000513048 PFKFB3Q16875 520 aaPredicted RBP10.84□□□□□ -0.67
DHFR-206ENST00000513048 SUPT20HL1Q3ZLR7 823 aa10.84□□□□□ -0.67
DHFR-206ENST00000513048 NOL9Q5SY16 702 aaKnown RBP10.84□□□□□ -0.67
DHFR-206ENST00000513048 SLFN13Q68D06 897 aa10.84□□□□□ -0.67
DHFR-206ENST00000513048 KRT40Q6A162 431 aa10.84□□□□□ -0.67
DHFR-206ENST00000513048 TTBK2Q6IQ55 1244 aa10.84□□□□□ -0.67
DHFR-206ENST00000513048 KRT26Q7Z3Y9 468 aa10.84□□□□□ -0.67
DHFR-206ENST00000513048 CCDC84Q86UT8 332 aaPredicted RBP10.84□□□□□ -0.67
DHFR-206ENST00000513048 SULF1Q8IWU6 871 aa10.84□□□□□ -0.67
DHFR-206ENST00000513048 TRIM22Q8IYM9 498 aa10.84□□□□□ -0.67
DHFR-206ENST00000513048 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.84□□□□□ -0.671e-9■■□□□ 13.5
DHFR-206ENST00000513048 DCAF4Q8WV16 495 aa10.84□□□□□ -0.67
DHFR-206ENST00000513048 WASF1Q92558 559 aa10.84□□□□□ -0.67
DHFR-206ENST00000513048 GMCL1Q96IK5 515 aa10.84□□□□□ -0.67
DHFR-206ENST00000513048 CPVLQ9H3G5 476 aa10.84□□□□□ -0.67
DHFR-206ENST00000513048 FZD1Q9UP38 647 aa10.84□□□□□ -0.67
DHFR-206ENST00000513048 MTMR7Q9Y216 660 aa10.84□□□□□ -0.67
DHFR-206ENST00000513048 FRMPD2Q68DX3 1309 aaPredicted RBP10.84□□□□□ -0.67
DHFR-206ENST00000513048 POTEIP0CG38 1075 aa10.83□□□□□ -0.68
DHFR-206ENST00000513048 POTEJP0CG39 1038 aa10.83□□□□□ -0.68
DHFR-206ENST00000513048 MCM4P33991 863 aa10.83□□□□□ -0.68
DHFR-206ENST00000513048 GUCY1B3Q02153 619 aa10.83□□□□□ -0.68
DHFR-206ENST00000513048 NPY5RQ15761 445 aa10.83□□□□□ -0.68
DHFR-206ENST00000513048 GPATCH4Q5T3I0 446 aaKnown RBP10.83□□□□□ -0.68
DHFR-206ENST00000513048 USP48Q86UV5 1035 aa10.83□□□□□ -0.68
DHFR-206ENST00000513048 FERMT3Q86UX7 667 aa10.83□□□□□ -0.68
DHFR-206ENST00000513048 PNMA8AQ86V59 439 aaPredicted RBP10.83□□□□□ -0.68
DHFR-206ENST00000513048 SCYL3Q8IZE3 742 aa10.83□□□□□ -0.68
DHFR-206ENST00000513048 MTMR8Q96EF0 704 aa10.83□□□□□ -0.68
DHFR-206ENST00000513048 CDCA5Q96FF9 252 aa10.83□□□□□ -0.68
DHFR-206ENST00000513048 UBA5Q9GZZ9 404 aa10.83□□□□□ -0.68
DHFR-206ENST00000513048 ARHGEF10LQ9HCE6 1279 aa10.83□□□□□ -0.68
DHFR-206ENST00000513048 GPCPD1Q9NPB8 672 aa10.83□□□□□ -0.68
DHFR-206ENST00000513048 TCHHQ07283 1943 aa10.83□□□□□ -0.68
DHFR-206ENST00000513048 KIF28PB7ZC32 967 aa10.82□□□□□ -0.68
DHFR-206ENST00000513048 H3BQV1 296 aa10.82□□□□□ -0.68
DHFR-206ENST00000513048 SCG2P13521 617 aa10.82□□□□□ -0.68
DHFR-206ENST00000513048 MNX1P50219 401 aaPredicted RBP10.82□□□□□ -0.68
DHFR-206ENST00000513048 KIF23Q02241 960 aaPredicted RBP10.82□□□□□ -0.68
DHFR-206ENST00000513048 EAPPQ56P03 285 aaPredicted RBP10.82□□□□□ -0.68
DHFR-206ENST00000513048 IFFO2Q5TF58 517 aa10.82□□□□□ -0.68
DHFR-206ENST00000513048 BTNL9Q6UXG8 535 aa10.82□□□□□ -0.68
DHFR-206ENST00000513048 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.82□□□□□ -0.68
DHFR-206ENST00000513048 KCTD1Q719H9 257 aa10.82□□□□□ -0.68
DHFR-206ENST00000513048 ZKSCAN4Q969J2 545 aaPredicted RBP10.82□□□□□ -0.68
DHFR-206ENST00000513048 WRNIP1Q96S55 665 aa10.82□□□□□ -0.68
DHFR-206ENST00000513048 NUP88Q99567 741 aaPredicted RBP10.82□□□□□ -0.68
DHFR-206ENST00000513048 WDR18Q9BV38 432 aa10.82□□□□□ -0.68
DHFR-206ENST00000513048 PHF20Q9BVI0 1012 aa10.82□□□□□ -0.68
DHFR-206ENST00000513048 VCPKMTQ9H867 229 aa10.82□□□□□ -0.68
DHFR-206ENST00000513048 RBM27Q9P2N5 1060 aaKnown RBP10.82□□□□□ -0.68
DHFR-206ENST00000513048 SRCAPQ6ZRS2 3230 aa10.82□□□□□ -0.68
DHFR-206ENST00000513048 MMP1P03956 469 aa10.81□□□□□ -0.68
DHFR-206ENST00000513048 PTPRAP18433 802 aa10.81□□□□□ -0.68
DHFR-206ENST00000513048 SLC1A4P43007 532 aa10.81□□□□□ -0.68
DHFR-206ENST00000513048 AKAP17AQ02040 695 aaKnown RBP10.81□□□□□ -0.68
DHFR-206ENST00000513048 MAP3K11Q16584 847 aa10.81□□□□□ -0.68
DHFR-206ENST00000513048 CCDC96Q2M329 555 aa10.81□□□□□ -0.68
DHFR-206ENST00000513048 TYW1BQ6NUM6 668 aa10.81□□□□□ -0.68
DHFR-206ENST00000513048 FAM173BQ6P4H8 233 aa10.81□□□□□ -0.68
DHFR-206ENST00000513048 ADGRF4Q8IZF3 695 aa10.81□□□□□ -0.68
DHFR-206ENST00000513048 GBP4Q96PP9 640 aa10.81□□□□□ -0.68
DHFR-206ENST00000513048 PIGSQ96S52 555 aa10.81□□□□□ -0.68
DHFR-206ENST00000513048 KIAA1683Q9H0B3 1180 aa10.81□□□□□ -0.68
DHFR-206ENST00000513048 ZSCAN16Q9H4T2 348 aaPredicted RBP10.81□□□□□ -0.68
DHFR-206ENST00000513048 JMJD4Q9H9V9 463 aa10.81□□□□□ -0.68
DHFR-206ENST00000513048 RRAGCQ9HB90 399 aa10.81□□□□□ -0.68
DHFR-206ENST00000513048 VPS54Q9P1Q0 977 aa10.81□□□□□ -0.68
DHFR-206ENST00000513048 KCNJ14Q9UNX9 436 aa10.81□□□□□ -0.68
DHFR-206ENST00000513048 SNCAIPQ9Y6H5 919 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms