RNA–Protein interactions for RNA: ENST00000512923.5

SSBP2-216, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5

Gene SSBP2, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-216ENST00000512923 CALM1P0DP23 149 aa11.77□□□□□ -0.53
SSBP2-216ENST00000512923 CALM2P0DP24 149 aa11.77□□□□□ -0.53
SSBP2-216ENST00000512923 CALM3P0DP25 149 aa11.77□□□□□ -0.53
SSBP2-216ENST00000512923 EVCP57679 992 aa11.77□□□□□ -0.53
SSBP2-216ENST00000512923 APOBRQ0VD83 1088 aa11.77□□□□□ -0.53
SSBP2-216ENST00000512923 LDLRAD1Q5T700 205 aa11.77□□□□□ -0.53
SSBP2-216ENST00000512923 CST9Q5W186 159 aa11.77□□□□□ -0.53
SSBP2-216ENST00000512923 APOA5Q6Q788 366 aa11.77□□□□□ -0.53
SSBP2-216ENST00000512923 MOB2Q70IA6 237 aa11.77□□□□□ -0.53
SSBP2-216ENST00000512923 NOL8Q76FK4 1167 aaKnown RBP11.77□□□□□ -0.53
SSBP2-216ENST00000512923 ZNF654Q8IZM8 581 aa11.77□□□□□ -0.53
SSBP2-216ENST00000512923 PNMA1Q8ND90 353 aa11.77□□□□□ -0.53
SSBP2-216ENST00000512923 FEZ1Q99689 392 aa11.77□□□□□ -0.53
SSBP2-216ENST00000512923 TMEM47Q9BQJ4 181 aa11.77□□□□□ -0.53
SSBP2-216ENST00000512923 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.77□□□□□ -0.53
SSBP2-216ENST00000512923 NAP1L2Q9ULW6 460 aaPredicted RBP11.77□□□□□ -0.53
SSBP2-216ENST00000512923 RBM19Q9Y4C8 960 aaKnown RBP11.77□□□□□ -0.53
SSBP2-216ENST00000512923 GOLGA8BA8MQT2 603 aa11.76□□□□□ -0.53
SSBP2-216ENST00000512923 ZBTB43O43298 467 aa11.76□□□□□ -0.53
SSBP2-216ENST00000512923 CD2BP2O95400 341 aaKnown RBP11.76□□□□□ -0.53
SSBP2-216ENST00000512923 RCAN1P53805 252 aa11.76□□□□□ -0.53
SSBP2-216ENST00000512923 BECN1Q14457 450 aa11.76□□□□□ -0.53
SSBP2-216ENST00000512923 ERO1BQ86YB8 467 aa11.76□□□□□ -0.53
SSBP2-216ENST00000512923 LRRC47Q8N1G4 583 aaKnown RBP11.76□□□□□ -0.53
SSBP2-216ENST00000512923 MKL1Q969V6 931 aa11.76□□□□□ -0.53
SSBP2-216ENST00000512923 ZNF274Q96GC6 653 aaPredicted RBP11.76□□□□□ -0.53
SSBP2-216ENST00000512923 ZSCAN31Q96LW9 406 aaPredicted RBP11.76□□□□□ -0.53
SSBP2-216ENST00000512923 WDR18Q9BV38 432 aa11.76□□□□□ -0.53
SSBP2-216ENST00000512923 ELP3Q9H9T3 547 aa11.76□□□□□ -0.53
SSBP2-216ENST00000512923 SENP2Q9HC62 589 aa11.76□□□□□ -0.53
SSBP2-216ENST00000512923 GOPCQ9HD26 462 aa11.76□□□□□ -0.53
SSBP2-216ENST00000512923 RTN4Q9NQC3 1192 aaKnown RBP11.76□□□□□ -0.53
SSBP2-216ENST00000512923 SH2B1Q9NRF2 756 aaPredicted RBP11.76□□□□□ -0.53
SSBP2-216ENST00000512923 TPCN1Q9ULQ1 816 aa11.76□□□□□ -0.53
SSBP2-216ENST00000512923 TMX2Q9Y320 296 aa11.76□□□□□ -0.53
SSBP2-216ENST00000512923 PTPRFP10586 1907 aa11.75□□□□□ -0.53
SSBP2-216ENST00000512923 NID2Q14112 1375 aa11.75□□□□□ -0.53
SSBP2-216ENST00000512923 SPDYE5A6NIY4 337 aa11.75□□□□□ -0.53
SSBP2-216ENST00000512923 K7ELQ4 463 aaPredicted RBP11.75□□□□□ -0.53
SSBP2-216ENST00000512923 PPATQ06203 517 aa11.75□□□□□ -0.53
SSBP2-216ENST00000512923 CCDC84Q86UT8 332 aaPredicted RBP11.75□□□□□ -0.53
SSBP2-216ENST00000512923 MICU3Q86XE3 530 aa11.75□□□□□ -0.53
SSBP2-216ENST00000512923 SIAH1Q8IUQ4 282 aa11.75□□□□□ -0.53
SSBP2-216ENST00000512923 PLPP6Q8IY26 295 aa11.75□□□□□ -0.53
SSBP2-216ENST00000512923 ZNF280CQ8ND82 737 aa11.75□□□□□ -0.53
SSBP2-216ENST00000512923 GMCL1P1Q8NEA9 526 aa11.75□□□□□ -0.53
SSBP2-216ENST00000512923 CLMNQ96JQ2 1002 aa11.75□□□□□ -0.53
SSBP2-216ENST00000512923 MAP3K14Q99558 947 aa11.75□□□□□ -0.53
SSBP2-216ENST00000512923 LARP6Q9BRS8 491 aaKnown RBP11.75□□□□□ -0.53
SSBP2-216ENST00000512923 KIAA1683Q9H0B3 1180 aa11.75□□□□□ -0.53
SSBP2-216ENST00000512923 BRPF3Q9ULD4 1205 aa11.75□□□□□ -0.53
SSBP2-216ENST00000512923 LHX6Q9UPM6 363 aa11.75□□□□□ -0.53
SSBP2-216ENST00000512923 ZHX2Q9Y6X8 837 aa11.75□□□□□ -0.53
SSBP2-216ENST00000512923 LOC285556D6RIA3 1793 aa11.74□□□□□ -0.53
SSBP2-216ENST00000512923 A0A1W2PRG0 241 aa11.74□□□□□ -0.53
SSBP2-216ENST00000512923 TMEM88BA6NKF7 163 aa11.74□□□□□ -0.53
SSBP2-216ENST00000512923 GOLGA8AA7E2F4 631 aa11.74□□□□□ -0.53
SSBP2-216ENST00000512923 USP17L10C9JJH3 530 aa11.74□□□□□ -0.53
SSBP2-216ENST00000512923 PDIA3P30101 505 aaKnown RBP11.74□□□□□ -0.53
SSBP2-216ENST00000512923 ECE1P42892 770 aa11.74□□□□□ -0.53
SSBP2-216ENST00000512923 METAP2P50579 478 aaKnown RBP eCLIP11.74□□□□□ -0.53
SSBP2-216ENST00000512923 USP14P54578 494 aa11.74□□□□□ -0.53
SSBP2-216ENST00000512923 HUNKP57058 714 aa11.74□□□□□ -0.53
SSBP2-216ENST00000512923 DSG2Q14126 1118 aa11.74□□□□□ -0.53
SSBP2-216ENST00000512923 PPP2R5BQ15173 497 aa11.74□□□□□ -0.53
SSBP2-216ENST00000512923 CTCFLQ8NI51 663 aaPredicted RBP11.74□□□□□ -0.53
SSBP2-216ENST00000512923 ACER1Q8TDN7 264 aa11.74□□□□□ -0.53
SSBP2-216ENST00000512923 NUP133Q8WUM0 1156 aa11.74□□□□□ -0.53
SSBP2-216ENST00000512923 CHMP4CQ96CF2 233 aa11.74□□□□□ -0.53
SSBP2-216ENST00000512923 OPTNQ96CV9 577 aa11.74□□□□□ -0.53
SSBP2-216ENST00000512923 SLC10A4Q96EP9 437 aa11.74□□□□□ -0.53
SSBP2-216ENST00000512923 MYL10Q9BUA6 226 aa11.74□□□□□ -0.53
SSBP2-216ENST00000512923 SLKQ9H2G2 1235 aaPredicted RBP11.74□□□□□ -0.53
SSBP2-216ENST00000512923 VCPKMTQ9H867 229 aa11.74□□□□□ -0.53
SSBP2-216ENST00000512923 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.74□□□□□ -0.53
SSBP2-216ENST00000512923 CCDC196A0A1B0GTZ2 297 aa11.73□□□□□ -0.53
SSBP2-216ENST00000512923 TRIM75PA6NK02 468 aa11.73□□□□□ -0.53
SSBP2-216ENST00000512923 C19orf81C9J6K1 198 aa11.73□□□□□ -0.53
SSBP2-216ENST00000512923 F5H6K3 240 aa11.73□□□□□ -0.53
SSBP2-216ENST00000512923 RAD21O60216 631 aa11.73□□□□□ -0.53
SSBP2-216ENST00000512923 PFKFB2O60825 505 aa11.73□□□□□ -0.53
SSBP2-216ENST00000512923 LARGE1O95461 756 aa11.73□□□□□ -0.53
SSBP2-216ENST00000512923 KIF5BP33176 963 aa11.73□□□□□ -0.53
SSBP2-216ENST00000512923 FOXK1P85037 733 aa11.73□□□□□ -0.53
SSBP2-216ENST00000512923 KLRC3Q07444 240 aa11.73□□□□□ -0.53
SSBP2-216ENST00000512923 TROAPQ12815 778 aa11.73□□□□□ -0.53
SSBP2-216ENST00000512923 SPP2Q13103 211 aa11.73□□□□□ -0.53
SSBP2-216ENST00000512923 STK3Q13188 491 aa11.73□□□□□ -0.53
SSBP2-216ENST00000512923 PPIL2Q13356 520 aa11.73□□□□□ -0.53
SSBP2-216ENST00000512923 MTMR2Q13614 643 aa11.73□□□□□ -0.53
SSBP2-216ENST00000512923 ZYXQ15942 572 aaKnown RBP11.73□□□□□ -0.53
SSBP2-216ENST00000512923 ME3Q16798 604 aa11.73□□□□□ -0.53
SSBP2-216ENST00000512923 RTN1Q16799 776 aa11.73□□□□□ -0.53
SSBP2-216ENST00000512923 ASPRV1Q53RT3 343 aa11.73□□□□□ -0.53
SSBP2-216ENST00000512923 SAPCD2Q86UD0 394 aa11.73□□□□□ -0.53
SSBP2-216ENST00000512923 DCAF4Q8WV16 495 aa11.73□□□□□ -0.53
SSBP2-216ENST00000512923 LPAR1Q92633 364 aa11.73□□□□□ -0.53
SSBP2-216ENST00000512923 GMCL1Q96IK5 515 aa11.73□□□□□ -0.53
SSBP2-216ENST00000512923 TMX3Q96JJ7 454 aa11.73□□□□□ -0.53
SSBP2-216ENST00000512923 RBM28Q9NW13 759 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms