RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 ST13P5Q8NFI4 369 aaPredicted RBP6.11□□□□□ -1.43
HTT-210ENST00000512909 FGD4Q96M96 766 aa6.11□□□□□ -1.43
HTT-210ENST00000512909 FBXL18Q96ME1 805 aa6.11□□□□□ -1.43
HTT-210ENST00000512909 HAUS7Q99871 368 aa6.11□□□□□ -1.43
HTT-210ENST00000512909 WHRNQ9P202 907 aa6.11□□□□□ -1.43
HTT-210ENST00000512909 PFDN2Q9UHV9 154 aa6.11□□□□□ -1.43
HTT-210ENST00000512909 SF3B6Q9Y3B4 125 aaKnown RBP6.11□□□□□ -1.43
HTT-210ENST00000512909 KDM2BQ8NHM5 1336 aa6.1□□□□□ -1.43
HTT-210ENST00000512909 IGF2BP3O00425 579 aaKnown RBP eCLIP6.1□□□□□ -1.43
HTT-210ENST00000512909 EOMESO95936 686 aa6.1□□□□□ -1.43
HTT-210ENST00000512909 F13BP05160 661 aa6.1□□□□□ -1.43
HTT-210ENST00000512909 ADMP35318 185 aa6.1□□□□□ -1.43
HTT-210ENST00000512909 SERINC3Q13530 473 aa6.1□□□□□ -1.43
HTT-210ENST00000512909 CDKAL1Q5VV42 579 aa6.1□□□□□ -1.43
HTT-210ENST00000512909 DCAF15Q66K64 600 aa6.1□□□□□ -1.43
HTT-210ENST00000512909 LRRN4CLQ8ND94 238 aa6.1□□□□□ -1.43
HTT-210ENST00000512909 PPP1R13LQ8WUF5 828 aa6.1□□□□□ -1.43
HTT-210ENST00000512909 PSMG3-AS1Q96PY0 264 aa6.1□□□□□ -1.43
HTT-210ENST00000512909 CDC6Q99741 560 aa6.1□□□□□ -1.43
HTT-210ENST00000512909 SMARCA5O60264 1052 aaPredicted RBP6.09□□□□□ -1.43
HTT-210ENST00000512909 EPHX1P07099 455 aa6.09□□□□□ -1.43
HTT-210ENST00000512909 CANXP27824 592 aaKnown RBP6.09□□□□□ -1.43
HTT-210ENST00000512909 PPP2R5DQ14738 602 aa6.09□□□□□ -1.43
HTT-210ENST00000512909 AXDND1Q5T1B0 1012 aaPredicted RBP6.09□□□□□ -1.43
HTT-210ENST00000512909 ADCY4Q8NFM4 1077 aa6.09□□□□□ -1.43
HTT-210ENST00000512909 PIWIL2Q8TC59 973 aaKnown RBP6.09□□□□□ -1.43
HTT-210ENST00000512909 DNAJC7Q99615 494 aa6.09□□□□□ -1.43
HTT-210ENST00000512909 SPOCK3Q9BQ16 436 aa6.09□□□□□ -1.43
HTT-210ENST00000512909 SLKQ9H2G2 1235 aaPredicted RBP6.09□□□□□ -1.43
HTT-210ENST00000512909 PIM2Q9P1W9 311 aa6.09□□□□□ -1.43
HTT-210ENST00000512909 AKT3Q9Y243 479 aa6.09□□□□□ -1.43
HTT-210ENST00000512909 PEG3Q9GZU2 1588 aa6.09□□□□□ -1.43
HTT-210ENST00000512909 C9IYK1 514 aa6.08□□□□□ -1.44
HTT-210ENST00000512909 MEIS1O00470 390 aa6.08□□□□□ -1.44
HTT-210ENST00000512909 CD247P20963 164 aa6.08□□□□□ -1.44
HTT-210ENST00000512909 NMIQ13287 307 aaPredicted RBP6.08□□□□□ -1.44
HTT-210ENST00000512909 HSP90AA2PQ14568 343 aaPredicted RBP6.08□□□□□ -1.44
HTT-210ENST00000512909 NOL6Q9H6R4 1146 aaKnown RBP6.08□□□□□ -1.44
HTT-210ENST00000512909 CHST7Q9NS84 486 aa6.08□□□□□ -1.44
HTT-210ENST00000512909 GFOD1Q9NXC2 390 aa6.08□□□□□ -1.44
HTT-210ENST00000512909 DIS3Q9Y2L1 958 aaKnown RBP6.08□□□□□ -1.44
HTT-210ENST00000512909 CUX2O14529 1486 aa6.08□□□□□ -1.44
HTT-210ENST00000512909 TMEM265A0A087WTH1 108 aa6.07□□□□□ -1.44
HTT-210ENST00000512909 LRRN2O75325 713 aa6.07□□□□□ -1.44
HTT-210ENST00000512909 CEACAM5P06731 702 aa6.07□□□□□ -1.44
HTT-210ENST00000512909 LTKP29376 864 aa6.07□□□□□ -1.44
HTT-210ENST00000512909 NOP2P46087 812 aaKnown RBP6.07□□□□□ -1.44
HTT-210ENST00000512909 POU4F1Q01851 419 aa6.07□□□□□ -1.44
HTT-210ENST00000512909 RASA3Q14644 834 aa6.07□□□□□ -1.44
HTT-210ENST00000512909 ANKRD39Q53RE8 183 aa6.07□□□□□ -1.44
HTT-210ENST00000512909 PPFIBP1Q86W92 1011 aa6.07□□□□□ -1.44
HTT-210ENST00000512909 FAM181AQ8N9Y4 354 aa6.07□□□□□ -1.44
HTT-210ENST00000512909 DTWD2Q8NBA8 298 aa6.07□□□□□ -1.44
HTT-210ENST00000512909 NETO1Q8TDF5 533 aa6.07□□□□□ -1.44
HTT-210ENST00000512909 MICAL1Q8TDZ2 1067 aa6.07□□□□□ -1.44
HTT-210ENST00000512909 KLHL6Q8WZ60 621 aa6.07□□□□□ -1.44
HTT-210ENST00000512909 BRF1Q92994 677 aa6.07□□□□□ -1.44
HTT-210ENST00000512909 ZNF669Q96BR6 464 aaPredicted RBP6.07□□□□□ -1.44
HTT-210ENST00000512909 ZDHHC15Q96MV8 337 aa6.07□□□□□ -1.44
HTT-210ENST00000512909 PRDM14Q9GZV8 571 aa6.07□□□□□ -1.44
HTT-210ENST00000512909 SEMA6BQ9H3T3 888 aa6.07□□□□□ -1.44
HTT-210ENST00000512909 PIF1Q9H611 641 aa6.07□□□□□ -1.44
HTT-210ENST00000512909 MKNK2Q9HBH9 465 aa6.07□□□□□ -1.44
HTT-210ENST00000512909 GP6Q9HCN6 339 aa6.07□□□□□ -1.44
HTT-210ENST00000512909 ZSWIM5Q9P217 1185 aa6.07□□□□□ -1.44
HTT-210ENST00000512909 LAMC3Q9Y6N6 1575 aa6.06□□□□□ -1.44
HTT-210ENST00000512909 A0A087WZG4 1122 aa6.06□□□□□ -1.44
HTT-210ENST00000512909 TLDC2A0PJX2 215 aa6.06□□□□□ -1.44
HTT-210ENST00000512909 FAM221BA6H8Z2 402 aa6.06□□□□□ -1.44
HTT-210ENST00000512909 H3BS24 57 aa6.06□□□□□ -1.44
HTT-210ENST00000512909 DYRK3O43781 588 aa6.06□□□□□ -1.44
HTT-210ENST00000512909 KCNJ6P48051 423 aa6.06□□□□□ -1.44
HTT-210ENST00000512909 CLCN7P51798 805 aa6.06□□□□□ -1.44
HTT-210ENST00000512909 AMPD2Q01433 879 aa6.06□□□□□ -1.44
HTT-210ENST00000512909 IFI16Q16666 785 aaKnown RBP6.06□□□□□ -1.44
HTT-210ENST00000512909 C22orf34Q6ZV56 151 aa6.06□□□□□ -1.44
HTT-210ENST00000512909 FIBCD1Q8N539 461 aa6.06□□□□□ -1.44
HTT-210ENST00000512909 BVESQ8NE79 360 aa6.06□□□□□ -1.44
HTT-210ENST00000512909 ENOX1Q8TC92 643 aaKnown RBP6.06□□□□□ -1.44
HTT-210ENST00000512909 SGSM3Q96HU1 749 aa6.06□□□□□ -1.44
HTT-210ENST00000512909 SPATA9Q9BWV2 254 aa6.06□□□□□ -1.44
HTT-210ENST00000512909 KLHL25Q9H0H3 589 aa6.06□□□□□ -1.44
HTT-210ENST00000512909 PRR13Q9NZ81 148 aa6.06□□□□□ -1.44
HTT-210ENST00000512909 MSRB2Q9Y3D2 182 aa6.06□□□□□ -1.44
HTT-210ENST00000512909 ZNF451Q9Y4E5 1061 aa6.06□□□□□ -1.44
HTT-210ENST00000512909 CCDC88BA6NC98 1476 aa6.06□□□□□ -1.44
HTT-210ENST00000512909 TRAV20A0A0B4J274 112 aa6.05□□□□□ -1.44
HTT-210ENST00000512909 SIGLEC6O43699 453 aa6.05□□□□□ -1.44
HTT-210ENST00000512909 KCNH1O95259 989 aa6.05□□□□□ -1.44
HTT-210ENST00000512909 GSNP06396 782 aa6.05□□□□□ -1.44
HTT-210ENST00000512909 ZNF865P0CJ78 1059 aaPredicted RBP6.05□□□□□ -1.44
HTT-210ENST00000512909 ENDOUP21128 410 aaKnown RBP6.05□□□□□ -1.44
HTT-210ENST00000512909 PCBP3P57721 371 aaKnown RBP6.05□□□□□ -1.44
HTT-210ENST00000512909 TNK2Q07912 1038 aa6.05□□□□□ -1.44
HTT-210ENST00000512909 SLC10A6Q3KNW5 377 aa6.05□□□□□ -1.44
HTT-210ENST00000512909 INTS5Q6P9B9 1019 aaKnown RBP6.05□□□□□ -1.44
HTT-210ENST00000512909 HOMER1Q86YM7 354 aa6.05□□□□□ -1.44
HTT-210ENST00000512909 ZSWIM2Q8NEG5 633 aa6.05□□□□□ -1.44
HTT-210ENST00000512909 THAP3Q8WTV1 239 aaPredicted RBP6.05□□□□□ -1.44
HTT-210ENST00000512909 APPBP2Q92624 585 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms