RNA–Protein interactions for RNA: ENST00000512853.5

SNX25-205, Transcript of sorting nexin 25, humanhuman

TSL 1 (best)

Gene SNX25, Length 1,937 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-205ENST00000512853 BCAMP50895 628 aa13.06□□□□□ -0.32
SNX25-205ENST00000512853 ZNF174Q15697 407 aa13.06□□□□□ -0.32
SNX25-205ENST00000512853 TCP11X2Q5H9J9 407 aa13.06□□□□□ -0.32
SNX25-205ENST00000512853 ZNF658Q5TYW1 1059 aaPredicted RBP13.06□□□□□ -0.32
SNX25-205ENST00000512853 RRAGBQ5VZM2 374 aa13.06□□□□□ -0.32
SNX25-205ENST00000512853 WDR93Q6P2C0 686 aa13.06□□□□□ -0.32
SNX25-205ENST00000512853 ANKRD20A12PQ8NF67 263 aa13.06□□□□□ -0.32
SNX25-205ENST00000512853 RMND1Q9NWS8 449 aa13.06□□□□□ -0.32
SNX25-205ENST00000512853 TAB2Q9NYJ8 693 aa13.06□□□□□ -0.32
SNX25-205ENST00000512853 ZNF804BA4D1E1 1349 aa13.06□□□□□ -0.32
SNX25-205ENST00000512853 KCNJ18B7U540 433 aa13.05□□□□□ -0.32
SNX25-205ENST00000512853 RNF225M0QZC1 329 aaPredicted RBP13.05□□□□□ -0.32
SNX25-205ENST00000512853 GYS2P54840 703 aa13.05□□□□□ -0.32
SNX25-205ENST00000512853 TROAPQ12815 778 aa13.05□□□□□ -0.32
SNX25-205ENST00000512853 PTGDRQ13258 359 aa13.05□□□□□ -0.32
SNX25-205ENST00000512853 KCNJ12Q14500 433 aa13.05□□□□□ -0.32
SNX25-205ENST00000512853 NOM1Q5C9Z4 860 aaKnown RBP13.05□□□□□ -0.32
SNX25-205ENST00000512853 ADGRA1Q86SQ6 560 aa13.05□□□□□ -0.32
SNX25-205ENST00000512853 FAM71BQ8TC56 605 aa13.05□□□□□ -0.32
SNX25-205ENST00000512853 NELFBQ8WX92 580 aa13.05□□□□□ -0.32
SNX25-205ENST00000512853 MTRQ99707 1265 aa13.05□□□□□ -0.32
SNX25-205ENST00000512853 BRIP1Q9BX63 1249 aa13.05□□□□□ -0.32
SNX25-205ENST00000512853 LRP2BPQ9P2M1 347 aa13.05□□□□□ -0.32
SNX25-205ENST00000512853 MYO6Q9UM54 1294 aa13.05□□□□□ -0.32
SNX25-205ENST00000512853 REXO2Q9Y3B8 237 aaKnown RBP13.05□□□□□ -0.32
SNX25-205ENST00000512853 V9GY48 417 aaPredicted RBP13.05□□□□□ -0.32
SNX25-205ENST00000512853 COL1A1P02452 1464 aaPredicted RBP13.05□□□□□ -0.32
SNX25-205ENST00000512853 WNK3Q9BYP7 1800 aa13.05□□□□□ -0.32
SNX25-205ENST00000512853 MAGEB6P1A0A0J9YX57 407 aa13.05□□□□□ -0.32
SNX25-205ENST00000512853 A0A0U1RQG5 324 aaPredicted RBP13.05□□□□□ -0.32
SNX25-205ENST00000512853 MINDY4BA8MYZ0 360 aa13.05□□□□□ -0.32
SNX25-205ENST00000512853 ABL1P00519 1130 aa13.05□□□□□ -0.32
SNX25-205ENST00000512853 MCM6Q14566 821 aa13.05□□□□□ -0.32
SNX25-205ENST00000512853 CASP8Q14790 479 aa13.05□□□□□ -0.32
SNX25-205ENST00000512853 IFIT1BQ5T764 474 aaKnown RBP13.05□□□□□ -0.32
SNX25-205ENST00000512853 TRAPPC11Q7Z392 1133 aa13.05□□□□□ -0.32
SNX25-205ENST00000512853 SDR42E1Q8WUS8 393 aa13.05□□□□□ -0.32
SNX25-205ENST00000512853 RIOK1Q9BRS2 568 aaKnown RBP13.05□□□□□ -0.32
SNX25-205ENST00000512853 VPS18Q9P253 973 aa13.05□□□□□ -0.32
SNX25-205ENST00000512853 A0A1W2PQC6 194 aa13.04□□□□□ -0.32
SNX25-205ENST00000512853 PSMD14O00487 310 aa13.04□□□□□ -0.32
SNX25-205ENST00000512853 RHOXF2BP0C7M4 288 aa13.04□□□□□ -0.32
SNX25-205ENST00000512853 CDC25AP30304 524 aa13.04□□□□□ -0.32
SNX25-205ENST00000512853 KRT9P35527 623 aa13.04□□□□□ -0.32
SNX25-205ENST00000512853 SUSD4Q5VX71 490 aa13.04□□□□□ -0.32
SNX25-205ENST00000512853 ZNF662Q6ZS27 426 aa13.04□□□□□ -0.32
SNX25-205ENST00000512853 NOA1Q8NC60 698 aaKnown RBP13.04□□□□□ -0.32
SNX25-205ENST00000512853 NUP88Q99567 741 aaPredicted RBP13.04□□□□□ -0.32
SNX25-205ENST00000512853 SLF1Q9BQI6 1058 aa13.04□□□□□ -0.32
SNX25-205ENST00000512853 RHOXF2Q9BQY4 288 aa13.04□□□□□ -0.32
SNX25-205ENST00000512853 VPS16Q9H269 839 aa13.04□□□□□ -0.32
SNX25-205ENST00000512853 BLZF1Q9H2G9 400 aa13.04□□□□□ -0.32
SNX25-205ENST00000512853 ACBD3Q9H3P7 528 aa13.04□□□□□ -0.32
SNX25-205ENST00000512853 VIPAS39Q9H9C1 493 aa13.04□□□□□ -0.32
SNX25-205ENST00000512853 COL4A1P02462 1669 aa13.04□□□□□ -0.32
SNX25-205ENST00000512853 KIAA1551Q9HCM1 1747 aa13.04□□□□□ -0.32
SNX25-205ENST00000512853 MAST2Q6P0Q8 1798 aa13.04□□□□□ -0.32
SNX25-205ENST00000512853 hCG_1642624A0A1W2PR95 340 aa13.03□□□□□ -0.32
SNX25-205ENST00000512853 LGALS16A8MUM7 142 aa13.03□□□□□ -0.32
SNX25-205ENST00000512853 NDUFA10O95299 355 aa13.03□□□□□ -0.32
SNX25-205ENST00000512853 TFRCP02786 760 aaKnown RBP13.03□□□□□ -0.32
SNX25-205ENST00000512853 RPN1P04843 607 aaKnown RBP13.03□□□□□ -0.32
SNX25-205ENST00000512853 IVLP07476 585 aa13.03□□□□□ -0.32
SNX25-205ENST00000512853 IL17AQ16552 155 aa13.03□□□□□ -0.32
SNX25-205ENST00000512853 ARL6IP4Q66PJ3 421 aaKnown RBP13.03□□□□□ -0.32
SNX25-205ENST00000512853 DNAJC7Q99615 494 aa13.03□□□□□ -0.32
SNX25-205ENST00000512853 HAUS4Q9H6D7 363 aa13.03□□□□□ -0.32
SNX25-205ENST00000512853 MED4Q9NPJ6 270 aa13.03□□□□□ -0.32
SNX25-205ENST00000512853 FAN1Q9Y2M0 1017 aa13.03□□□□□ -0.32
SNX25-205ENST00000512853 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.03□□□□□ -0.32
SNX25-205ENST00000512853 DOT1LQ8TEK3 1739 aa13.03□□□□□ -0.32
SNX25-205ENST00000512853 H7C1D1 291 aa13.03□□□□□ -0.32
SNX25-205ENST00000512853 SMIM22K7EJ46 135 aa13.03□□□□□ -0.32
SNX25-205ENST00000512853 LONP1P36776 959 aaKnown RBP13.03□□□□□ -0.32
SNX25-205ENST00000512853 IGHMBP2P38935 993 aaKnown RBP13.03□□□□□ -0.32
SNX25-205ENST00000512853 AARSP49588 968 aaKnown RBP eCLIP13.03□□□□□ -0.32
SNX25-205ENST00000512853 EVA1CP58658 441 aa13.03□□□□□ -0.32
SNX25-205ENST00000512853 CCDC152Q4G0S7 254 aa13.03□□□□□ -0.32
SNX25-205ENST00000512853 IQCA1Q86XH1 822 aa13.03□□□□□ -0.32
SNX25-205ENST00000512853 STAMQ92783 540 aa13.03□□□□□ -0.32
SNX25-205ENST00000512853 SUGCTQ9HAC7 445 aa13.03□□□□□ -0.32
SNX25-205ENST00000512853 EPN1Q9Y6I3 576 aaPredicted RBP13.03□□□□□ -0.32
SNX25-205ENST00000512853 PDS5AQ29RF7 1337 aaKnown RBP13.03□□□□□ -0.32
SNX25-205ENST00000512853 CASZ1Q86V15 1759 aa13.02□□□□□ -0.32
SNX25-205ENST00000512853 ORC4O43929 436 aa13.02□□□□□ -0.32
SNX25-205ENST00000512853 N4BP1O75113 896 aaKnown RBP13.02□□□□□ -0.32
SNX25-205ENST00000512853 TRHP20396 242 aaPredicted RBP13.02□□□□□ -0.32
SNX25-205ENST00000512853 USP14P54578 494 aa13.02□□□□□ -0.32
SNX25-205ENST00000512853 SEMA3FQ13275 785 aa13.02□□□□□ -0.32
SNX25-205ENST00000512853 PARP10Q53GL7 1025 aa13.02□□□□□ -0.32
SNX25-205ENST00000512853 LEKR1Q6ZMV7 388 aa13.02□□□□□ -0.32
SNX25-205ENST00000512853 IRF2BP1Q8IU81 584 aa13.02□□□□□ -0.32
SNX25-205ENST00000512853 ADSSL1Q8N142 457 aa13.02□□□□□ -0.32
SNX25-205ENST00000512853 MB21D1Q8N884 522 aa13.02□□□□□ -0.32
SNX25-205ENST00000512853 MYH1P12882 1939 aa13.02□□□□□ -0.33
SNX25-205ENST00000512853 COBLO75128 1261 aa13.01□□□□□ -0.33
SNX25-205ENST00000512853 PARP1P09874 1014 aaKnown RBP13.01□□□□□ -0.33
SNX25-205ENST00000512853 SCG2P13521 617 aa13.01□□□□□ -0.33
SNX25-205ENST00000512853 MCM3P25205 808 aa13.01□□□□□ -0.33
SNX25-205ENST00000512853 EEF1GP26641 437 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms