RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 EDAQ92838 391 aa11.78□□□□□ -0.52
CLCN3-208ENST00000512813 LENG1Q96BZ8 264 aaPredicted RBP11.78□□□□□ -0.52
CLCN3-208ENST00000512813 VWCEQ96DN2 955 aa11.78□□□□□ -0.52
CLCN3-208ENST00000512813 C12orf42Q96LP6 360 aa11.78□□□□□ -0.52
CLCN3-208ENST00000512813 HIPK3Q9H422 1215 aa11.78□□□□□ -0.52
CLCN3-208ENST00000512813 FAM50BQ9Y247 325 aa11.78□□□□□ -0.52
CLCN3-208ENST00000512813 UMODL1Q5DID0 1318 aa11.78□□□□□ -0.52
CLCN3-208ENST00000512813 SIPA1L1O43166 1804 aa11.77□□□□□ -0.52
CLCN3-208ENST00000512813 TMEM221A6NGB7 291 aa11.77□□□□□ -0.53
CLCN3-208ENST00000512813 M0R296 226 aa11.77□□□□□ -0.53
CLCN3-208ENST00000512813 COL9A2Q14055 689 aaPredicted RBP11.77□□□□□ -0.53
CLCN3-208ENST00000512813 KCNA10Q16322 511 aa11.77□□□□□ -0.53
CLCN3-208ENST00000512813 METTL24Q5JXM2 366 aa11.77□□□□□ -0.53
CLCN3-208ENST00000512813 G2E3Q7L622 706 aa11.77□□□□□ -0.53
CLCN3-208ENST00000512813 FBXL6Q8N531 539 aa11.77□□□□□ -0.53
CLCN3-208ENST00000512813 GDPD5Q8WTR4 605 aa11.77□□□□□ -0.53
CLCN3-208ENST00000512813 SLC9A7Q96T83 725 aa11.77□□□□□ -0.53
CLCN3-208ENST00000512813 FSD1Q9BTV5 496 aa11.77□□□□□ -0.53
CLCN3-208ENST00000512813 STK31Q9BXU1 1019 aa11.77□□□□□ -0.53
CLCN3-208ENST00000512813 WNT8AQ9H1J5 351 aa11.77□□□□□ -0.53
CLCN3-208ENST00000512813 IFT57Q9NWB7 429 aa11.77□□□□□ -0.53
CLCN3-208ENST00000512813 CLSPNQ9HAW4 1339 aa11.77□□□□□ -0.53
CLCN3-208ENST00000512813 SPDYE16A6NNV3 312 aaPredicted RBP11.76□□□□□ -0.53
CLCN3-208ENST00000512813 IFIT1P09914 478 aaKnown RBP11.76□□□□□ -0.53
CLCN3-208ENST00000512813 FGFR2P21802 821 aa11.76□□□□□ -0.53
CLCN3-208ENST00000512813 CST5P28325 142 aaPredicted RBP11.76□□□□□ -0.53
CLCN3-208ENST00000512813 NBL1P41271 181 aa11.76□□□□□ -0.53
CLCN3-208ENST00000512813 RHBDL3P58872 404 aa11.76□□□□□ -0.53
CLCN3-208ENST00000512813 JAG1P78504 1218 aa11.76□□□□□ -0.53
CLCN3-208ENST00000512813 TTLL4Q14679 1199 aa11.76□□□□□ -0.53
CLCN3-208ENST00000512813 CATSPERGQ6ZRH7 1159 aa11.76□□□□□ -0.53
CLCN3-208ENST00000512813 TRIM67Q6ZTA4 783 aa11.76□□□□□ -0.53
CLCN3-208ENST00000512813 SPRED2Q7Z698 418 aa11.76□□□□□ -0.53
CLCN3-208ENST00000512813 ABRAQ8N0Z2 381 aa11.76□□□□□ -0.53
CLCN3-208ENST00000512813 SHCBP1Q8NEM2 672 aa11.76□□□□□ -0.53
CLCN3-208ENST00000512813 MOV10L1Q9BXT6 1211 aaKnown RBP11.76□□□□□ -0.53
CLCN3-208ENST00000512813 GINM1Q9NU53 330 aa11.76□□□□□ -0.53
CLCN3-208ENST00000512813 PFKMP08237 780 aa11.75□□□□□ -0.53
CLCN3-208ENST00000512813 ZNF865P0CJ78 1059 aaPredicted RBP11.75□□□□□ -0.53
CLCN3-208ENST00000512813 BTDP43251 543 aa11.75□□□□□ -0.53
CLCN3-208ENST00000512813 CCL23P55773 120 aa11.75□□□□□ -0.53
CLCN3-208ENST00000512813 PUM3Q15397 648 aaKnown RBP11.75□□□□□ -0.53
CLCN3-208ENST00000512813 LRRC24Q50LG9 513 aa11.75□□□□□ -0.53
CLCN3-208ENST00000512813 DGLUCYQ7Z3D6 616 aa11.75□□□□□ -0.53
CLCN3-208ENST00000512813 PHOSPHO2Q8TCD6 241 aa11.75□□□□□ -0.53
CLCN3-208ENST00000512813 FAM163AQ96GL9 167 aaPredicted RBP11.75□□□□□ -0.53
CLCN3-208ENST00000512813 EP300Q09472 2414 aaPredicted RBP11.75□□□□□ -0.53
CLCN3-208ENST00000512813 CEP250Q9BV73 2442 aa11.75□□□□□ -0.53
CLCN3-208ENST00000512813 MYADML2A6NDP7 307 aa11.74□□□□□ -0.53
CLCN3-208ENST00000512813 H3BQ06 376 aaPredicted RBP11.74□□□□□ -0.53
CLCN3-208ENST00000512813 TAL1P17542 331 aaPredicted RBP11.74□□□□□ -0.53
CLCN3-208ENST00000512813 GNAI1P63096 354 aa11.74□□□□□ -0.53
CLCN3-208ENST00000512813 SLF2Q8IX21 1173 aa11.74□□□□□ -0.53
CLCN3-208ENST00000512813 PCSK9Q8NBP7 692 aaKnown RBP11.74□□□□□ -0.53
CLCN3-208ENST00000512813 POP1Q99575 1024 aaKnown RBP11.74□□□□□ -0.53
CLCN3-208ENST00000512813 NOC4LQ9BVI4 516 aaKnown RBP11.74□□□□□ -0.53
CLCN3-208ENST00000512813 ZBTB21Q9ULJ3 1066 aa11.74□□□□□ -0.53
CLCN3-208ENST00000512813 MROH7-TTC4A0A0A0MT08 1334 aa11.73□□□□□ -0.53
CLCN3-208ENST00000512813 KIF28PB7ZC32 967 aa11.73□□□□□ -0.53
CLCN3-208ENST00000512813 H0Y858 1186 aa11.73□□□□□ -0.53
CLCN3-208ENST00000512813 ASGR1P07306 291 aa11.73□□□□□ -0.53
CLCN3-208ENST00000512813 VCAM1P19320 739 aa11.73□□□□□ -0.53
CLCN3-208ENST00000512813 ERCC3P19447 782 aa11.73□□□□□ -0.53
CLCN3-208ENST00000512813 NUBP1P53384 320 aa11.73□□□□□ -0.53
CLCN3-208ENST00000512813 VCPP55072 806 aaKnown RBP11.73□□□□□ -0.53
CLCN3-208ENST00000512813 FLIIQ13045 1269 aa11.73□□□□□ -0.53
CLCN3-208ENST00000512813 SHROOM1Q2M3G4 852 aaPredicted RBP11.73□□□□□ -0.53
CLCN3-208ENST00000512813 RNF135Q8IUD6 432 aa11.73□□□□□ -0.53
CLCN3-208ENST00000512813 HERC6Q8IVU3 1022 aa11.73□□□□□ -0.53
CLCN3-208ENST00000512813 TSPYL6Q8N831 410 aa11.73□□□□□ -0.53
CLCN3-208ENST00000512813 TINF2Q9BSI4 451 aa11.73□□□□□ -0.53
CLCN3-208ENST00000512813 SPATC1LQ9H0A9 340 aa11.73□□□□□ -0.53
CLCN3-208ENST00000512813 TLR9Q9NR96 1032 aa11.73□□□□□ -0.53
CLCN3-208ENST00000512813 RNF216Q9NWF9 866 aaPredicted RBP11.73□□□□□ -0.53
CLCN3-208ENST00000512813 GPR179Q6PRD1 2367 aa11.72□□□□□ -0.53
CLCN3-208ENST00000512813 GRM8O00222 908 aa11.72□□□□□ -0.53
CLCN3-208ENST00000512813 MAP4K4O95819 1239 aaPredicted RBP11.72□□□□□ -0.53
CLCN3-208ENST00000512813 FKBP5Q13451 457 aaPredicted RBP11.72□□□□□ -0.53
CLCN3-208ENST00000512813 DZIP1Q86YF9 867 aaKnown RBP11.72□□□□□ -0.53
CLCN3-208ENST00000512813 CCDC146Q8IYE0 955 aa11.72□□□□□ -0.53
CLCN3-208ENST00000512813 SLC43A3Q8NBI5 491 aa11.72□□□□□ -0.53
CLCN3-208ENST00000512813 VTI1AQ96AJ9 217 aa11.72□□□□□ -0.53
CLCN3-208ENST00000512813 RMDN1Q96DB5 314 aa11.72□□□□□ -0.53
CLCN3-208ENST00000512813 MROH8Q9H579 483 aa11.72□□□□□ -0.53
CLCN3-208ENST00000512813 DNAJC18Q9H819 358 aa11.72□□□□□ -0.53
CLCN3-208ENST00000512813 COL11A1P12107 1806 aaPredicted RBP11.72□□□□□ -0.53
CLCN3-208ENST00000512813 GPR75-ASB3A0A0A6YYF3 556 aa11.71□□□□□ -0.53
CLCN3-208ENST00000512813 GDF11O95390 407 aa11.71□□□□□ -0.53
CLCN3-208ENST00000512813 ACAP1Q15027 740 aa11.71□□□□□ -0.53
CLCN3-208ENST00000512813 ADSSL1Q8N142 457 aa11.71□□□□□ -0.53
CLCN3-208ENST00000512813 ZGPATQ8N5A5 531 aaKnown RBP11.71□□□□□ -0.53
CLCN3-208ENST00000512813 SUGCTQ9HAC7 445 aa11.71□□□□□ -0.53
CLCN3-208ENST00000512813 PI4KBQ9UBF8 816 aa11.71□□□□□ -0.53
CLCN3-208ENST00000512813 SIP14410 1827 aa11.71□□□□□ -0.54
CLCN3-208ENST00000512813 SEMA3EO15041 775 aa11.7□□□□□ -0.54
CLCN3-208ENST00000512813 DUSP11O75319 330 aaKnown RBP11.7□□□□□ -0.54
CLCN3-208ENST00000512813 C6orf222P0C671 652 aaPredicted RBP11.7□□□□□ -0.54
CLCN3-208ENST00000512813 ACTN1P12814 892 aa11.7□□□□□ -0.54
CLCN3-208ENST00000512813 AVPR2P30518 371 aa11.7□□□□□ -0.54
CLCN3-208ENST00000512813 DSG3P32926 999 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms