RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 TFCP2Q12800 502 aa8.85□□□□□ -0.99
USP46-208ENST00000512656 RASGRF1Q13972 1273 aa8.85□□□□□ -0.99
USP46-208ENST00000512656 SLC4A8Q2Y0W8 1093 aa8.85□□□□□ -0.99
USP46-208ENST00000512656 FASTKD5Q7L8L6 764 aaKnown RBP8.85□□□□□ -0.99
USP46-208ENST00000512656 XAGE2Q96GT9 111 aa8.85□□□□□ -0.99
USP46-208ENST00000512656 NEUROD6Q96NK8 337 aa8.85□□□□□ -0.99
USP46-208ENST00000512656 PARK7Q99497 189 aaKnown RBP8.85□□□□□ -0.99
USP46-208ENST00000512656 PICK1Q9NRD5 415 aa8.85□□□□□ -0.99
USP46-208ENST00000512656 DNMT3LQ9UJW3 386 aa8.85□□□□□ -0.99
USP46-208ENST00000512656 PTCH2Q9Y6C5 1203 aa8.85□□□□□ -0.99
USP46-208ENST00000512656 PPFIA3O75145 1194 aa8.84□□□□□ -0.99
USP46-208ENST00000512656 G3BP1Q13283 466 aaKnown RBP eCLIP8.84□□□□□ -0.99
USP46-208ENST00000512656 C17orf99Q6UX52 265 aa8.84□□□□□ -0.99
USP46-208ENST00000512656 ATF7IPQ6VMQ6 1270 aa8.84□□□□□ -0.99
USP46-208ENST00000512656 ERICH6Q7L0X2 663 aa8.84□□□□□ -0.99
USP46-208ENST00000512656 SCYL3Q8IZE3 742 aa8.84□□□□□ -0.99
USP46-208ENST00000512656 ZSCAN1Q8NBB4 408 aa8.84□□□□□ -0.99
USP46-208ENST00000512656 TRIM34Q9BYJ4 488 aa8.84□□□□□ -0.99
USP46-208ENST00000512656 ZHX2Q9Y6X8 837 aa8.84□□□□□ -0.99
USP46-208ENST00000512656 MYH13Q9UKX3 1938 aa8.84□□□□□ -1
USP46-208ENST00000512656 MROH7-TTC4A0A0A0MT08 1334 aa8.83□□□□□ -1
USP46-208ENST00000512656 ESPNB1AK53 854 aa8.83□□□□□ -1
USP46-208ENST00000512656 CTNND1O60716 968 aaKnown RBP8.83□□□□□ -1
USP46-208ENST00000512656 UQCRFS1P1P0C7P4 283 aa8.83□□□□□ -1
USP46-208ENST00000512656 EN2P19622 333 aaPredicted RBP8.83□□□□□ -1
USP46-208ENST00000512656 BTDP43251 543 aa8.83□□□□□ -1
USP46-208ENST00000512656 PSMC4P43686 418 aa8.83□□□□□ -1
USP46-208ENST00000512656 CAP1Q01518 475 aa8.83□□□□□ -1
USP46-208ENST00000512656 MAP3K10Q02779 954 aa8.83□□□□□ -1
USP46-208ENST00000512656 CBLBQ13191 982 aa8.83□□□□□ -1
USP46-208ENST00000512656 ZFPM1Q8IX07 1006 aa8.83□□□□□ -1
USP46-208ENST00000512656 SPATA5Q8NB90 893 aa8.83□□□□□ -1
USP46-208ENST00000512656 FRAT1Q92837 279 aaPredicted RBP8.83□□□□□ -1
USP46-208ENST00000512656 NOL10Q9BSC4 688 aaKnown RBP8.83□□□□□ -1
USP46-208ENST00000512656 CPA4Q9UI42 421 aa8.83□□□□□ -1
USP46-208ENST00000512656 MKI67P46013 3256 aaKnown RBP8.83□□□□□ -1
USP46-208ENST00000512656 AK9Q5TCS8 1911 aa8.82□□□□□ -1
USP46-208ENST00000512656 GPR75-ASB3A0A0A6YYF3 556 aa8.82□□□□□ -1
USP46-208ENST00000512656 A0A0G2JLL6 359 aaPredicted RBP8.82□□□□□ -1
USP46-208ENST00000512656 PHF20L1A8MW92 1017 aa8.82□□□□□ -1
USP46-208ENST00000512656 TRIM27P14373 513 aa8.82□□□□□ -1
USP46-208ENST00000512656 LORP23490 312 aaPredicted RBP8.82□□□□□ -1
USP46-208ENST00000512656 FCGRTP55899 365 aa8.82□□□□□ -1
USP46-208ENST00000512656 MECOMQ03112 1051 aa8.82□□□□□ -1
USP46-208ENST00000512656 PICALMQ13492 652 aa8.82□□□□□ -1
USP46-208ENST00000512656 GADL1Q6ZQY3 521 aa8.82□□□□□ -1
USP46-208ENST00000512656 PRRT2Q7Z6L0 340 aaPredicted RBP8.82□□□□□ -1
USP46-208ENST00000512656 RAET1EQ8TD07 263 aa8.82□□□□□ -1
USP46-208ENST00000512656 SH3TC2Q8TF17 1288 aa8.82□□□□□ -1
USP46-208ENST00000512656 ARHGAP39Q9C0H5 1083 aa8.82□□□□□ -1
USP46-208ENST00000512656 HMG20BQ9P0W2 317 aa8.82□□□□□ -1
USP46-208ENST00000512656 SRRDQ9UH36 339 aa8.82□□□□□ -1
USP46-208ENST00000512656 SLC45A1Q9Y2W3 748 aa8.82□□□□□ -1
USP46-208ENST00000512656 ATRNL1Q5VV63 1379 aa8.82□□□□□ -1
USP46-208ENST00000512656 ADGRA2Q96PE1 1338 aa8.81□□□□□ -1
USP46-208ENST00000512656 DDTLA6NHG4 134 aaPredicted RBP8.81□□□□□ -1
USP46-208ENST00000512656 IGSF3O75054 1194 aa8.81□□□□□ -1
USP46-208ENST00000512656 MYCP01106 439 aaPredicted RBP8.81□□□□□ -1
USP46-208ENST00000512656 PTPRAP18433 802 aa8.81□□□□□ -1
USP46-208ENST00000512656 ARID4AP29374 1257 aaPredicted RBP8.81□□□□□ -1
USP46-208ENST00000512656 GRK4P32298 578 aa8.81□□□□□ -1
USP46-208ENST00000512656 UBXN2AP68543 259 aa8.81□□□□□ -1
USP46-208ENST00000512656 OS9Q13438 667 aaPredicted RBP8.81□□□□□ -1
USP46-208ENST00000512656 MOGSQ13724 837 aa8.81□□□□□ -1
USP46-208ENST00000512656 ZKSCAN2Q63HK3 967 aa8.81□□□□□ -1
USP46-208ENST00000512656 GPAT2Q6NUI2 795 aa8.81□□□□□ -1
USP46-208ENST00000512656 CLUAP1Q96AJ1 413 aa8.81□□□□□ -1
USP46-208ENST00000512656 NSUN4Q96CB9 384 aaKnown RBP8.81□□□□□ -1
USP46-208ENST00000512656 DDX4Q9NQI0 724 aaKnown RBP8.81□□□□□ -1
USP46-208ENST00000512656 RAI14Q9P0K7 980 aa8.81□□□□□ -1
USP46-208ENST00000512656 LRP2BPQ9P2M1 347 aa8.81□□□□□ -1
USP46-208ENST00000512656 BIN2Q9UBW5 565 aaPredicted RBP8.81□□□□□ -1
USP46-208ENST00000512656 AFG3L2Q9Y4W6 797 aa8.81□□□□□ -1
USP46-208ENST00000512656 RFX7Q2KHR2 1363 aa8.81□□□□□ -1
USP46-208ENST00000512656 RBBP6Q7Z6E9 1792 aaKnown RBP8.81□□□□□ -1
USP46-208ENST00000512656 MYPNQ86TC9 1320 aa8.8□□□□□ -1
USP46-208ENST00000512656 BCAR3O75815 825 aa8.8□□□□□ -1
USP46-208ENST00000512656 BAG3O95817 575 aa8.8□□□□□ -1
USP46-208ENST00000512656 CYP2C8P10632 490 aa8.8□□□□□ -1
USP46-208ENST00000512656 BCRP11274 1271 aa8.8□□□□□ -1
USP46-208ENST00000512656 CAPN2P17655 700 aa8.8□□□□□ -1
USP46-208ENST00000512656 RHBDL3P58872 404 aa8.8□□□□□ -1
USP46-208ENST00000512656 MCCD1P59942 119 aaPredicted RBP8.8□□□□□ -1
USP46-208ENST00000512656 PABPC4Q13310 644 aaKnown RBP eCLIP8.8□□□□□ -1
USP46-208ENST00000512656 CCDC158Q5M9N0 1113 aa8.8□□□□□ -1
USP46-208ENST00000512656 BANK1Q8NDB2 785 aa8.8□□□□□ -1
USP46-208ENST00000512656 IL27Q8NEV9 243 aa8.8□□□□□ -1
USP46-208ENST00000512656 SMCR8Q8TEV9 937 aaPredicted RBP8.8□□□□□ -1
USP46-208ENST00000512656 ZNF592Q92610 1267 aa8.8□□□□□ -1
USP46-208ENST00000512656 OSBPL5Q9H0X9 879 aaPredicted RBP8.8□□□□□ -1
USP46-208ENST00000512656 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.8□□□□□ -1
USP46-208ENST00000512656 GPR108Q9NPR9 543 aa8.8□□□□□ -1
USP46-208ENST00000512656 HERC5Q9UII4 1024 aaKnown RBP8.8□□□□□ -1
USP46-208ENST00000512656 MYH2Q9UKX2 1941 aa8.8□□□□□ -1
USP46-208ENST00000512656 COL2A1P02458 1487 aaPredicted RBP8.79□□□□□ -1
USP46-208ENST00000512656 PNMA6EA0A0J9YXQ4 647 aa8.79□□□□□ -1
USP46-208ENST00000512656 TRIM75PA6NK02 468 aa8.79□□□□□ -1
USP46-208ENST00000512656 ZBBXA8MT70 800 aa8.79□□□□□ -1
USP46-208ENST00000512656 TTC39AQ5SRH9 613 aa8.79□□□□□ -1
USP46-208ENST00000512656 NAA16Q6N069 864 aaPredicted RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms