RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 VWA3BQ502W6 1294 aa9.81□□□□□ -0.84
VCAN-208ENST00000512590 C7orf31Q8N865 590 aa9.81□□□□□ -0.84
VCAN-208ENST00000512590 PPP1R14AQ96A00 147 aa9.81□□□□□ -0.84
VCAN-208ENST00000512590 RPF1Q9H9Y2 349 aaKnown RBP9.81□□□□□ -0.84
VCAN-208ENST00000512590 RAD18Q9NS91 495 aa9.81□□□□□ -0.84
VCAN-208ENST00000512590 CD109Q6YHK3 1445 aa9.81□□□□□ -0.84
VCAN-208ENST00000512590 FAM47E-STBD1D6RA91 191 aa9.81□□□□□ -0.84
VCAN-208ENST00000512590 TMCC1O94876 653 aa9.81□□□□□ -0.84
VCAN-208ENST00000512590 GARSP41250 739 aaKnown RBP9.81□□□□□ -0.84
VCAN-208ENST00000512590 COG7P83436 770 aa9.81□□□□□ -0.84
VCAN-208ENST00000512590 C16orf62Q7Z3J2 963 aa9.81□□□□□ -0.84
VCAN-208ENST00000512590 MAGEB10Q96LZ2 347 aaPredicted RBP9.81□□□□□ -0.84
VCAN-208ENST00000512590 DISC1Q9NRI5 854 aa9.81□□□□□ -0.84
VCAN-208ENST00000512590 ANGEL1Q9UNK9 670 aaKnown RBP9.81□□□□□ -0.84
VCAN-208ENST00000512590 ADAMTS8Q9UP79 889 aa9.81□□□□□ -0.84
VCAN-208ENST00000512590 HYOU1Q9Y4L1 999 aa9.81□□□□□ -0.84
VCAN-208ENST00000512590 TTC21BQ7Z4L5 1316 aa9.8□□□□□ -0.84
VCAN-208ENST00000512590 RNASE9P60153 205 aaKnown RBP9.8□□□□□ -0.84
VCAN-208ENST00000512590 ANKRD36BP1Q96IX9 119 aa9.8□□□□□ -0.84
VCAN-208ENST00000512590 PPP2R1AP30153 589 aa9.8□□□□□ -0.84
VCAN-208ENST00000512590 PHEXP78562 749 aa9.8□□□□□ -0.84
VCAN-208ENST00000512590 ADCY1Q08828 1119 aa9.8□□□□□ -0.84
VCAN-208ENST00000512590 OOSP2Q86WS3 158 aa9.8□□□□□ -0.84
VCAN-208ENST00000512590 GTF2H3Q13889 308 aa9.8□□□□□ -0.84
VCAN-208ENST00000512590 RINT1Q6NUQ1 792 aa9.8□□□□□ -0.84
VCAN-208ENST00000512590 KIAA0825Q8IV33 1275 aa9.8□□□□□ -0.84
VCAN-208ENST00000512590 IWS1Q96ST2 819 aa9.8□□□□□ -0.84
VCAN-208ENST00000512590 FAN1Q9Y2M0 1017 aa9.8□□□□□ -0.84
VCAN-208ENST00000512590 SMCO2A6NFE2 343 aa9.8□□□□□ -0.84
VCAN-208ENST00000512590 GNGT2O14610 69 aa9.8□□□□□ -0.84
VCAN-208ENST00000512590 BCRP11274 1271 aa9.8□□□□□ -0.84
VCAN-208ENST00000512590 ATP1A2P50993 1020 aa9.8□□□□□ -0.84
VCAN-208ENST00000512590 UBXN1Q04323 297 aa9.8□□□□□ -0.84
VCAN-208ENST00000512590 SLC9C1Q4G0N8 1177 aa9.8□□□□□ -0.84
VCAN-208ENST00000512590 PDZD8Q8NEN9 1154 aa9.8□□□□□ -0.84
VCAN-208ENST00000512590 LARP6Q9BRS8 491 aaKnown RBP9.8□□□□□ -0.84
VCAN-208ENST00000512590 MRPL44Q9H9J2 332 aaKnown RBP9.8□□□□□ -0.84
VCAN-208ENST00000512590 SLC38A10Q9HBR0 1119 aa9.8□□□□□ -0.84
VCAN-208ENST00000512590 SCUBE2Q9NQ36 999 aa9.8□□□□□ -0.84
VCAN-208ENST00000512590 HMG20BQ9P0W2 317 aa9.8□□□□□ -0.84
VCAN-208ENST00000512590 ZW10O43264 779 aa9.8□□□□□ -0.84
VCAN-208ENST00000512590 ERN1O75460 977 aaKnown RBP9.8□□□□□ -0.84
VCAN-208ENST00000512590 CYBBP04839 570 aa9.8□□□□□ -0.84
VCAN-208ENST00000512590 LACTBP83111 547 aaPredicted RBP9.8□□□□□ -0.84
VCAN-208ENST00000512590 CHAMP1Q96JM3 812 aa9.8□□□□□ -0.84
VCAN-208ENST00000512590 PPP1R16BQ96T49 567 aa9.8□□□□□ -0.84
VCAN-208ENST00000512590 EDEM3Q9BZQ6 932 aa9.8□□□□□ -0.84
VCAN-208ENST00000512590 SENP1Q9P0U3 644 aa9.8□□□□□ -0.84
VCAN-208ENST00000512590 KLF15Q9UIH9 416 aa9.8□□□□□ -0.84
VCAN-208ENST00000512590 PIK3R4Q99570 1358 aa9.79□□□□□ -0.84
VCAN-208ENST00000512590 CLRN2A0PK11 232 aa9.79□□□□□ -0.84
VCAN-208ENST00000512590 CUL1Q13616 776 aa9.79□□□□□ -0.84
VCAN-208ENST00000512590 NOLC1Q14978 699 aaKnown RBP eCLIP9.79□□□□□ -0.84
VCAN-208ENST00000512590 ASIC2Q16515 512 aa9.79□□□□□ -0.84
VCAN-208ENST00000512590 CCDC93Q567U6 631 aa9.79□□□□□ -0.84
VCAN-208ENST00000512590 CCDC26Q8TAB7 109 aa9.79□□□□□ -0.84
VCAN-208ENST00000512590 SMYD2Q9NRG4 433 aa9.79□□□□□ -0.84
VCAN-208ENST00000512590 BCAP29Q9UHQ4 241 aa9.79□□□□□ -0.84
VCAN-208ENST00000512590 MAP3K15Q6ZN16 1313 aa9.79□□□□□ -0.84
VCAN-208ENST00000512590 TNRQ92752 1358 aa9.79□□□□□ -0.84
VCAN-208ENST00000512590 PRPF4O43172 522 aaKnown RBP eCLIP9.79□□□□□ -0.84
VCAN-208ENST00000512590 GCKP35557 465 aa9.79□□□□□ -0.84
VCAN-208ENST00000512590 MIS18BP1Q6P0N0 1132 aa9.79□□□□□ -0.84
VCAN-208ENST00000512590 CTAGE3PQ8IX95 158 aa9.79□□□□□ -0.84
VCAN-208ENST00000512590 VMP1Q96GC9 406 aa9.79□□□□□ -0.84
VCAN-208ENST00000512590 RAB20Q9NX57 234 aa9.79□□□□□ -0.84
VCAN-208ENST00000512590 USH1CQ9Y6N9 552 aa9.79□□□□□ -0.84
VCAN-208ENST00000512590 GAPVD1Q14C86 1478 aa9.79□□□□□ -0.84
VCAN-208ENST00000512590 RAD51Q06609 339 aa9.79□□□□□ -0.84
VCAN-208ENST00000512590 FAM186BQ8IYM0 893 aa9.79□□□□□ -0.84
VCAN-208ENST00000512590 SIX6OS1Q8N1H7 587 aa9.79□□□□□ -0.84
VCAN-208ENST00000512590 SCG3Q8WXD2 468 aaKnown RBP9.79□□□□□ -0.84
VCAN-208ENST00000512590 FAM149B1Q96BN6 582 aa9.79□□□□□ -0.84
VCAN-208ENST00000512590 LRRC4Q9HBW1 653 aa9.79□□□□□ -0.84
VCAN-208ENST00000512590 CTTNBP2NLQ9P2B4 639 aa9.79□□□□□ -0.84
VCAN-208ENST00000512590 SEPT9Q9UHD8 586 aaPredicted RBP9.79□□□□□ -0.84
VCAN-208ENST00000512590 BRPF3Q9ULD4 1205 aa9.79□□□□□ -0.84
VCAN-208ENST00000512590 ORC6Q9Y5N6 252 aa9.79□□□□□ -0.84
VCAN-208ENST00000512590 KRT87PA6NCN2 255 aa9.79□□□□□ -0.84
VCAN-208ENST00000512590 SPTLC2O15270 562 aa9.79□□□□□ -0.84
VCAN-208ENST00000512590 ARHGDIAP52565 204 aa9.79□□□□□ -0.84
VCAN-208ENST00000512590 CLNS1AP54105 237 aaKnown RBP9.79□□□□□ -0.84
VCAN-208ENST00000512590 ZC3H12BQ5HYM0 836 aaKnown RBP9.79□□□□□ -0.84
VCAN-208ENST00000512590 HHATQ5VTY9 493 aa9.79□□□□□ -0.84
VCAN-208ENST00000512590 CCDC62Q6P9F0 684 aa9.79□□□□□ -0.84
VCAN-208ENST00000512590 MAPKAPK5Q8IW41 473 aa9.79□□□□□ -0.84
VCAN-208ENST00000512590 CCDC124Q96CT7 223 aaKnown RBP9.79□□□□□ -0.84
VCAN-208ENST00000512590 TXKP42681 527 aa9.78□□□□□ -0.84
VCAN-208ENST00000512590 CPLX4Q7Z7G2 160 aa9.78□□□□□ -0.84
VCAN-208ENST00000512590 CACTINQ8WUQ7 758 aaKnown RBP9.78□□□□□ -0.84
VCAN-208ENST00000512590 CCDC138Q96M89 665 aa9.78□□□□□ -0.84
VCAN-208ENST00000512590 AATFQ9NY61 560 aaKnown RBP eCLIP9.78□□□□□ -0.84
VCAN-208ENST00000512590 DAAM1Q9Y4D1 1078 aa9.78□□□□□ -0.84
VCAN-208ENST00000512590 INO80B-WBP1J3KQ70 363 aa9.78□□□□□ -0.84
VCAN-208ENST00000512590 SCNN1DP51172 638 aa9.78□□□□□ -0.84
VCAN-208ENST00000512590 ZNF653Q96CK0 615 aa9.78□□□□□ -0.84
VCAN-208ENST00000512590 RILPQ96NA2 401 aa9.78□□□□□ -0.84
VCAN-208ENST00000512590 INO80BQ9C086 356 aaPredicted RBP9.78□□□□□ -0.84
VCAN-208ENST00000512590 NR2E3Q9Y5X4 410 aa9.78□□□□□ -0.84
VCAN-208ENST00000512590 PI4KAP2A4QPH2 592 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms