RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-231ENST00000512340 A0A1W2PRG0 241 aa8.76□□□□□ -1.01
NR1I3-231ENST00000512340 TNPO2O14787 897 aaKnown RBP8.76□□□□□ -1.01
NR1I3-231ENST00000512340 FOXP2O15409 715 aa8.76□□□□□ -1.01
NR1I3-231ENST00000512340 SLC25A27O95847 323 aa8.76□□□□□ -1.01
NR1I3-231ENST00000512340 MCM5P33992 734 aa8.76□□□□□ -1.01
NR1I3-231ENST00000512340 PSMC4P43686 418 aa8.76□□□□□ -1.01
NR1I3-231ENST00000512340 JAG1P78504 1218 aa8.76□□□□□ -1.01
NR1I3-231ENST00000512340 FGD1P98174 961 aa8.76□□□□□ -1.01
NR1I3-231ENST00000512340 TRAF1Q13077 416 aa8.76□□□□□ -1.01
NR1I3-231ENST00000512340 CCDC96Q2M329 555 aa8.76□□□□□ -1.01
NR1I3-231ENST00000512340 IFIT1BQ5T764 474 aaKnown RBP8.76□□□□□ -1.01
NR1I3-231ENST00000512340 FBXO46Q6PJ61 603 aaPredicted RBP8.76□□□□□ -1.01
NR1I3-231ENST00000512340 SAMD1Q6SPF0 538 aaPredicted RBP8.76□□□□□ -1.01
NR1I3-231ENST00000512340 LBX2Q6XYB7 198 aa8.76□□□□□ -1.01
NR1I3-231ENST00000512340 SYNE3Q6ZMZ3 975 aa8.76□□□□□ -1.01
NR1I3-231ENST00000512340 SPICE1Q8N0Z3 855 aa8.76□□□□□ -1.01
NR1I3-231ENST00000512340 RAET1EQ8TD07 263 aa8.76□□□□□ -1.01
NR1I3-231ENST00000512340 DCAF4Q8WV16 495 aa8.76□□□□□ -1.01
NR1I3-231ENST00000512340 GMCL1Q96IK5 515 aa8.76□□□□□ -1.01
NR1I3-231ENST00000512340 ZSCAN10Q96SZ4 725 aaPredicted RBP8.76□□□□□ -1.01
NR1I3-231ENST00000512340 P2RX7Q99572 595 aaKnown RBP8.76□□□□□ -1.01
NR1I3-231ENST00000512340 SLF1Q9BQI6 1058 aa8.76□□□□□ -1.01
NR1I3-231ENST00000512340 PAGR1Q9BTK6 254 aa8.76□□□□□ -1.01
NR1I3-231ENST00000512340 MORF4L1Q9UBU8 362 aa8.76□□□□□ -1.01
NR1I3-231ENST00000512340 PHIPQ8WWQ0 1821 aa8.75□□□□□ -1.01
NR1I3-231ENST00000512340 B4E1Z4 1266 aa8.75□□□□□ -1.01
NR1I3-231ENST00000512340 IFIT3O14879 490 aaKnown RBP8.75□□□□□ -1.01
NR1I3-231ENST00000512340 NDUFB10O96000 172 aa8.75□□□□□ -1.01
NR1I3-231ENST00000512340 CYP21A2P08686 494 aa8.75□□□□□ -1.01
NR1I3-231ENST00000512340 BCRP11274 1271 aa8.75□□□□□ -1.01
NR1I3-231ENST00000512340 PSMA5P28066 241 aa8.75□□□□□ -1.01
NR1I3-231ENST00000512340 DSG3P32926 999 aa8.75□□□□□ -1.01
NR1I3-231ENST00000512340 STAT2P52630 851 aa8.75□□□□□ -1.01
NR1I3-231ENST00000512340 ERVK-9P63128 1117 aa8.75□□□□□ -1.01
NR1I3-231ENST00000512340 ERVK-24P63145 666 aa8.75□□□□□ -1.01
NR1I3-231ENST00000512340 PTH1RQ03431 593 aa8.75□□□□□ -1.01
NR1I3-231ENST00000512340 EVX2Q03828 476 aa8.75□□□□□ -1.01
NR1I3-231ENST00000512340 PLS1Q14651 629 aa8.75□□□□□ -1.01
NR1I3-231ENST00000512340 WTAPQ15007 396 aa8.75□□□□□ -1.01
NR1I3-231ENST00000512340 SHROOM1Q2M3G4 852 aaPredicted RBP8.75□□□□□ -1.01
NR1I3-231ENST00000512340 FAM83BQ5T0W9 1011 aa8.75□□□□□ -1.01
NR1I3-231ENST00000512340 GPATCH4Q5T3I0 446 aaKnown RBP8.75□□□□□ -1.01
NR1I3-231ENST00000512340 WDR78Q5VTH9 848 aa8.75□□□□□ -1.01
NR1I3-231ENST00000512340 TBC1D10CQ8IV04 446 aa8.75□□□□□ -1.01
NR1I3-231ENST00000512340 TRMT44Q8IYL2 757 aaKnown RBP8.75□□□□□ -1.01
NR1I3-231ENST00000512340 LRRC47Q8N1G4 583 aaKnown RBP8.75□□□□□ -1.01
NR1I3-231ENST00000512340 CD99L2Q8TCZ2 262 aa8.75□□□□□ -1.01
NR1I3-231ENST00000512340 SOCS4Q8WXH5 440 aa8.75□□□□□ -1.01
NR1I3-231ENST00000512340 LSG1Q9H089 658 aaKnown RBP8.75□□□□□ -1.01
NR1I3-231ENST00000512340 HPS5Q9UPZ3 1129 aa8.75□□□□□ -1.01
NR1I3-231ENST00000512340 PTPRFP10586 1907 aa8.75□□□□□ -1.01
NR1I3-231ENST00000512340 LOC285556D6RIA3 1793 aa8.74□□□□□ -1.01
NR1I3-231ENST00000512340 E7EWF7 191 aa8.74□□□□□ -1.01
NR1I3-231ENST00000512340 TULP1O00294 542 aaPredicted RBP8.74□□□□□ -1.01
NR1I3-231ENST00000512340 STRNO43815 780 aa8.74□□□□□ -1.01
NR1I3-231ENST00000512340 PLA2G6O60733 806 aa8.74□□□□□ -1.01
NR1I3-231ENST00000512340 CALM1P0DP23 149 aa8.74□□□□□ -1.01
NR1I3-231ENST00000512340 CALM2P0DP24 149 aa8.74□□□□□ -1.01
NR1I3-231ENST00000512340 CALM3P0DP25 149 aa8.74□□□□□ -1.01
NR1I3-231ENST00000512340 CREB3L3Q68CJ9 461 aa8.74□□□□□ -1.01
NR1I3-231ENST00000512340 NFXL1Q6ZNB6 911 aa8.74□□□□□ -1.01
NR1I3-231ENST00000512340 OTOP1Q7RTM1 612 aa8.74□□□□□ -1.01
NR1I3-231ENST00000512340 CATIPQ7Z7H3 387 aa8.74□□□□□ -1.01
NR1I3-231ENST00000512340 SIAH1Q8IUQ4 282 aa8.74□□□□□ -1.01
NR1I3-231ENST00000512340 SHCBP1Q8NEM2 672 aa8.74□□□□□ -1.01
NR1I3-231ENST00000512340 KIFC2Q96AC6 838 aa8.74□□□□□ -1.01
NR1I3-231ENST00000512340 TMEM87BQ96K49 555 aa8.74□□□□□ -1.01
NR1I3-231ENST00000512340 TRIM47Q96LD4 638 aa8.74□□□□□ -1.01
NR1I3-231ENST00000512340 NUDT12Q9BQG2 462 aa8.74□□□□□ -1.01
NR1I3-231ENST00000512340 TMEM47Q9BQJ4 181 aa8.74□□□□□ -1.01
NR1I3-231ENST00000512340 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.74□□□□□ -1.01
NR1I3-231ENST00000512340 MROH8Q9H579 483 aa8.74□□□□□ -1.01
NR1I3-231ENST00000512340 UPF2Q9HAU5 1272 aaKnown RBP8.74□□□□□ -1.01
NR1I3-231ENST00000512340 ZSWIM5Q9P217 1185 aa8.74□□□□□ -1.01
NR1I3-231ENST00000512340 BIN2Q9UBW5 565 aaPredicted RBP8.74□□□□□ -1.01
NR1I3-231ENST00000512340 SRRDQ9UH36 339 aa8.74□□□□□ -1.01
NR1I3-231ENST00000512340 FBXO40Q9UH90 709 aa8.74□□□□□ -1.01
NR1I3-231ENST00000512340 PPP1R9AQ9ULJ8 1098 aa8.74□□□□□ -1.01
NR1I3-231ENST00000512340 MTMR7Q9Y216 660 aa8.74□□□□□ -1.01
NR1I3-231ENST00000512340 TNKSO95271 1327 aa8.74□□□□□ -1.01
NR1I3-231ENST00000512340 CCDC69A6NI79 296 aa8.73□□□□□ -1.01
NR1I3-231ENST00000512340 SPDYE16A6NNV3 312 aaPredicted RBP8.73□□□□□ -1.01
NR1I3-231ENST00000512340 TMEM232C9JQI7 657 aa8.73□□□□□ -1.01
NR1I3-231ENST00000512340 SMIM22K7EJ46 135 aa8.73□□□□□ -1.01
NR1I3-231ENST00000512340 SLC27A2O14975 620 aa8.73□□□□□ -1.01
NR1I3-231ENST00000512340 DHX16O60231 1041 aaKnown RBP8.73□□□□□ -1.01
NR1I3-231ENST00000512340 PARP1P09874 1014 aaKnown RBP8.73□□□□□ -1.01
NR1I3-231ENST00000512340 CAPN2P17655 700 aa8.73□□□□□ -1.01
NR1I3-231ENST00000512340 KIF5BP33176 963 aa8.73□□□□□ -1.01
NR1I3-231ENST00000512340 STAT3P40763 770 aa8.73□□□□□ -1.01
NR1I3-231ENST00000512340 GNAQP50148 359 aa8.73□□□□□ -1.01
NR1I3-231ENST00000512340 OAZ1P54368 228 aa8.73□□□□□ -1.01
NR1I3-231ENST00000512340 UBXN2AP68543 259 aa8.73□□□□□ -1.01
NR1I3-231ENST00000512340 TKFCQ3LXA3 575 aa8.73□□□□□ -1.01
NR1I3-231ENST00000512340 SLC9C1Q4G0N8 1177 aa8.73□□□□□ -1.01
NR1I3-231ENST00000512340 ASPRV1Q53RT3 343 aa8.73□□□□□ -1.01
NR1I3-231ENST00000512340 TMEM67Q5HYA8 995 aa8.73□□□□□ -1.01
NR1I3-231ENST00000512340 PLEKHH3Q7Z736 793 aa8.73□□□□□ -1.01
NR1I3-231ENST00000512340 CLEC10AQ8IUN9 316 aa8.73□□□□□ -1.01
NR1I3-231ENST00000512340 SLAIN1Q8ND83 568 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms