RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 TROAPQ12815 778 aa10.59□□□□□ -0.71
NR1I3-228ENST00000511676 PPIL2Q13356 520 aa10.59□□□□□ -0.71
NR1I3-228ENST00000511676 NECAB1Q8N987 351 aa10.59□□□□□ -0.71
NR1I3-228ENST00000511676 SPOCK2Q92563 424 aa10.59□□□□□ -0.71
NR1I3-228ENST00000511676 TNPO1Q92973 898 aaKnown RBP10.59□□□□□ -0.71
NR1I3-228ENST00000511676 TRIM47Q96LD4 638 aa10.59□□□□□ -0.71
NR1I3-228ENST00000511676 ELP3Q9H9T3 547 aa10.59□□□□□ -0.71
NR1I3-228ENST00000511676 NR2E3Q9Y5X4 410 aa10.59□□□□□ -0.71
NR1I3-228ENST00000511676 IGKV6D-41A0A0C4DH26 115 aa10.58□□□□□ -0.72
NR1I3-228ENST00000511676 SPDYE5A6NIY4 337 aa10.58□□□□□ -0.72
NR1I3-228ENST00000511676 TBC1D12O60347 775 aa10.58□□□□□ -0.72
NR1I3-228ENST00000511676 CTDNEP1O95476 244 aa10.58□□□□□ -0.72
NR1I3-228ENST00000511676 SMARCA1P28370 1054 aa10.58□□□□□ -0.72
NR1I3-228ENST00000511676 GNAQP50148 359 aa10.58□□□□□ -0.72
NR1I3-228ENST00000511676 NFIAQ12857 509 aa10.58□□□□□ -0.72
NR1I3-228ENST00000511676 STK3Q13188 491 aa10.58□□□□□ -0.72
NR1I3-228ENST00000511676 PICALMQ13492 652 aa10.58□□□□□ -0.72
NR1I3-228ENST00000511676 RTN1Q16799 776 aa10.58□□□□□ -0.72
NR1I3-228ENST00000511676 LARP1BQ659C4 914 aaKnown RBP10.58□□□□□ -0.72
NR1I3-228ENST00000511676 ATL3Q6DD88 541 aa10.58□□□□□ -0.72
NR1I3-228ENST00000511676 RCSD1Q6JBY9 416 aa10.58□□□□□ -0.72
NR1I3-228ENST00000511676 TATDN1Q6P1N9 297 aa10.58□□□□□ -0.72
NR1I3-228ENST00000511676 TRIM22Q8IYM9 498 aa10.58□□□□□ -0.72
NR1I3-228ENST00000511676 FAM184AQ8NB25 1140 aa10.58□□□□□ -0.72
NR1I3-228ENST00000511676 FANCBQ8NB91 859 aa10.58□□□□□ -0.72
NR1I3-228ENST00000511676 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.58□□□□□ -0.72
NR1I3-228ENST00000511676 CD99L2Q8TCZ2 262 aa10.58□□□□□ -0.72
NR1I3-228ENST00000511676 LZTS2Q9BRK4 669 aa10.58□□□□□ -0.72
NR1I3-228ENST00000511676 RNF26Q9BY78 433 aaPredicted RBP10.58□□□□□ -0.72
NR1I3-228ENST00000511676 ZSCAN16Q9H4T2 348 aaPredicted RBP10.58□□□□□ -0.72
NR1I3-228ENST00000511676 TDRD3Q9H7E2 651 aaKnown RBP10.58□□□□□ -0.72
NR1I3-228ENST00000511676 KAT14Q9H8E8 782 aa10.58□□□□□ -0.72
NR1I3-228ENST00000511676 GINM1Q9NU53 330 aa10.58□□□□□ -0.72
NR1I3-228ENST00000511676 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.58□□□□□ -0.72
NR1I3-228ENST00000511676 SAP30BPQ9UHR5 308 aaKnown RBP10.58□□□□□ -0.72
NR1I3-228ENST00000511676 GREB1LQ9C091 1923 aaPredicted RBP10.57□□□□□ -0.72
NR1I3-228ENST00000511676 TCP10L2B9ZVM9 353 aa10.57□□□□□ -0.72
NR1I3-228ENST00000511676 IGF2BP3O00425 579 aaKnown RBP eCLIP10.57□□□□□ -0.72
NR1I3-228ENST00000511676 CXCL11O14625 94 aa10.57□□□□□ -0.72
NR1I3-228ENST00000511676 PRDM1O75626 825 aa10.57□□□□□ -0.72
NR1I3-228ENST00000511676 TOP1P11387 765 aaKnown RBP10.57□□□□□ -0.72
NR1I3-228ENST00000511676 MAP3K10Q02779 954 aa10.57□□□□□ -0.72
NR1I3-228ENST00000511676 NTRK3Q16288 839 aa10.57□□□□□ -0.72
NR1I3-228ENST00000511676 MICU3Q86XE3 530 aa10.57□□□□□ -0.72
NR1I3-228ENST00000511676 CTCFLQ8NI51 663 aaPredicted RBP10.57□□□□□ -0.72
NR1I3-228ENST00000511676 RAET1EQ8TD07 263 aa10.57□□□□□ -0.72
NR1I3-228ENST00000511676 DYNLL2Q96FJ2 89 aa10.57□□□□□ -0.72
NR1I3-228ENST00000511676 MS4A4AQ96JQ5 239 aa10.57□□□□□ -0.72
NR1I3-228ENST00000511676 WRNIP1Q96S55 665 aa10.57□□□□□ -0.72
NR1I3-228ENST00000511676 PARK7Q99497 189 aaKnown RBP10.57□□□□□ -0.72
NR1I3-228ENST00000511676 LARP6Q9BRS8 491 aaKnown RBP10.57□□□□□ -0.72
NR1I3-228ENST00000511676 TRIM34Q9BYJ4 488 aa10.57□□□□□ -0.72
NR1I3-228ENST00000511676 INCENPQ9NQS7 918 aa10.57□□□□□ -0.72
NR1I3-228ENST00000511676 GPHNQ9NQX3 736 aaPredicted RBP10.57□□□□□ -0.72
NR1I3-228ENST00000511676 MTMR6Q9Y217 621 aa10.57□□□□□ -0.72
NR1I3-228ENST00000511676 ZDHHC9Q9Y397 364 aa10.57□□□□□ -0.72
NR1I3-228ENST00000511676 DEXIO95424 95 aa10.56□□□□□ -0.72
NR1I3-228ENST00000511676 FMNL1O95466 1100 aaPredicted RBP10.56□□□□□ -0.72
NR1I3-228ENST00000511676 F13A1P00488 732 aa10.56□□□□□ -0.72
NR1I3-228ENST00000511676 MCM4P33991 863 aa10.56□□□□□ -0.72
NR1I3-228ENST00000511676 SHMT1P34896 483 aa10.56□□□□□ -0.72
NR1I3-228ENST00000511676 LACTBP83111 547 aaPredicted RBP10.56□□□□□ -0.72
NR1I3-228ENST00000511676 PABPC4Q13310 644 aaKnown RBP eCLIP10.56□□□□□ -0.72
NR1I3-228ENST00000511676 VGLL4Q14135 290 aa10.56□□□□□ -0.72
NR1I3-228ENST00000511676 NFKBIBQ15653 356 aa10.56□□□□□ -0.72
NR1I3-228ENST00000511676 CSPP1Q1MSJ5 1256 aa10.56□□□□□ -0.72
NR1I3-228ENST00000511676 HABP4Q5JVS0 413 aaKnown RBP10.56□□□□□ -0.72
NR1I3-228ENST00000511676 TMEM179Q6ZVK1 233 aa10.56□□□□□ -0.72
NR1I3-228ENST00000511676 ANKRD23Q86SG2 305 aa10.56□□□□□ -0.72
NR1I3-228ENST00000511676 CRACR2BQ8N4Y2 399 aaPredicted RBP10.56□□□□□ -0.72
NR1I3-228ENST00000511676 PNMA1Q8ND90 353 aa10.56□□□□□ -0.72
NR1I3-228ENST00000511676 OTUD5Q96G74 571 aa10.56□□□□□ -0.72
NR1I3-228ENST00000511676 ZNF333Q96JL9 665 aa10.56□□□□□ -0.72
NR1I3-228ENST00000511676 CLMNQ96JQ2 1002 aa10.56□□□□□ -0.72
NR1I3-228ENST00000511676 NCOA5Q9HCD5 579 aaKnown RBP10.56□□□□□ -0.72
NR1I3-228ENST00000511676 PICK1Q9NRD5 415 aa10.56□□□□□ -0.72
NR1I3-228ENST00000511676 IL17RBQ9NRM6 502 aa10.56□□□□□ -0.72
NR1I3-228ENST00000511676 FAM217BQ9NTX9 383 aaPredicted RBP10.56□□□□□ -0.72
NR1I3-228ENST00000511676 MTMR4Q9NYA4 1195 aa10.56□□□□□ -0.72
NR1I3-228ENST00000511676 NAP1L2Q9ULW6 460 aaPredicted RBP10.56□□□□□ -0.72
NR1I3-228ENST00000511676 SCAF8Q9UPN6 1271 aaKnown RBP10.56□□□□□ -0.72
NR1I3-228ENST00000511676 SLC45A1Q9Y2W3 748 aa10.56□□□□□ -0.72
NR1I3-228ENST00000511676 SMIM22K7EJ46 135 aa10.55□□□□□ -0.72
NR1I3-228ENST00000511676 PITPNM1O00562 1244 aa10.55□□□□□ -0.72
NR1I3-228ENST00000511676 JAK2O60674 1132 aa10.55□□□□□ -0.72
NR1I3-228ENST00000511676 TTLL1O95922 423 aa10.55□□□□□ -0.72
NR1I3-228ENST00000511676 CDC27P30260 824 aa10.55□□□□□ -0.72
NR1I3-228ENST00000511676 FCGRTP55899 365 aa10.55□□□□□ -0.72
NR1I3-228ENST00000511676 CCT2P78371 535 aaKnown RBP10.55□□□□□ -0.72
NR1I3-228ENST00000511676 SSRP1Q08945 709 aaKnown RBP10.55□□□□□ -0.72
NR1I3-228ENST00000511676 FAM47AQ5JRC9 791 aa10.55□□□□□ -0.72
NR1I3-228ENST00000511676 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.55□□□□□ -0.72
NR1I3-228ENST00000511676 SH3BP5LQ7L8J4 393 aa10.55□□□□□ -0.72
NR1I3-228ENST00000511676 ZSCAN29Q8IWY8 852 aaPredicted RBP10.55□□□□□ -0.72
NR1I3-228ENST00000511676 ZKSCAN3Q9BRR0 538 aa10.55□□□□□ -0.72
NR1I3-228ENST00000511676 KANSL2Q9H9L4 492 aa10.55□□□□□ -0.72
NR1I3-228ENST00000511676 NYAP2Q9P242 653 aa10.55□□□□□ -0.72
NR1I3-228ENST00000511676 ORC3Q9UBD5 711 aaPredicted RBP10.55□□□□□ -0.72
NR1I3-228ENST00000511676 BIN2Q9UBW5 565 aaPredicted RBP10.55□□□□□ -0.72
NR1I3-228ENST00000511676 PNMA3Q9UL41 463 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms