RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 DGKHQ86XP1 1220 aa8.42□□□□□ -1.06
PDLIM5-215ENST00000511586 CCAR1Q8IX12 1150 aaKnown RBP8.42□□□□□ -1.06
PDLIM5-215ENST00000511586 COA7Q96BR5 231 aa8.42□□□□□ -1.06
PDLIM5-215ENST00000511586 GMCL1Q96IK5 515 aa8.42□□□□□ -1.06
PDLIM5-215ENST00000511586 NUP88Q99567 741 aaPredicted RBP8.42□□□□□ -1.06
PDLIM5-215ENST00000511586 TMEM47Q9BQJ4 181 aa8.42□□□□□ -1.06
PDLIM5-215ENST00000511586 ZKSCAN3Q9BRR0 538 aa8.42□□□□□ -1.06
PDLIM5-215ENST00000511586 SRRDQ9UH36 339 aa8.42□□□□□ -1.06
PDLIM5-215ENST00000511586 FEM1BQ9UK73 627 aa8.42□□□□□ -1.06
PDLIM5-215ENST00000511586 PTPN22Q9Y2R2 807 aa8.42□□□□□ -1.06
PDLIM5-215ENST00000511586 GREB1LQ9C091 1923 aaPredicted RBP8.42□□□□□ -1.06
PDLIM5-215ENST00000511586 E7EWF7 191 aa8.41□□□□□ -1.06
PDLIM5-215ENST00000511586 PEX10O60683 326 aa8.41□□□□□ -1.06
PDLIM5-215ENST00000511586 CNMDO75829 334 aa8.41□□□□□ -1.06
PDLIM5-215ENST00000511586 MCCP23508 829 aa8.41□□□□□ -1.06
PDLIM5-215ENST00000511586 MAPK4P31152 587 aa8.41□□□□□ -1.06
PDLIM5-215ENST00000511586 NECTIN1Q15223 517 aa8.41□□□□□ -1.06
PDLIM5-215ENST00000511586 RNF20Q5VTR2 975 aa8.41□□□□□ -1.06
PDLIM5-215ENST00000511586 RCSD1Q6JBY9 416 aa8.41□□□□□ -1.06
PDLIM5-215ENST00000511586 PRPF38AQ8NAV1 312 aaKnown RBP8.41□□□□□ -1.06
PDLIM5-215ENST00000511586 NCOA7Q8NI08 942 aa8.41□□□□□ -1.06
PDLIM5-215ENST00000511586 NKX2-3Q8TAU0 364 aa8.41□□□□□ -1.06
PDLIM5-215ENST00000511586 CHURC1Q8WUH1 139 aa8.41□□□□□ -1.06
PDLIM5-215ENST00000511586 ANKS1AQ92625 1134 aa8.41□□□□□ -1.06
PDLIM5-215ENST00000511586 ATG4CQ96DT6 458 aa8.41□□□□□ -1.06
PDLIM5-215ENST00000511586 ABHD8Q96I13 439 aa8.41□□□□□ -1.06
PDLIM5-215ENST00000511586 ZSCAN10Q96SZ4 725 aaPredicted RBP8.41□□□□□ -1.06
PDLIM5-215ENST00000511586 SLF1Q9BQI6 1058 aa8.41□□□□□ -1.06
PDLIM5-215ENST00000511586 UBAC1Q9BSL1 405 aa8.41□□□□□ -1.06
PDLIM5-215ENST00000511586 FBXO28Q9NVF7 368 aa8.41□□□□□ -1.06
PDLIM5-215ENST00000511586 BTBD7Q9P203 1132 aa8.41□□□□□ -1.06
PDLIM5-215ENST00000511586 PPP1R9AQ9ULJ8 1098 aa8.41□□□□□ -1.06
PDLIM5-215ENST00000511586 ISY1Q9ULR0 285 aaKnown RBP8.41□□□□□ -1.06
PDLIM5-215ENST00000511586 ADAMTS5Q9UNA0 930 aa8.41□□□□□ -1.06
PDLIM5-215ENST00000511586 TNKSO95271 1327 aa8.4□□□□□ -1.06
PDLIM5-215ENST00000511586 VWA5AO00534 786 aa8.4□□□□□ -1.06
PDLIM5-215ENST00000511586 SLC27A2O14975 620 aa8.4□□□□□ -1.06
PDLIM5-215ENST00000511586 REC8O95072 547 aa8.4□□□□□ -1.06
PDLIM5-215ENST00000511586 STAT2P52630 851 aa8.4□□□□□ -1.06
PDLIM5-215ENST00000511586 IKQ13123 557 aaPredicted RBP8.4□□□□□ -1.06
PDLIM5-215ENST00000511586 PLS1Q14651 629 aa8.4□□□□□ -1.06
PDLIM5-215ENST00000511586 CREB3L3Q68CJ9 461 aa8.4□□□□□ -1.06
PDLIM5-215ENST00000511586 STOX1Q6ZVD7 989 aa8.4□□□□□ -1.06
PDLIM5-215ENST00000511586 CYB5R4Q7L1T6 521 aa8.4□□□□□ -1.06
PDLIM5-215ENST00000511586 FAM160B2Q86V87 743 aa8.4□□□□□ -1.06
PDLIM5-215ENST00000511586 ENAHQ8N8S7 591 aaPredicted RBP8.4□□□□□ -1.06
PDLIM5-215ENST00000511586 RAET1EQ8TD07 263 aa8.4□□□□□ -1.06
PDLIM5-215ENST00000511586 DCAF4Q8WV16 495 aa8.4□□□□□ -1.06
PDLIM5-215ENST00000511586 KIFC2Q96AC6 838 aa8.4□□□□□ -1.06
PDLIM5-215ENST00000511586 SPATC1LQ9H0A9 340 aa8.4□□□□□ -1.06
PDLIM5-215ENST00000511586 PORCNQ9H237 461 aa8.4□□□□□ -1.06
PDLIM5-215ENST00000511586 KAT14Q9H8E8 782 aa8.4□□□□□ -1.06
PDLIM5-215ENST00000511586 CWC22Q9HCG8 908 aaKnown RBP8.4□□□□□ -1.06
PDLIM5-215ENST00000511586 GABRQQ9UN88 632 aa8.4□□□□□ -1.06
PDLIM5-215ENST00000511586 HPS5Q9UPZ3 1129 aa8.4□□□□□ -1.06
PDLIM5-215ENST00000511586 MTMR7Q9Y216 660 aa8.4□□□□□ -1.06
PDLIM5-215ENST00000511586 CTDP1Q9Y5B0 961 aaPredicted RBP8.4□□□□□ -1.06
PDLIM5-215ENST00000511586 PTCH2Q9Y6C5 1203 aa8.4□□□□□ -1.06
PDLIM5-215ENST00000511586 TAF6LQ9Y6J9 622 aa8.4□□□□□ -1.06
PDLIM5-215ENST00000511586 LAMA4Q16363 1823 aa8.39□□□□□ -1.07
PDLIM5-215ENST00000511586 ERICH2A1L162 156 aa8.39□□□□□ -1.07
PDLIM5-215ENST00000511586 TMEM232C9JQI7 657 aa8.39□□□□□ -1.07
PDLIM5-215ENST00000511586 IFIT3O14879 490 aaKnown RBP8.39□□□□□ -1.07
PDLIM5-215ENST00000511586 PLA2G6O60733 806 aa8.39□□□□□ -1.07
PDLIM5-215ENST00000511586 ZBED4O75132 1171 aa8.39□□□□□ -1.07
PDLIM5-215ENST00000511586 SLC25A27O95847 323 aa8.39□□□□□ -1.07
PDLIM5-215ENST00000511586 FDX1P10109 184 aa8.39□□□□□ -1.07
PDLIM5-215ENST00000511586 PDHBP11177 359 aa8.39□□□□□ -1.07
PDLIM5-215ENST00000511586 ZKSCAN1P17029 563 aaPredicted RBP8.39□□□□□ -1.07
PDLIM5-215ENST00000511586 FLT3LGP49771 235 aa8.39□□□□□ -1.07
PDLIM5-215ENST00000511586 PRKCZQ05513 592 aa8.39□□□□□ -1.07
PDLIM5-215ENST00000511586 IRF5Q13568 498 aa8.39□□□□□ -1.07
PDLIM5-215ENST00000511586 TMEM132BQ14DG7 1078 aa8.39□□□□□ -1.07
PDLIM5-215ENST00000511586 SART3Q15020 963 aaKnown RBP8.39□□□□□ -1.07
PDLIM5-215ENST00000511586 CCDC96Q2M329 555 aa8.39□□□□□ -1.07
PDLIM5-215ENST00000511586 SLC9C1Q4G0N8 1177 aa8.39□□□□□ -1.07
PDLIM5-215ENST00000511586 IFIT1BQ5T764 474 aaKnown RBP8.39□□□□□ -1.07
PDLIM5-215ENST00000511586 WDR78Q5VTH9 848 aa8.39□□□□□ -1.07
PDLIM5-215ENST00000511586 KCTD1Q719H9 257 aa8.39□□□□□ -1.07
PDLIM5-215ENST00000511586 GPR142Q7Z601 462 aa8.39□□□□□ -1.07
PDLIM5-215ENST00000511586 PLEKHH3Q7Z736 793 aa8.39□□□□□ -1.07
PDLIM5-215ENST00000511586 NBPF11Q86T75 865 aa8.39□□□□□ -1.07
PDLIM5-215ENST00000511586 PNMA1Q8ND90 353 aa8.39□□□□□ -1.07
PDLIM5-215ENST00000511586 SHCBP1Q8NEM2 672 aa8.39□□□□□ -1.07
PDLIM5-215ENST00000511586 CHMP4CQ96CF2 233 aa8.39□□□□□ -1.07
PDLIM5-215ENST00000511586 MOV10L1Q9BXT6 1211 aaKnown RBP8.39□□□□□ -1.07
PDLIM5-215ENST00000511586 MROH8Q9H579 483 aa8.39□□□□□ -1.07
PDLIM5-215ENST00000511586 GJD2Q9UKL4 321 aa8.39□□□□□ -1.07
PDLIM5-215ENST00000511586 FRMPD2Q68DX3 1309 aaPredicted RBP8.38□□□□□ -1.07
PDLIM5-215ENST00000511586 CCDC85CA6NKD9 419 aa8.38□□□□□ -1.07
PDLIM5-215ENST00000511586 EPB41L2O43491 1005 aaKnown RBP8.38□□□□□ -1.07
PDLIM5-215ENST00000511586 STRNO43815 780 aa8.38□□□□□ -1.07
PDLIM5-215ENST00000511586 ADCY3O60266 1144 aa8.38□□□□□ -1.07
PDLIM5-215ENST00000511586 SNHG28P0DPA3 235 aa8.38□□□□□ -1.07
PDLIM5-215ENST00000511586 ERCC3P19447 782 aa8.38□□□□□ -1.07
PDLIM5-215ENST00000511586 MCM5P33992 734 aa8.38□□□□□ -1.07
PDLIM5-215ENST00000511586 COPB2P35606 906 aa8.38□□□□□ -1.07
PDLIM5-215ENST00000511586 STAT3P40763 770 aa8.38□□□□□ -1.07
PDLIM5-215ENST00000511586 KRT32Q14532 448 aa8.38□□□□□ -1.07
PDLIM5-215ENST00000511586 SEC23AQ15436 765 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms