RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 SMAPO00193 183 aa5.48□□□□□ -1.53
PTPN13-209ENST00000511467 MAFGO15525 162 aa5.48□□□□□ -1.53
PTPN13-209ENST00000511467 LPXNO60711 386 aa5.48□□□□□ -1.53
PTPN13-209ENST00000511467 ATRNO75882 1429 aa5.48□□□□□ -1.53
PTPN13-209ENST00000511467 NOP14P78316 857 aaKnown RBP5.48□□□□□ -1.53
PTPN13-209ENST00000511467 MAP3K9P80192 1104 aa5.48□□□□□ -1.53
PTPN13-209ENST00000511467 HDLBPQ00341 1268 aaKnown RBP5.48□□□□□ -1.53
PTPN13-209ENST00000511467 DDX60LQ5H9U9 1706 aaKnown RBP5.48□□□□□ -1.53
PTPN13-209ENST00000511467 ACBD5Q5T8D3 534 aaPredicted RBP5.48□□□□□ -1.53
PTPN13-209ENST00000511467 ZNF449Q6P9G9 518 aa5.48□□□□□ -1.53
PTPN13-209ENST00000511467 ENOSF1Q7L5Y1 443 aa5.48□□□□□ -1.53
PTPN13-209ENST00000511467 REM2Q8IYK8 340 aaPredicted RBP5.48□□□□□ -1.53
PTPN13-209ENST00000511467 LEO1Q8WVC0 666 aaPredicted RBP5.48□□□□□ -1.53
PTPN13-209ENST00000511467 CSADQ9Y600 493 aa5.48□□□□□ -1.53
PTPN13-209ENST00000511467 TTC3P53804 2025 aa5.47□□□□□ -1.53
PTPN13-209ENST00000511467 MAP3K15Q6ZN16 1313 aa5.47□□□□□ -1.53
PTPN13-209ENST00000511467 LOC102724159A0A0B4J2E5 919 aa5.47□□□□□ -1.53
PTPN13-209ENST00000511467 EEF1GP26641 437 aaKnown RBP5.47□□□□□ -1.53
PTPN13-209ENST00000511467 IL13P35225 146 aa5.47□□□□□ -1.53
PTPN13-209ENST00000511467 TFDP1Q14186 410 aa5.47□□□□□ -1.53
PTPN13-209ENST00000511467 PWP2Q15269 919 aaKnown RBP5.47□□□□□ -1.53
PTPN13-209ENST00000511467 SLC9C1Q4G0N8 1177 aa5.47□□□□□ -1.53
PTPN13-209ENST00000511467 MPRIPQ6WCQ1 1025 aa5.47□□□□□ -1.53
PTPN13-209ENST00000511467 MIGA2Q7L4E1 593 aa5.47□□□□□ -1.53
PTPN13-209ENST00000511467 NBPF11Q86T75 865 aa5.47□□□□□ -1.53
PTPN13-209ENST00000511467 TACO1Q9BSH4 297 aaKnown RBP5.47□□□□□ -1.53
PTPN13-209ENST00000511467 MRPL40Q9NQ50 206 aaKnown RBP5.47□□□□□ -1.53
PTPN13-209ENST00000511467 KNTC1P50748 2209 aa5.47□□□□□ -1.53
PTPN13-209ENST00000511467 DISP2A7MBM2 1401 aa5.47□□□□□ -1.53
PTPN13-209ENST00000511467 A0A1W2PQ27 194 aa5.47□□□□□ -1.53
PTPN13-209ENST00000511467 A0A1W2PQ64 194 aa5.47□□□□□ -1.53
PTPN13-209ENST00000511467 A0A1W2PQD8 194 aa5.47□□□□□ -1.53
PTPN13-209ENST00000511467 PRR29P0C7W0 189 aa5.47□□□□□ -1.53
PTPN13-209ENST00000511467 DRP2Q13474 957 aa5.47□□□□□ -1.53
PTPN13-209ENST00000511467 SPECC1Q5M775 1068 aa5.47□□□□□ -1.53
PTPN13-209ENST00000511467 ATP6V0A1Q93050 837 aa5.47□□□□□ -1.53
PTPN13-209ENST00000511467 TSPAN18Q96SJ8 248 aa5.47□□□□□ -1.53
PTPN13-209ENST00000511467 MYCBPQ99417 103 aaPredicted RBP5.47□□□□□ -1.53
PTPN13-209ENST00000511467 SMARCAL1Q9NZC9 954 aa5.47□□□□□ -1.53
PTPN13-209ENST00000511467 HERC5Q9UII4 1024 aaKnown RBP5.47□□□□□ -1.53
PTPN13-209ENST00000511467 LAMB2P55268 1798 aa5.47□□□□□ -1.53
PTPN13-209ENST00000511467 TMEM94Q12767 1356 aa5.47□□□□□ -1.53
PTPN13-209ENST00000511467 SART1O43290 800 aaKnown RBP5.47□□□□□ -1.53
PTPN13-209ENST00000511467 RAD21O60216 631 aa5.47□□□□□ -1.53
PTPN13-209ENST00000511467 VAMP4O75379 141 aa5.47□□□□□ -1.53
PTPN13-209ENST00000511467 SDSP20132 328 aa5.47□□□□□ -1.53
PTPN13-209ENST00000511467 NOP2P46087 812 aaKnown RBP5.47□□□□□ -1.53
PTPN13-209ENST00000511467 NAPAP54920 295 aa5.47□□□□□ -1.53
PTPN13-209ENST00000511467 ATP2B2Q01814 1243 aa5.47□□□□□ -1.53
PTPN13-209ENST00000511467 RRS1Q15050 365 aaKnown RBP5.47□□□□□ -1.53
PTPN13-209ENST00000511467 UTP14CQ5TAP6 766 aaKnown RBP5.47□□□□□ -1.53
PTPN13-209ENST00000511467 IFT20Q8IY31 132 aa5.47□□□□□ -1.53
PTPN13-209ENST00000511467 ALG1Q9BT22 464 aa5.47□□□□□ -1.53
PTPN13-209ENST00000511467 INO80BQ9C086 356 aaPredicted RBP5.47□□□□□ -1.53
PTPN13-209ENST00000511467 PRDM16Q9HAZ2 1276 aa5.47□□□□□ -1.53
PTPN13-209ENST00000511467 ZNF215Q9UL58 517 aaPredicted RBP5.47□□□□□ -1.53
PTPN13-209ENST00000511467 ELL2O00472 640 aaPredicted RBP5.47□□□□□ -1.53
PTPN13-209ENST00000511467 CETN3O15182 167 aa5.47□□□□□ -1.53
PTPN13-209ENST00000511467 PER1O15534 1290 aaPredicted RBP5.47□□□□□ -1.53
PTPN13-209ENST00000511467 SKIP12755 728 aa5.47□□□□□ -1.53
PTPN13-209ENST00000511467 LMNB1P20700 586 aa5.47□□□□□ -1.53
PTPN13-209ENST00000511467 PTPREP23469 700 aa5.47□□□□□ -1.53
PTPN13-209ENST00000511467 LIFRP42702 1097 aa5.47□□□□□ -1.53
PTPN13-209ENST00000511467 TAP1Q03518 808 aa5.47□□□□□ -1.53
PTPN13-209ENST00000511467 NR1H3Q13133 447 aa5.47□□□□□ -1.53
PTPN13-209ENST00000511467 FSIP1Q8NA03 581 aa5.47□□□□□ -1.53
PTPN13-209ENST00000511467 ZNF579Q8NAF0 562 aaKnown RBP5.47□□□□□ -1.53
PTPN13-209ENST00000511467 HAUS7Q99871 368 aa5.47□□□□□ -1.53
PTPN13-209ENST00000511467 MAK16Q9BXY0 300 aaKnown RBP5.47□□□□□ -1.53
PTPN13-209ENST00000511467 FOXP3Q9BZS1 431 aa5.47□□□□□ -1.53
PTPN13-209ENST00000511467 OLFML3Q9NRN5 406 aa5.47□□□□□ -1.53
PTPN13-209ENST00000511467 NFU1Q9UMS0 254 aa5.47□□□□□ -1.53
PTPN13-209ENST00000511467 NIP7Q9Y221 180 aaKnown RBP eCLIP5.47□□□□□ -1.53
PTPN13-209ENST00000511467 LUC7L2Q9Y383 392 aaKnown RBP5.47□□□□□ -1.53
PTPN13-209ENST00000511467 GOLGA8IPA6NC78 632 aa5.47□□□□□ -1.53
PTPN13-209ENST00000511467 GIPC1O14908 333 aa5.47□□□□□ -1.53
PTPN13-209ENST00000511467 ARHGAP6O43182 974 aa5.47□□□□□ -1.53
PTPN13-209ENST00000511467 NPR1P16066 1061 aa5.47□□□□□ -1.53
PTPN13-209ENST00000511467 CTSWP56202 376 aa5.47□□□□□ -1.53
PTPN13-209ENST00000511467 EIF2B5Q13144 721 aaKnown RBP5.47□□□□□ -1.53
PTPN13-209ENST00000511467 BIRC2Q13490 618 aa5.47□□□□□ -1.53
PTPN13-209ENST00000511467 SLFN12LQ6IEE8 588 aa5.47□□□□□ -1.53
PTPN13-209ENST00000511467 TRIM58Q8NG06 486 aa5.47□□□□□ -1.53
PTPN13-209ENST00000511467 TMEM206Q9H813 350 aa5.47□□□□□ -1.53
PTPN13-209ENST00000511467 RIC8AQ9NPQ8 531 aa5.47□□□□□ -1.53
PTPN13-209ENST00000511467 MEGF6O75095 1541 aa5.47□□□□□ -1.53
PTPN13-209ENST00000511467 PLIN1O60240 522 aa5.47□□□□□ -1.53
PTPN13-209ENST00000511467 CA4P22748 312 aa5.47□□□□□ -1.53
PTPN13-209ENST00000511467 ERCC5P28715 1186 aaPredicted RBP5.47□□□□□ -1.53
PTPN13-209ENST00000511467 AP3B2Q13367 1082 aa5.47□□□□□ -1.53
PTPN13-209ENST00000511467 TRMT44Q8IYL2 757 aaKnown RBP5.47□□□□□ -1.53
PTPN13-209ENST00000511467 SSH3Q8TE77 659 aa5.47□□□□□ -1.53
PTPN13-209ENST00000511467 MMRN2Q9H8L6 949 aa5.47□□□□□ -1.53
PTPN13-209ENST00000511467 GPHNQ9NQX3 736 aaPredicted RBP5.47□□□□□ -1.53
PTPN13-209ENST00000511467 CIITAP33076 1130 aa5.46□□□□□ -1.53
PTPN13-209ENST00000511467 ARHGAP25P42331 645 aa5.46□□□□□ -1.53
PTPN13-209ENST00000511467 XPCQ01831 940 aaPredicted RBP5.46□□□□□ -1.53
PTPN13-209ENST00000511467 RAB3GAP1Q15042 981 aa5.46□□□□□ -1.53
PTPN13-209ENST00000511467 TRIM72Q6ZMU5 477 aa5.46□□□□□ -1.53
PTPN13-209ENST00000511467 BBS5Q8N3I7 341 aa5.46□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms