RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 RNF181Q9P0P0 153 aa17.51■□□□□ 0.39
SCLT1-209ENST00000511426 VPS54Q9P1Q0 977 aa17.51■□□□□ 0.39
SCLT1-209ENST00000511426 HACL1Q9UJ83 578 aa17.51■□□□□ 0.39
SCLT1-209ENST00000511426 ZBTB21Q9ULJ3 1066 aa17.51■□□□□ 0.39
SCLT1-209ENST00000511426 ESYT2A0FGR8 921 aa17.5■□□□□ 0.39
SCLT1-209ENST00000511426 USP17L5A8MUK1 530 aa17.5■□□□□ 0.39
SCLT1-209ENST00000511426 BMP15O95972 392 aa17.5■□□□□ 0.39
SCLT1-209ENST00000511426 LMOD1P29536 600 aaPredicted RBP17.5■□□□□ 0.39
SCLT1-209ENST00000511426 TRAPPC10P48553 1259 aa17.5■□□□□ 0.39
SCLT1-209ENST00000511426 TBC1D10BQ4KMP7 808 aaPredicted RBP17.5■□□□□ 0.39
SCLT1-209ENST00000511426 PPP1R18Q6NYC8 613 aa17.5■□□□□ 0.39
SCLT1-209ENST00000511426 SAMD7Q7Z3H4 446 aa17.5■□□□□ 0.39
SCLT1-209ENST00000511426 LINC00301Q8NCQ3 95 aa17.5■□□□□ 0.39
SCLT1-209ENST00000511426 TFIP11Q9UBB9 837 aaKnown RBP17.5■□□□□ 0.39
SCLT1-209ENST00000511426 TCHHQ07283 1943 aa17.49■□□□□ 0.39
SCLT1-209ENST00000511426 SHTN1A0MZ66 631 aa17.49■□□□□ 0.39
SCLT1-209ENST00000511426 BTBD18B2RXH4 712 aa17.49■□□□□ 0.39
SCLT1-209ENST00000511426 UBE2Q2LH0YL09 131 aa17.49■□□□□ 0.39
SCLT1-209ENST00000511426 GRIN3BO60391 1043 aa17.49■□□□□ 0.39
SCLT1-209ENST00000511426 LETM1O95202 739 aaPredicted RBP17.49■□□□□ 0.39
SCLT1-209ENST00000511426 YBX3P16989 372 aaKnown RBP eCLIP17.49■□□□□ 0.391e-6■■□□□ 12
SCLT1-209ENST00000511426 NLRP5P59047 1200 aa17.49■□□□□ 0.39
SCLT1-209ENST00000511426 ANO1Q5XXA6 986 aa17.49■□□□□ 0.39
SCLT1-209ENST00000511426 TEX2Q8IWB9 1127 aa17.49■□□□□ 0.39
SCLT1-209ENST00000511426 DEFB129Q9H1M3 183 aa17.49■□□□□ 0.39
SCLT1-209ENST00000511426 ADARB2Q9NS39 739 aaKnown RBP17.49■□□□□ 0.39
SCLT1-209ENST00000511426 NOL7Q9UMY1 257 aaKnown RBP17.49■□□□□ 0.39
SCLT1-209ENST00000511426 KCNJ14Q9UNX9 436 aa17.49■□□□□ 0.39
SCLT1-209ENST00000511426 CEP131Q9UPN4 1083 aa17.49■□□□□ 0.39
SCLT1-209ENST00000511426 TMX2Q9Y320 296 aa17.49■□□□□ 0.39
SCLT1-209ENST00000511426 PPP6R2O75170 966 aa17.48■□□□□ 0.39
SCLT1-209ENST00000511426 GADD45BO75293 160 aaPredicted RBP17.48■□□□□ 0.39
SCLT1-209ENST00000511426 GDF11O95390 407 aa17.48■□□□□ 0.39
SCLT1-209ENST00000511426 EGFRP00533 1210 aa17.48■□□□□ 0.39
SCLT1-209ENST00000511426 GNA11P29992 359 aa17.48■□□□□ 0.39
SCLT1-209ENST00000511426 SLC1A4P43007 532 aa17.48■□□□□ 0.39
SCLT1-209ENST00000511426 ATP2B2Q01814 1243 aa17.48■□□□□ 0.39
SCLT1-209ENST00000511426 SLFN13Q68D06 897 aa17.48■□□□□ 0.39
SCLT1-209ENST00000511426 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.48■□□□□ 0.39
SCLT1-209ENST00000511426 MYH4Q9Y623 1939 aa17.48■□□□□ 0.39
SCLT1-209ENST00000511426 SLC39A14Q15043 492 aa17.48■□□□□ 0.39
SCLT1-209ENST00000511426 STK38Q15208 465 aa17.48■□□□□ 0.39
SCLT1-209ENST00000511426 DPY19L2Q6NUT2 758 aa17.48■□□□□ 0.39
SCLT1-209ENST00000511426 CAVIN1Q6NZI2 390 aaKnown RBP17.48■□□□□ 0.39
SCLT1-209ENST00000511426 SIAH1Q8IUQ4 282 aa17.48■□□□□ 0.39
SCLT1-209ENST00000511426 MTMR8Q96EF0 704 aa17.48■□□□□ 0.39
SCLT1-209ENST00000511426 GOPCQ9HD26 462 aa17.48■□□□□ 0.39
SCLT1-209ENST00000511426 PCDHA4Q9UN74 947 aa17.48■□□□□ 0.39
SCLT1-209ENST00000511426 A0A1W2PQ27 194 aa17.47■□□□□ 0.39
SCLT1-209ENST00000511426 A0A1W2PQ64 194 aa17.47■□□□□ 0.39
SCLT1-209ENST00000511426 A0A1W2PQD8 194 aa17.47■□□□□ 0.39
SCLT1-209ENST00000511426 F5H6K3 240 aa17.47■□□□□ 0.39
SCLT1-209ENST00000511426 CTNND1O60716 968 aaKnown RBP17.47■□□□□ 0.39
SCLT1-209ENST00000511426 GOLGA8HP0CJ92 632 aa17.47■□□□□ 0.39
SCLT1-209ENST00000511426 ZNF445P59923 1031 aa17.47■□□□□ 0.39
SCLT1-209ENST00000511426 KLRC3Q07444 240 aa17.47■□□□□ 0.39
SCLT1-209ENST00000511426 TRAF1Q13077 416 aa17.47■□□□□ 0.39
SCLT1-209ENST00000511426 NPY5RQ15761 445 aa17.47■□□□□ 0.39
SCLT1-209ENST00000511426 CCDC96Q2M329 555 aa17.47■□□□□ 0.39
SCLT1-209ENST00000511426 SLC35G1Q2M3R5 365 aa17.47■□□□□ 0.39
SCLT1-209ENST00000511426 ADALQ6DHV7 355 aa17.47■□□□□ 0.39
SCLT1-209ENST00000511426 BICD2Q8TD16 824 aa17.47■□□□□ 0.39
SCLT1-209ENST00000511426 L3MBTL3Q96JM7 780 aaPredicted RBP17.47■□□□□ 0.39
SCLT1-209ENST00000511426 ZMYND12Q9H0C1 365 aa17.47■□□□□ 0.39
SCLT1-209ENST00000511426 GLT8D2Q9H1C3 349 aa17.47■□□□□ 0.39
SCLT1-209ENST00000511426 PNMA6FA0A0J9YX94 578 aa17.46■□□□□ 0.39
SCLT1-209ENST00000511426 STXBP3O00186 592 aa17.46■□□□□ 0.39
SCLT1-209ENST00000511426 SPTLC2O15270 562 aa17.46■□□□□ 0.39
SCLT1-209ENST00000511426 SF3A1Q15459 793 aaKnown RBP17.46■□□□□ 0.39
SCLT1-209ENST00000511426 CCDC183Q5T5S1 534 aa17.46■□□□□ 0.39
SCLT1-209ENST00000511426 C9orf131Q5VYM1 1079 aa17.46■□□□□ 0.39
SCLT1-209ENST00000511426 WWC2Q6AWC2 1192 aa17.46■□□□□ 0.39
SCLT1-209ENST00000511426 CLEC10AQ8IUN9 316 aa17.46■□□□□ 0.39
SCLT1-209ENST00000511426 BLIDQ8IZY5 108 aa17.46■□□□□ 0.39
SCLT1-209ENST00000511426 TNFRSF25Q93038 417 aa17.46■□□□□ 0.39
SCLT1-209ENST00000511426 DDX19AQ9NUU7 478 aaKnown RBP17.46■□□□□ 0.39
SCLT1-209ENST00000511426 MTMR7Q9Y216 660 aa17.46■□□□□ 0.39
SCLT1-209ENST00000511426 PHF20L1A8MW92 1017 aa17.45■□□□□ 0.38
SCLT1-209ENST00000511426 PLA2G6O60733 806 aa17.45■□□□□ 0.38
SCLT1-209ENST00000511426 RRP1BQ14684 758 aaKnown RBP17.45■□□□□ 0.38
SCLT1-209ENST00000511426 BTNL9Q6UXG8 535 aa17.45■□□□□ 0.38
SCLT1-209ENST00000511426 HEATR3Q7Z4Q2 680 aa17.45■□□□□ 0.38
SCLT1-209ENST00000511426 SHISA4Q96DD7 197 aa17.45■□□□□ 0.38
SCLT1-209ENST00000511426 ZNF341Q9BYN7 854 aa17.45■□□□□ 0.38
SCLT1-209ENST00000511426 C6orf50Q9HD87 102 aa17.45■□□□□ 0.38
SCLT1-209ENST00000511426 FRMPD2Q68DX3 1309 aaPredicted RBP17.45■□□□□ 0.38
SCLT1-209ENST00000511426 hCG_1642624A0A1W2PR95 340 aa17.45■□□□□ 0.38
SCLT1-209ENST00000511426 ZBTB5O15062 677 aa17.45■□□□□ 0.38
SCLT1-209ENST00000511426 NDUFB10O96000 172 aa17.45■□□□□ 0.38
SCLT1-209ENST00000511426 SLURP2P0DP57 97 aa17.45■□□□□ 0.38
SCLT1-209ENST00000511426 BMP3P12645 472 aa17.45■□□□□ 0.38
SCLT1-209ENST00000511426 ME1P48163 572 aa17.45■□□□□ 0.38
SCLT1-209ENST00000511426 NR5A1Q13285 461 aa17.45■□□□□ 0.38
SCLT1-209ENST00000511426 ANGEL2Q5VTE6 544 aaKnown RBP17.45■□□□□ 0.38
SCLT1-209ENST00000511426 TRPM4Q8TD43 1214 aa17.45■□□□□ 0.38
SCLT1-209ENST00000511426 PGBD1Q96JS3 809 aa17.45■□□□□ 0.38
SCLT1-209ENST00000511426 CLIC4Q9Y696 253 aa17.45■□□□□ 0.38
SCLT1-209ENST00000511426 NAPAP54920 295 aa17.44■□□□□ 0.38
SCLT1-209ENST00000511426 ZSCAN23Q3MJ62 389 aa17.44■□□□□ 0.38
SCLT1-209ENST00000511426 SUPT20HL1Q3ZLR7 823 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms