RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 RNF141Q8WVD5 230 aa5.12□□□□□ -1.59
TRAPPC11-207ENST00000511409 SMARCC1Q92922 1105 aaPredicted RBP5.12□□□□□ -1.59
TRAPPC11-207ENST00000511409 MKL1Q969V6 931 aa5.12□□□□□ -1.59
TRAPPC11-207ENST00000511409 PPP1R14AQ96A00 147 aa5.12□□□□□ -1.59
TRAPPC11-207ENST00000511409 ASPNQ9BXN1 380 aa5.12□□□□□ -1.59
TRAPPC11-207ENST00000511409 SNTG2Q9NY99 539 aa5.12□□□□□ -1.59
TRAPPC11-207ENST00000511409 FAM221BA6H8Z2 402 aa5.11□□□□□ -1.59
TRAPPC11-207ENST00000511409 FAM155AB1AL88 458 aaPredicted RBP5.11□□□□□ -1.59
TRAPPC11-207ENST00000511409 LRRN2O75325 713 aa5.11□□□□□ -1.59
TRAPPC11-207ENST00000511409 TCEAL1Q15170 157 aa5.11□□□□□ -1.59
TRAPPC11-207ENST00000511409 MTERF2Q49AM1 385 aa5.11□□□□□ -1.59
TRAPPC11-207ENST00000511409 AXDND1Q5T1B0 1012 aaPredicted RBP5.11□□□□□ -1.59
TRAPPC11-207ENST00000511409 MRM1Q6IN84 353 aaKnown RBP5.11□□□□□ -1.59
TRAPPC11-207ENST00000511409 VSIG10LQ86VR7 867 aa5.11□□□□□ -1.59
TRAPPC11-207ENST00000511409 KLHL6Q8WZ60 621 aa5.11□□□□□ -1.59
TRAPPC11-207ENST00000511409 CCDC113Q9H0I3 377 aa5.11□□□□□ -1.59
TRAPPC11-207ENST00000511409 ASCC2Q9H1I8 757 aaPredicted RBP5.11□□□□□ -1.59
TRAPPC11-207ENST00000511409 BSDC1Q9NW68 430 aaPredicted RBP5.11□□□□□ -1.59
TRAPPC11-207ENST00000511409 KCNH3Q9ULD8 1083 aa5.11□□□□□ -1.59
TRAPPC11-207ENST00000511409 SUGT1Q9Y2Z0 365 aa5.11□□□□□ -1.59
TRAPPC11-207ENST00000511409 CNTNAP4Q9C0A0 1308 aa5.11□□□□□ -1.59
TRAPPC11-207ENST00000511409 RBAK-RBAKDNI3L0D1 243 aa5.1□□□□□ -1.59
TRAPPC11-207ENST00000511409 IGF2BP3O00425 579 aaKnown RBP eCLIP5.1□□□□□ -1.59
TRAPPC11-207ENST00000511409 SUSD5O60279 629 aa5.1□□□□□ -1.59
TRAPPC11-207ENST00000511409 EPHX1P07099 455 aa5.1□□□□□ -1.59
TRAPPC11-207ENST00000511409 NAT2P11245 290 aa5.1□□□□□ -1.59
TRAPPC11-207ENST00000511409 ITIH2P19823 946 aa5.1□□□□□ -1.59
TRAPPC11-207ENST00000511409 AUHQ13825 339 aaKnown RBP5.1□□□□□ -1.59
TRAPPC11-207ENST00000511409 SV2CQ496J9 727 aa5.1□□□□□ -1.59
TRAPPC11-207ENST00000511409 NOL9Q5SY16 702 aaKnown RBP5.1□□□□□ -1.59
TRAPPC11-207ENST00000511409 FAM214BQ7L5A3 538 aa5.1□□□□□ -1.59
TRAPPC11-207ENST00000511409 NOP9Q86U38 636 aaKnown RBP5.1□□□□□ -1.59
TRAPPC11-207ENST00000511409 C7orf61Q8IZ16 206 aa5.1□□□□□ -1.59
TRAPPC11-207ENST00000511409 FAM181AQ8N9Y4 354 aa5.1□□□□□ -1.59
TRAPPC11-207ENST00000511409 COX4I2Q96KJ9 171 aa5.1□□□□□ -1.59
TRAPPC11-207ENST00000511409 FGD4Q96M96 766 aa5.1□□□□□ -1.59
TRAPPC11-207ENST00000511409 FBXL18Q96ME1 805 aa5.1□□□□□ -1.59
TRAPPC11-207ENST00000511409 HEXIM2Q96MH2 286 aaKnown RBP5.1□□□□□ -1.59
TRAPPC11-207ENST00000511409 APBA2Q99767 749 aa5.1□□□□□ -1.59
TRAPPC11-207ENST00000511409 HAUS7Q99871 368 aa5.1□□□□□ -1.59
TRAPPC11-207ENST00000511409 GBP3Q9H0R5 595 aa5.1□□□□□ -1.59
TRAPPC11-207ENST00000511409 CWC22Q9HCG8 908 aaKnown RBP5.1□□□□□ -1.59
TRAPPC11-207ENST00000511409 LRP2BPQ9P2M1 347 aa5.1□□□□□ -1.59
TRAPPC11-207ENST00000511409 CCDC39Q9UFE4 941 aa5.1□□□□□ -1.59
TRAPPC11-207ENST00000511409 ZC3H7BQ9UGR2 993 aaKnown RBP5.1□□□□□ -1.59
TRAPPC11-207ENST00000511409 PFDN2Q9UHV9 154 aa5.1□□□□□ -1.59
TRAPPC11-207ENST00000511409 SHROOM4Q9ULL8 1493 aa5.1□□□□□ -1.59
TRAPPC11-207ENST00000511409 PCDHB12Q9Y5F1 795 aa5.1□□□□□ -1.59
TRAPPC11-207ENST00000511409 LOC105371045A0A1W2PR82 267 aa5.09□□□□□ -1.59
TRAPPC11-207ENST00000511409 ANKRD34BA5PLL1 514 aa5.09□□□□□ -1.59
TRAPPC11-207ENST00000511409 PRR33A8MZF0 331 aa5.09□□□□□ -1.59
TRAPPC11-207ENST00000511409 PPM1BO75688 479 aa5.09□□□□□ -1.59
TRAPPC11-207ENST00000511409 ITGA4P13612 1032 aa5.09□□□□□ -1.59
TRAPPC11-207ENST00000511409 KIR3DL1P43629 444 aa5.09□□□□□ -1.59
TRAPPC11-207ENST00000511409 RASGRF1Q13972 1273 aa5.09□□□□□ -1.59
TRAPPC11-207ENST00000511409 RASA3Q14644 834 aa5.09□□□□□ -1.59
TRAPPC11-207ENST00000511409 CLEC16AQ2KHT3 1053 aa5.09□□□□□ -1.59
TRAPPC11-207ENST00000511409 NBPF9Q3BBW0 867 aa5.09□□□□□ -1.59
TRAPPC11-207ENST00000511409 GIMAP6Q6P9H5 292 aa5.09□□□□□ -1.59
TRAPPC11-207ENST00000511409 NFXL1Q6ZNB6 911 aa5.09□□□□□ -1.59
TRAPPC11-207ENST00000511409 LRP10Q7Z4F1 713 aa5.09□□□□□ -1.59
TRAPPC11-207ENST00000511409 STK11IPQ8N1F8 1099 aa5.09□□□□□ -1.59
TRAPPC11-207ENST00000511409 MFSD4AQ8N468 514 aa5.09□□□□□ -1.59
TRAPPC11-207ENST00000511409 ADCY4Q8NFM4 1077 aa5.09□□□□□ -1.59
TRAPPC11-207ENST00000511409 VWCEQ96DN2 955 aa5.09□□□□□ -1.59
TRAPPC11-207ENST00000511409 MISP3Q96FF7 219 aa5.09□□□□□ -1.59
TRAPPC11-207ENST00000511409 DNAJC7Q99615 494 aa5.09□□□□□ -1.59
TRAPPC11-207ENST00000511409 KRTAP4-2Q9BYR5 136 aa5.09□□□□□ -1.59
TRAPPC11-207ENST00000511409 MSRB2Q9Y3D2 182 aa5.09□□□□□ -1.59
TRAPPC11-207ENST00000511409 ZNF451Q9Y4E5 1061 aa5.09□□□□□ -1.59
TRAPPC11-207ENST00000511409 AGRPO00253 132 aa5.08□□□□□ -1.6
TRAPPC11-207ENST00000511409 MEIS1O00470 390 aa5.08□□□□□ -1.6
TRAPPC11-207ENST00000511409 TNK2Q07912 1038 aa5.08□□□□□ -1.6
TRAPPC11-207ENST00000511409 SNW1Q13573 536 aaKnown RBP5.08□□□□□ -1.6
TRAPPC11-207ENST00000511409 PPP2R5DQ14738 602 aa5.08□□□□□ -1.6
TRAPPC11-207ENST00000511409 CDKAL1Q5VV42 579 aa5.08□□□□□ -1.6
TRAPPC11-207ENST00000511409 POU5F2Q8N7G0 328 aa5.08□□□□□ -1.6
TRAPPC11-207ENST00000511409 DTWD2Q8NBA8 298 aa5.08□□□□□ -1.6
TRAPPC11-207ENST00000511409 ST13P5Q8NFI4 369 aaPredicted RBP5.08□□□□□ -1.6
TRAPPC11-207ENST00000511409 BRF1Q92994 677 aa5.08□□□□□ -1.6
TRAPPC11-207ENST00000511409 Q96M66 194 aa5.08□□□□□ -1.6
TRAPPC11-207ENST00000511409 DSCC1Q9BVC3 393 aa5.08□□□□□ -1.6
TRAPPC11-207ENST00000511409 PRDM14Q9GZV8 571 aa5.08□□□□□ -1.6
TRAPPC11-207ENST00000511409 GFOD1Q9NXC2 390 aa5.08□□□□□ -1.6
TRAPPC11-207ENST00000511409 WHRNQ9P202 907 aa5.08□□□□□ -1.6
TRAPPC11-207ENST00000511409 TMA7Q9Y2S6 64 aaKnown RBP5.08□□□□□ -1.6
TRAPPC11-207ENST00000511409 KDM2BQ8NHM5 1336 aa5.07□□□□□ -1.6
TRAPPC11-207ENST00000511409 CBFA2T2O43439 604 aa5.07□□□□□ -1.6
TRAPPC11-207ENST00000511409 SMARCA5O60264 1052 aaPredicted RBP5.07□□□□□ -1.6
TRAPPC11-207ENST00000511409 CEACAM5P06731 702 aa5.07□□□□□ -1.6
TRAPPC11-207ENST00000511409 ZNF865P0CJ78 1059 aaPredicted RBP5.07□□□□□ -1.6
TRAPPC11-207ENST00000511409 CD247P20963 164 aa5.07□□□□□ -1.6
TRAPPC11-207ENST00000511409 ZNF143P52747 638 aaPredicted RBP5.07□□□□□ -1.6
TRAPPC11-207ENST00000511409 OXCT1P55809 520 aa5.07□□□□□ -1.6
TRAPPC11-207ENST00000511409 SSRP1Q08945 709 aaKnown RBP5.07□□□□□ -1.6
TRAPPC11-207ENST00000511409 NMIQ13287 307 aaPredicted RBP5.07□□□□□ -1.6
TRAPPC11-207ENST00000511409 SLC10A6Q3KNW5 377 aa5.07□□□□□ -1.6
TRAPPC11-207ENST00000511409 ANKRD39Q53RE8 183 aa5.07□□□□□ -1.6
TRAPPC11-207ENST00000511409 C22orf34Q6ZV56 151 aa5.07□□□□□ -1.6
TRAPPC11-207ENST00000511409 CBLL1Q75N03 491 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms