RNA–Protein interactions for RNA: ENST00000511313.5

POLR2J3-215, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best) BASIC

Gene POLR2J3, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-215ENST00000511313 CCDC117Q8IWD4 279 aaPredicted RBP11□□□□□ -0.65
POLR2J3-215ENST00000511313 WNK4Q96J92 1243 aa11□□□□□ -0.65
POLR2J3-215ENST00000511313 GLIS2Q9BZE0 524 aaPredicted RBP11□□□□□ -0.65
POLR2J3-215ENST00000511313 LUC7LQ9NQ29 371 aaKnown RBP11□□□□□ -0.65
POLR2J3-215ENST00000511313 POLLQ9UGP5 575 aa11□□□□□ -0.65
POLR2J3-215ENST00000511313 DPP7Q9UHL4 492 aa11□□□□□ -0.65
POLR2J3-215ENST00000511313 LETM1O95202 739 aaPredicted RBP10.99□□□□□ -0.65
POLR2J3-215ENST00000511313 SNX16P57768 344 aa10.99□□□□□ -0.65
POLR2J3-215ENST00000511313 TAF12Q16514 161 aa10.99□□□□□ -0.65
POLR2J3-215ENST00000511313 PROM2Q8N271 834 aa10.99□□□□□ -0.65
POLR2J3-215ENST00000511313 LLPHQ9BRT6 129 aaKnown RBP10.99□□□□□ -0.65
POLR2J3-215ENST00000511313 SLC15A5A6NIM6 579 aa10.99□□□□□ -0.65
POLR2J3-215ENST00000511313 KRT2P35908 639 aa10.99□□□□□ -0.65
POLR2J3-215ENST00000511313 GLG1Q92896 1179 aa10.99□□□□□ -0.65
POLR2J3-215ENST00000511313 AAASQ9NRG9 546 aa10.99□□□□□ -0.65
POLR2J3-215ENST00000511313 ZBTB21Q9ULJ3 1066 aa10.99□□□□□ -0.65
POLR2J3-215ENST00000511313 SCP2P22307 547 aa10.99□□□□□ -0.65
POLR2J3-215ENST00000511313 UBA7P41226 1012 aa10.99□□□□□ -0.65
POLR2J3-215ENST00000511313 ORC2Q13416 577 aaPredicted RBP10.99□□□□□ -0.65
POLR2J3-215ENST00000511313 CDC42EP5Q6NZY7 148 aa10.99□□□□□ -0.65
POLR2J3-215ENST00000511313 ZBED2Q9BTP6 218 aa10.99□□□□□ -0.65
POLR2J3-215ENST00000511313 WDR19Q8NEZ3 1342 aa10.99□□□□□ -0.65
POLR2J3-215ENST00000511313 ORC4O43929 436 aa10.99□□□□□ -0.65
POLR2J3-215ENST00000511313 SPOUT1Q5T280 376 aaKnown RBP10.99□□□□□ -0.65
POLR2J3-215ENST00000511313 OPTNQ96CV9 577 aa10.99□□□□□ -0.65
POLR2J3-215ENST00000511313 ADPGKQ9BRR6 497 aa10.99□□□□□ -0.65
POLR2J3-215ENST00000511313 ESYT1Q9BSJ8 1104 aa10.99□□□□□ -0.65
POLR2J3-215ENST00000511313 ZSCAN16Q9H4T2 348 aaPredicted RBP10.99□□□□□ -0.65
POLR2J3-215ENST00000511313 VCPKMTQ9H867 229 aa10.99□□□□□ -0.65
POLR2J3-215ENST00000511313 MICU3Q86XE3 530 aa10.98□□□□□ -0.65
POLR2J3-215ENST00000511313 PNMA1Q8ND90 353 aa10.98□□□□□ -0.65
POLR2J3-215ENST00000511313 NEDD1Q8NHV4 660 aa10.98□□□□□ -0.65
POLR2J3-215ENST00000511313 DPF3Q92784 378 aa10.98□□□□□ -0.65
POLR2J3-215ENST00000511313 EDC3Q96F86 508 aaKnown RBP10.98□□□□□ -0.65
POLR2J3-215ENST00000511313 BCL2L12Q9HB09 334 aa10.98□□□□□ -0.65
POLR2J3-215ENST00000511313 CCDC85CA6NKD9 419 aa10.98□□□□□ -0.65
POLR2J3-215ENST00000511313 MAFGO15525 162 aa10.98□□□□□ -0.65
POLR2J3-215ENST00000511313 HOXA2O43364 376 aa10.98□□□□□ -0.65
POLR2J3-215ENST00000511313 MYCLP12524 364 aaPredicted RBP10.98□□□□□ -0.65
POLR2J3-215ENST00000511313 NONOQ15233 471 aaKnown RBP eCLIP10.98□□□□□ -0.65
POLR2J3-215ENST00000511313 ZNF521Q96K83 1311 aa10.98□□□□□ -0.65
POLR2J3-215ENST00000511313 GTPBP6O43824 516 aaPredicted RBP10.98□□□□□ -0.65
POLR2J3-215ENST00000511313 ZSCAN20P17040 1043 aaPredicted RBP10.98□□□□□ -0.65
POLR2J3-215ENST00000511313 KRT85P78386 507 aa10.98□□□□□ -0.65
POLR2J3-215ENST00000511313 LARP1BQ659C4 914 aaKnown RBP10.98□□□□□ -0.65
POLR2J3-215ENST00000511313 SLC26A6Q9BXS9 759 aa10.98□□□□□ -0.65
POLR2J3-215ENST00000511313 ZBTB12Q9Y330 459 aaPredicted RBP10.98□□□□□ -0.65
POLR2J3-215ENST00000511313 NHSQ6T4R5 1651 aa10.98□□□□□ -0.65
POLR2J3-215ENST00000511313 SSBP05455 408 aaKnown RBP eCLIP10.97□□□□□ -0.65
POLR2J3-215ENST00000511313 SKIP12755 728 aa10.97□□□□□ -0.65
POLR2J3-215ENST00000511313 SMARCA1P28370 1054 aa10.97□□□□□ -0.65
POLR2J3-215ENST00000511313 KIF23Q02241 960 aaPredicted RBP10.97□□□□□ -0.65
POLR2J3-215ENST00000511313 MIGA2Q7L4E1 593 aa10.97□□□□□ -0.65
POLR2J3-215ENST00000511313 EAF2Q96CJ1 260 aaPredicted RBP10.97□□□□□ -0.65
POLR2J3-215ENST00000511313 WDR18Q9BV38 432 aa10.97□□□□□ -0.65
POLR2J3-215ENST00000511313 DDX11L8A8MPP1 907 aa10.97□□□□□ -0.65
POLR2J3-215ENST00000511313 CAP2P40123 477 aa10.97□□□□□ -0.65
POLR2J3-215ENST00000511313 HAND2P61296 217 aa10.97□□□□□ -0.65
POLR2J3-215ENST00000511313 E2F5Q15329 346 aa10.97□□□□□ -0.65
POLR2J3-215ENST00000511313 RNF207Q6ZRF8 634 aa10.97□□□□□ -0.65
POLR2J3-215ENST00000511313 AGTPBP1Q9UPW5 1226 aa10.97□□□□□ -0.65
POLR2J3-215ENST00000511313 TLL2Q9Y6L7 1015 aa10.97□□□□□ -0.65
POLR2J3-215ENST00000511313 KINO60870 393 aaKnown RBP10.97□□□□□ -0.65
POLR2J3-215ENST00000511313 FILIP1LQ4L180 1135 aa10.97□□□□□ -0.65
POLR2J3-215ENST00000511313 NECAB2Q7Z6G3 386 aa10.97□□□□□ -0.65
POLR2J3-215ENST00000511313 NEK9Q8TD19 979 aa10.97□□□□□ -0.65
POLR2J3-215ENST00000511313 TCP11Q8WWU5 503 aa10.97□□□□□ -0.65
POLR2J3-215ENST00000511313 TEKT3Q9BXF9 490 aa10.97□□□□□ -0.65
POLR2J3-215ENST00000511313 PCDHA1Q9Y5I3 950 aa10.97□□□□□ -0.65
POLR2J3-215ENST00000511313 BACE1P56817 501 aa10.97□□□□□ -0.65
POLR2J3-215ENST00000511313 IMPG2Q9BZV3 1241 aa10.97□□□□□ -0.65
POLR2J3-215ENST00000511313 TM6SF1Q9BZW5 370 aa10.97□□□□□ -0.65
POLR2J3-215ENST00000511313 TRIM6Q9C030 488 aaPredicted RBP10.97□□□□□ -0.65
POLR2J3-215ENST00000511313 RMND1Q9NWS8 449 aa10.97□□□□□ -0.65
POLR2J3-215ENST00000511313 KDM3AQ9Y4C1 1321 aa10.97□□□□□ -0.65
POLR2J3-215ENST00000511313 FSD2A1L4K1 749 aa10.96□□□□□ -0.65
POLR2J3-215ENST00000511313 TRPA1O75762 1119 aa10.96□□□□□ -0.65
POLR2J3-215ENST00000511313 CFBP00751 764 aa10.96□□□□□ -0.65
POLR2J3-215ENST00000511313 NMRK2Q9NPI5 230 aa10.96□□□□□ -0.65
POLR2J3-215ENST00000511313 MKRN3Q13064 507 aaKnown RBP10.96□□□□□ -0.65
POLR2J3-215ENST00000511313 ZNF784Q8NCA9 323 aaPredicted RBP10.96□□□□□ -0.65
POLR2J3-215ENST00000511313 NSUN4Q96CB9 384 aaKnown RBP10.96□□□□□ -0.65
POLR2J3-215ENST00000511313 KIAA1683Q9H0B3 1180 aa10.96□□□□□ -0.65
POLR2J3-215ENST00000511313 SPDYE5A6NIY4 337 aa10.96□□□□□ -0.66
POLR2J3-215ENST00000511313 WNT10BO00744 389 aa10.96□□□□□ -0.66
POLR2J3-215ENST00000511313 PTGER2P43116 358 aa10.96□□□□□ -0.66
POLR2J3-215ENST00000511313 REXO1Q8N1G1 1221 aaKnown RBP10.96□□□□□ -0.66
POLR2J3-215ENST00000511313 OSBPL3Q9H4L5 887 aa10.96□□□□□ -0.66
POLR2J3-215ENST00000511313 RPAP3Q9H6T3 665 aaPredicted RBP10.96□□□□□ -0.66
POLR2J3-215ENST00000511313 STAG3L1P0CL83 205 aa10.96□□□□□ -0.66
POLR2J3-215ENST00000511313 STRN3Q13033 797 aa10.96□□□□□ -0.66
POLR2J3-215ENST00000511313 ODF2Q5BJF6 829 aa10.96□□□□□ -0.66
POLR2J3-215ENST00000511313 PSTPIP2Q9H939 334 aa10.96□□□□□ -0.66
POLR2J3-215ENST00000511313 DBNLQ9UJU6 430 aaKnown RBP10.96□□□□□ -0.66
POLR2J3-215ENST00000511313 JAK3P52333 1124 aa10.95□□□□□ -0.66
POLR2J3-215ENST00000511313 DIXDC1Q155Q3 683 aa10.95□□□□□ -0.66
POLR2J3-215ENST00000511313 KYAT1Q16773 422 aa10.95□□□□□ -0.66
POLR2J3-215ENST00000511313 NT5C3AQ9H0P0 336 aa10.95□□□□□ -0.66
POLR2J3-215ENST00000511313 ZHX3Q9H4I2 956 aa10.95□□□□□ -0.66
POLR2J3-215ENST00000511313 RNF146Q9NTX7 359 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms