RNA–Protein interactions for RNA: ENST00000511125.1

SMAD1-209, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 3,293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-209ENST00000511125 C8orf76Q96K31 380 aa9.35□□□□□ -0.91
SMAD1-209ENST00000511125 ALDH8A1Q9H2A2 487 aaPredicted RBP9.35□□□□□ -0.91
SMAD1-209ENST00000511125 HOMER2Q9NSB8 354 aa9.35□□□□□ -0.91
SMAD1-209ENST00000511125 IGKV6D-41A0A0C4DH26 115 aa9.34□□□□□ -0.91
SMAD1-209ENST00000511125 IRF6O14896 467 aa9.34□□□□□ -0.91
SMAD1-209ENST00000511125 CTNND1O60716 968 aaKnown RBP9.34□□□□□ -0.91
SMAD1-209ENST00000511125 MAP3K9P80192 1104 aa9.34□□□□□ -0.91
SMAD1-209ENST00000511125 TRIM22Q8IYM9 498 aa9.34□□□□□ -0.91
SMAD1-209ENST00000511125 TNPO1Q92973 898 aaKnown RBP9.34□□□□□ -0.91
SMAD1-209ENST00000511125 FTOQ9C0B1 505 aaKnown RBP eCLIP9.34□□□□□ -0.91
SMAD1-209ENST00000511125 CHMP5Q9NZZ3 219 aa9.34□□□□□ -0.91
SMAD1-209ENST00000511125 KIF5BP33176 963 aa9.34□□□□□ -0.91
SMAD1-209ENST00000511125 NOM1Q5C9Z4 860 aaKnown RBP9.34□□□□□ -0.91
SMAD1-209ENST00000511125 TMTC3Q6ZXV5 915 aa9.34□□□□□ -0.91
SMAD1-209ENST00000511125 SCYL3Q8IZE3 742 aa9.34□□□□□ -0.91
SMAD1-209ENST00000511125 ZFP91Q96JP5 570 aaPredicted RBP9.34□□□□□ -0.91
SMAD1-209ENST00000511125 PGBD1Q96JS3 809 aa9.34□□□□□ -0.91
SMAD1-209ENST00000511125 IREB2P48200 963 aaKnown RBP9.34□□□□□ -0.91
SMAD1-209ENST00000511125 METTL16Q86W50 562 aaKnown RBP9.34□□□□□ -0.91
SMAD1-209ENST00000511125 ADGRF4Q8IZF3 695 aa9.34□□□□□ -0.91
SMAD1-209ENST00000511125 SLC10A4Q96EP9 437 aa9.34□□□□□ -0.91
SMAD1-209ENST00000511125 TCP11L1Q9NUJ3 509 aa9.34□□□□□ -0.91
SMAD1-209ENST00000511125 WDR19Q8NEZ3 1342 aa9.34□□□□□ -0.91
SMAD1-209ENST00000511125 SSC5DA1L4H1 1573 aa9.33□□□□□ -0.92
SMAD1-209ENST00000511125 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.33□□□□□ -0.92
SMAD1-209ENST00000511125 CCDC196A0A1B0GTZ2 297 aa9.33□□□□□ -0.92
SMAD1-209ENST00000511125 SIPA1L1O43166 1804 aa9.33□□□□□ -0.92
SMAD1-209ENST00000511125 BMP3P12645 472 aa9.33□□□□□ -0.92
SMAD1-209ENST00000511125 EVCP57679 992 aa9.33□□□□□ -0.92
SMAD1-209ENST00000511125 NR5A1Q13285 461 aa9.33□□□□□ -0.92
SMAD1-209ENST00000511125 GRM4Q14833 912 aa9.33□□□□□ -0.92
SMAD1-209ENST00000511125 CST9Q5W186 159 aa9.33□□□□□ -0.92
SMAD1-209ENST00000511125 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.33□□□□□ -0.92
SMAD1-209ENST00000511125 OXER1Q8TDS5 423 aa9.33□□□□□ -0.92
SMAD1-209ENST00000511125 SNCAIPQ9Y6H5 919 aa9.33□□□□□ -0.92
SMAD1-209ENST00000511125 TBC1D12O60347 775 aa9.33□□□□□ -0.92
SMAD1-209ENST00000511125 FLOT1O75955 427 aa9.33□□□□□ -0.92
SMAD1-209ENST00000511125 DDAH1O94760 285 aa9.33□□□□□ -0.92
SMAD1-209ENST00000511125 ZNF543Q08ER8 600 aa9.33□□□□□ -0.92
SMAD1-209ENST00000511125 PLS1Q14651 629 aa9.33□□□□□ -0.92
SMAD1-209ENST00000511125 ZNF280CQ8ND82 737 aa9.33□□□□□ -0.92
SMAD1-209ENST00000511125 ZC3H15Q8WU90 426 aaKnown RBP9.33□□□□□ -0.92
SMAD1-209ENST00000511125 OPTNQ96CV9 577 aa9.33□□□□□ -0.92
SMAD1-209ENST00000511125 INTS4Q96HW7 963 aaKnown RBP9.33□□□□□ -0.92
SMAD1-209ENST00000511125 WNK4Q96J92 1243 aa9.33□□□□□ -0.92
SMAD1-209ENST00000511125 NYAP2Q9P242 653 aa9.33□□□□□ -0.92
SMAD1-209ENST00000511125 ABT1Q9ULW3 272 aaKnown RBP9.33□□□□□ -0.92
SMAD1-209ENST00000511125 FAM205CA6NFA0 338 aa9.32□□□□□ -0.92
SMAD1-209ENST00000511125 HUNKP57058 714 aa9.32□□□□□ -0.92
SMAD1-209ENST00000511125 KRT40Q6A162 431 aa9.32□□□□□ -0.92
SMAD1-209ENST00000511125 TYW1BQ6NUM6 668 aa9.32□□□□□ -0.92
SMAD1-209ENST00000511125 LDHDQ86WU2 507 aa9.32□□□□□ -0.92
SMAD1-209ENST00000511125 SHISA4Q96DD7 197 aa9.32□□□□□ -0.92
SMAD1-209ENST00000511125 EMILIN3Q9NT22 766 aa9.32□□□□□ -0.92
SMAD1-209ENST00000511125 MTMR6Q9Y217 621 aa9.32□□□□□ -0.92
SMAD1-209ENST00000511125 LAMB1P07942 1786 aa9.32□□□□□ -0.92
SMAD1-209ENST00000511125 PALM3A6NDB9 673 aaPredicted RBP9.32□□□□□ -0.92
SMAD1-209ENST00000511125 BTBD18B2RXH4 712 aa9.32□□□□□ -0.92
SMAD1-209ENST00000511125 CALM1P0DP23 149 aa9.32□□□□□ -0.92
SMAD1-209ENST00000511125 CALM2P0DP24 149 aa9.32□□□□□ -0.92
SMAD1-209ENST00000511125 CALM3P0DP25 149 aa9.32□□□□□ -0.92
SMAD1-209ENST00000511125 IFNAR1P17181 557 aa9.32□□□□□ -0.92
SMAD1-209ENST00000511125 NLRP5P59047 1200 aa9.32□□□□□ -0.92
SMAD1-209ENST00000511125 TRIM29Q14134 588 aa9.32□□□□□ -0.92
SMAD1-209ENST00000511125 TREML2Q5T2D2 321 aa9.32□□□□□ -0.92
SMAD1-209ENST00000511125 ARMC9Q7Z3E5 817 aa9.32□□□□□ -0.92
SMAD1-209ENST00000511125 RPAP3Q9H6T3 665 aaPredicted RBP9.32□□□□□ -0.92
SMAD1-209ENST00000511125 GBA2Q9HCG7 927 aaPredicted RBP9.32□□□□□ -0.92
SMAD1-209ENST00000511125 MYH8P13535 1937 aa9.32□□□□□ -0.92
SMAD1-209ENST00000511125 FIBPO43427 364 aa9.32□□□□□ -0.92
SMAD1-209ENST00000511125 CDKL5O76039 1030 aa9.32□□□□□ -0.92
SMAD1-209ENST00000511125 FMNL1O95466 1100 aaPredicted RBP9.32□□□□□ -0.92
SMAD1-209ENST00000511125 DNM1Q05193 864 aaKnown RBP9.32□□□□□ -0.92
SMAD1-209ENST00000511125 PKN1Q16512 942 aa9.32□□□□□ -0.92
SMAD1-209ENST00000511125 CCDC178Q5BJE1 867 aa9.32□□□□□ -0.92
SMAD1-209ENST00000511125 CHADLQ6NUI6 762 aa9.32□□□□□ -0.92
SMAD1-209ENST00000511125 SMARCC2Q8TAQ2 1214 aa9.32□□□□□ -0.92
SMAD1-209ENST00000511125 VCPKMTQ9H867 229 aa9.32□□□□□ -0.92
SMAD1-209ENST00000511125 JMJD4Q9H9V9 463 aa9.32□□□□□ -0.92
SMAD1-209ENST00000511125 GOPCQ9HD26 462 aa9.32□□□□□ -0.92
SMAD1-209ENST00000511125 SEC63Q9UGP8 760 aaKnown RBP9.32□□□□□ -0.92
SMAD1-209ENST00000511125 TMX2Q9Y320 296 aa9.32□□□□□ -0.92
SMAD1-209ENST00000511125 CNTNAP5Q8WYK1 1306 aa9.31□□□□□ -0.92
SMAD1-209ENST00000511125 PITPNM2Q9BZ72 1349 aa9.31□□□□□ -0.92
SMAD1-209ENST00000511125 ZC3H4Q9UPT8 1303 aaKnown RBP9.31□□□□□ -0.92
SMAD1-209ENST00000511125 KIF28PB7ZC32 967 aa9.31□□□□□ -0.92
SMAD1-209ENST00000511125 FUT2Q10981 343 aa9.31□□□□□ -0.92
SMAD1-209ENST00000511125 C2orf69Q8N8R5 385 aa9.31□□□□□ -0.92
SMAD1-209ENST00000511125 CWC22Q9HCG8 908 aaKnown RBP9.31□□□□□ -0.92
SMAD1-209ENST00000511125 ZSCAN22P10073 491 aaPredicted RBP9.31□□□□□ -0.92
SMAD1-209ENST00000511125 VCAM1P19320 739 aa9.31□□□□□ -0.92
SMAD1-209ENST00000511125 MMP14P50281 582 aa9.31□□□□□ -0.92
SMAD1-209ENST00000511125 NAPAP54920 295 aa9.31□□□□□ -0.92
SMAD1-209ENST00000511125 HMGN5P82970 282 aaKnown RBP9.31□□□□□ -0.92
SMAD1-209ENST00000511125 WWC2Q6AWC2 1192 aa9.31□□□□□ -0.92
SMAD1-209ENST00000511125 ANKRD13AQ8IZ07 590 aa9.31□□□□□ -0.92
SMAD1-209ENST00000511125 FBXL16Q8N461 479 aa9.31□□□□□ -0.92
SMAD1-209ENST00000511125 RRP36Q96EU6 259 aaKnown RBP9.31□□□□□ -0.92
SMAD1-209ENST00000511125 PAGR1Q9BTK6 254 aa9.31□□□□□ -0.92
SMAD1-209ENST00000511125 RBM28Q9NW13 759 aaKnown RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms