RNA–Protein interactions for RNA: ENST00000510638.1

NFKB1-209, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 4

Gene NFKB1, Length 628 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-209ENST00000510638 LAMA4Q16363 1823 aa10.1□□□□□ -0.79
NFKB1-209ENST00000510638 MYH1P12882 1939 aa10.09□□□□□ -0.79
NFKB1-209ENST00000510638 BAZ2AQ9UIF9 1905 aaKnown RBP10.09□□□□□ -0.79
NFKB1-209ENST00000510638 SPDYE5A6NIY4 337 aa10.09□□□□□ -0.79
NFKB1-209ENST00000510638 C19orf81C9J6K1 198 aa10.09□□□□□ -0.79
NFKB1-209ENST00000510638 TRPA1O75762 1119 aa10.09□□□□□ -0.79
NFKB1-209ENST00000510638 PDIA3P30101 505 aaKnown RBP10.09□□□□□ -0.79
NFKB1-209ENST00000510638 HUNKP57058 714 aa10.09□□□□□ -0.79
NFKB1-209ENST00000510638 JAG1P78504 1218 aa10.09□□□□□ -0.79
NFKB1-209ENST00000510638 SPP2Q13103 211 aa10.09□□□□□ -0.79
NFKB1-209ENST00000510638 STK3Q13188 491 aa10.09□□□□□ -0.79
NFKB1-209ENST00000510638 RTN1Q16799 776 aa10.09□□□□□ -0.79
NFKB1-209ENST00000510638 SHROOM1Q2M3G4 852 aaPredicted RBP10.09□□□□□ -0.79
NFKB1-209ENST00000510638 FBXO46Q6PJ61 603 aaPredicted RBP10.09□□□□□ -0.79
NFKB1-209ENST00000510638 MOB2Q70IA6 237 aa10.09□□□□□ -0.79
NFKB1-209ENST00000510638 GMCL1P1Q8NEA9 526 aa10.09□□□□□ -0.79
NFKB1-209ENST00000510638 LPAR1Q92633 364 aa10.09□□□□□ -0.79
NFKB1-209ENST00000510638 TMX3Q96JJ7 454 aa10.09□□□□□ -0.79
NFKB1-209ENST00000510638 MAP3K14Q99558 947 aa10.09□□□□□ -0.79
NFKB1-209ENST00000510638 LZTS2Q9BRK4 669 aa10.09□□□□□ -0.79
NFKB1-209ENST00000510638 LARP6Q9BRS8 491 aaKnown RBP10.09□□□□□ -0.79
NFKB1-209ENST00000510638 KIAA1683Q9H0B3 1180 aa10.09□□□□□ -0.79
NFKB1-209ENST00000510638 VCPKMTQ9H867 229 aa10.09□□□□□ -0.79
NFKB1-209ENST00000510638 TMOD4Q9NZQ9 345 aa10.09□□□□□ -0.79
NFKB1-209ENST00000510638 BRPF3Q9ULD4 1205 aa10.09□□□□□ -0.79
NFKB1-209ENST00000510638 MTMR7Q9Y216 660 aa10.09□□□□□ -0.79
NFKB1-209ENST00000510638 TRIM75PA6NK02 468 aa10.08□□□□□ -0.8
NFKB1-209ENST00000510638 F5H6K3 240 aa10.08□□□□□ -0.8
NFKB1-209ENST00000510638 PFKFB2O60825 505 aa10.08□□□□□ -0.8
NFKB1-209ENST00000510638 ABCB7O75027 752 aa10.08□□□□□ -0.8
NFKB1-209ENST00000510638 CDKL5O76039 1030 aa10.08□□□□□ -0.8
NFKB1-209ENST00000510638 CD2BP2O95400 341 aaKnown RBP10.08□□□□□ -0.8
NFKB1-209ENST00000510638 PARP1P09874 1014 aaKnown RBP10.08□□□□□ -0.8
NFKB1-209ENST00000510638 SLC1A4P43007 532 aa10.08□□□□□ -0.8
NFKB1-209ENST00000510638 BACE1P56817 501 aa10.08□□□□□ -0.8
NFKB1-209ENST00000510638 KLRC3Q07444 240 aa10.08□□□□□ -0.8
NFKB1-209ENST00000510638 TROAPQ12815 778 aa10.08□□□□□ -0.8
NFKB1-209ENST00000510638 PPIL2Q13356 520 aa10.08□□□□□ -0.8
NFKB1-209ENST00000510638 MTMR2Q13614 643 aa10.08□□□□□ -0.8
NFKB1-209ENST00000510638 ME3Q16798 604 aa10.08□□□□□ -0.8
NFKB1-209ENST00000510638 CCDC96Q2M329 555 aa10.08□□□□□ -0.8
NFKB1-209ENST00000510638 ASPRV1Q53RT3 343 aa10.08□□□□□ -0.8
NFKB1-209ENST00000510638 GPATCH4Q5T3I0 446 aaKnown RBP10.08□□□□□ -0.8
NFKB1-209ENST00000510638 SLFN13Q68D06 897 aa10.08□□□□□ -0.8
NFKB1-209ENST00000510638 USP17L2Q6R6M4 530 aa10.08□□□□□ -0.8
NFKB1-209ENST00000510638 CCDC84Q86UT8 332 aaPredicted RBP10.08□□□□□ -0.8
NFKB1-209ENST00000510638 FANCBQ8NB91 859 aa10.08□□□□□ -0.8
NFKB1-209ENST00000510638 DCAF4Q8WV16 495 aa10.08□□□□□ -0.8
NFKB1-209ENST00000510638 OPTNQ96CV9 577 aa10.08□□□□□ -0.8
NFKB1-209ENST00000510638 OTUD5Q96G74 571 aa10.08□□□□□ -0.8
NFKB1-209ENST00000510638 GMCL1Q96IK5 515 aa10.08□□□□□ -0.8
NFKB1-209ENST00000510638 CLMNQ96JQ2 1002 aa10.08□□□□□ -0.8
NFKB1-209ENST00000510638 MYL10Q9BUA6 226 aa10.08□□□□□ -0.8
NFKB1-209ENST00000510638 SENP2Q9HC62 589 aa10.08□□□□□ -0.8
NFKB1-209ENST00000510638 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.08□□□□□ -0.8
NFKB1-209ENST00000510638 COLQQ9Y215 455 aaPredicted RBP10.08□□□□□ -0.8
NFKB1-209ENST00000510638 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.08□□□□□ -0.8
NFKB1-209ENST00000510638 CDK5RAP2Q96SN8 1893 aa10.08□□□□□ -0.8
NFKB1-209ENST00000510638 A0A1W2PRG0 241 aa10.07□□□□□ -0.8
NFKB1-209ENST00000510638 CXCL11O14625 94 aa10.07□□□□□ -0.8
NFKB1-209ENST00000510638 PDHBP11177 359 aa10.07□□□□□ -0.8
NFKB1-209ENST00000510638 RXRAP19793 462 aa10.07□□□□□ -0.8
NFKB1-209ENST00000510638 CCT2P78371 535 aaKnown RBP10.07□□□□□ -0.8
NFKB1-209ENST00000510638 IKQ13123 557 aaPredicted RBP10.07□□□□□ -0.8
NFKB1-209ENST00000510638 SNAPC2Q13487 334 aa10.07□□□□□ -0.8
NFKB1-209ENST00000510638 GRM4Q14833 912 aa10.07□□□□□ -0.8
NFKB1-209ENST00000510638 ZYXQ15942 572 aaKnown RBP10.07□□□□□ -0.8
NFKB1-209ENST00000510638 RGMBQ6NW40 437 aa10.07□□□□□ -0.8
NFKB1-209ENST00000510638 SIAH1Q8IUQ4 282 aa10.07□□□□□ -0.8
NFKB1-209ENST00000510638 CCDC144CPQ8IYA2 1237 aa10.07□□□□□ -0.8
NFKB1-209ENST00000510638 ACER1Q8TDN7 264 aa10.07□□□□□ -0.8
NFKB1-209ENST00000510638 GTF3C6Q969F1 213 aa10.07□□□□□ -0.8
NFKB1-209ENST00000510638 ZIC5Q96T25 663 aa10.07□□□□□ -0.8
NFKB1-209ENST00000510638 KIF3AQ9Y496 699 aa10.07□□□□□ -0.8
NFKB1-209ENST00000510638 AFG3L2Q9Y4W6 797 aa10.07□□□□□ -0.8
NFKB1-209ENST00000510638 FAM155AB1AL88 458 aaPredicted RBP10.06□□□□□ -0.8
NFKB1-209ENST00000510638 WDR46O15213 610 aaKnown RBP10.06□□□□□ -0.8
NFKB1-209ENST00000510638 NDUFB10O96000 172 aa10.06□□□□□ -0.8
NFKB1-209ENST00000510638 SNHG28P0DPA3 235 aa10.06□□□□□ -0.8
NFKB1-209ENST00000510638 ZBTB48P10074 688 aaPredicted RBP10.06□□□□□ -0.8
NFKB1-209ENST00000510638 BMP3P12645 472 aa10.06□□□□□ -0.8
NFKB1-209ENST00000510638 ZNF157P51786 506 aaPredicted RBP10.06□□□□□ -0.8
NFKB1-209ENST00000510638 GTF2A2P52657 109 aa10.06□□□□□ -0.8
NFKB1-209ENST00000510638 AKAP17AQ02040 695 aaKnown RBP10.06□□□□□ -0.8
NFKB1-209ENST00000510638 KIF23Q02241 960 aaPredicted RBP10.06□□□□□ -0.8
NFKB1-209ENST00000510638 ZNF543Q08ER8 600 aa10.06□□□□□ -0.8
NFKB1-209ENST00000510638 NOM1Q5C9Z4 860 aaKnown RBP10.06□□□□□ -0.8
NFKB1-209ENST00000510638 FASTKD5Q7L8L6 764 aaKnown RBP10.06□□□□□ -0.8
NFKB1-209ENST00000510638 RAB11FIP4Q86YS3 637 aa10.06□□□□□ -0.8
NFKB1-209ENST00000510638 CCDC83Q8IWF9 413 aa10.06□□□□□ -0.8
NFKB1-209ENST00000510638 TRIM22Q8IYM9 498 aa10.06□□□□□ -0.8
NFKB1-209ENST00000510638 SPICE1Q8N0Z3 855 aa10.06□□□□□ -0.8
NFKB1-209ENST00000510638 NECAB1Q8N987 351 aa10.06□□□□□ -0.8
NFKB1-209ENST00000510638 C12orf42Q96LP6 360 aa10.06□□□□□ -0.8
NFKB1-209ENST00000510638 LLPHQ9BRT6 129 aaKnown RBP10.06□□□□□ -0.8
NFKB1-209ENST00000510638 RBM27Q9P2N5 1060 aaKnown RBP10.06□□□□□ -0.8
NFKB1-209ENST00000510638 SIPA1L1O43166 1804 aa10.05□□□□□ -0.8
NFKB1-209ENST00000510638 NID2Q14112 1375 aa10.05□□□□□ -0.8
NFKB1-209ENST00000510638 KLRF2D3W0D1 207 aa10.05□□□□□ -0.8
NFKB1-209ENST00000510638 IRF6O14896 467 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms