RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 TSG101Q99816 390 aa16.68■□□□□ 0.26
USP38-202ENST00000510377 USP21Q9UK80 565 aa16.68■□□□□ 0.26
USP38-202ENST00000510377 PXDNQ92626 1479 aa16.68■□□□□ 0.26
USP38-202ENST00000510377 PLEKHA8P1O95397 391 aa16.68■□□□□ 0.26
USP38-202ENST00000510377 SF3A3Q12874 501 aaKnown RBP eCLIP16.68■□□□□ 0.26
USP38-202ENST00000510377 TUBB2AQ13885 445 aa16.68■□□□□ 0.26
USP38-202ENST00000510377 PTPROQ16827 1216 aa16.68■□□□□ 0.26
USP38-202ENST00000510377 FOXP4Q8IVH2 680 aaPredicted RBP16.68■□□□□ 0.26
USP38-202ENST00000510377 SECISBP2LQ93073 1101 aaKnown RBP16.68■□□□□ 0.26
USP38-202ENST00000510377 CCDC51Q96ER9 411 aa16.68■□□□□ 0.26
USP38-202ENST00000510377 GSDMAQ96QA5 445 aa16.68■□□□□ 0.26
USP38-202ENST00000510377 TUBB2BQ9BVA1 445 aa16.68■□□□□ 0.26
USP38-202ENST00000510377 ANKIB1Q9P2G1 1089 aa16.68■□□□□ 0.26
USP38-202ENST00000510377 B4DLN1 442 aa16.68■□□□□ 0.26
USP38-202ENST00000510377 VSNL1P62760 191 aa16.68■□□□□ 0.26
USP38-202ENST00000510377 AMPD3Q01432 767 aa16.68■□□□□ 0.26
USP38-202ENST00000510377 PANX2Q96RD6 677 aa16.68■□□□□ 0.26
USP38-202ENST00000510377 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.68■□□□□ 0.26
USP38-202ENST00000510377 RPN1P04843 607 aaKnown RBP16.67■□□□□ 0.26
USP38-202ENST00000510377 USP8P40818 1118 aa16.67■□□□□ 0.26
USP38-202ENST00000510377 LIG3P49916 1009 aa16.67■□□□□ 0.26
USP38-202ENST00000510377 DYMQ7RTS9 669 aa16.67■□□□□ 0.26
USP38-202ENST00000510377 C2CD5Q86YS7 1000 aa16.67■□□□□ 0.26
USP38-202ENST00000510377 ZSCAN10Q96SZ4 725 aaPredicted RBP16.67■□□□□ 0.26
USP38-202ENST00000510377 SOS2Q07890 1332 aaPredicted RBP16.67■□□□□ 0.26
USP38-202ENST00000510377 N4BP1O75113 896 aaKnown RBP16.67■□□□□ 0.26
USP38-202ENST00000510377 ATP6V1AP38606 617 aa16.67■□□□□ 0.26
USP38-202ENST00000510377 LIFRP42702 1097 aa16.67■□□□□ 0.26
USP38-202ENST00000510377 DYNLL1P63167 89 aaKnown RBP16.67■□□□□ 0.26
USP38-202ENST00000510377 RBM28Q9NW13 759 aaKnown RBP16.67■□□□□ 0.26
USP38-202ENST00000510377 TFCP2L1Q9NZI6 479 aa16.67■□□□□ 0.26
USP38-202ENST00000510377 TRIM49BA6NDI0 452 aa16.67■□□□□ 0.26
USP38-202ENST00000510377 ATP1A2P50993 1020 aa16.67■□□□□ 0.26
USP38-202ENST00000510377 PRPF4BQ13523 1007 aaKnown RBP16.67■□□□□ 0.26
USP38-202ENST00000510377 NDUFAB1O14561 156 aa16.66■□□□□ 0.26
USP38-202ENST00000510377 CXCR5P32302 372 aa16.66■□□□□ 0.26
USP38-202ENST00000510377 HPDP32754 393 aaPredicted RBP16.66■□□□□ 0.26
USP38-202ENST00000510377 TRIM65Q6PJ69 517 aa16.66■□□□□ 0.26
USP38-202ENST00000510377 BRINP3Q76B58 766 aa16.66■□□□□ 0.26
USP38-202ENST00000510377 CCDC113Q9H0I3 377 aa16.66■□□□□ 0.26
USP38-202ENST00000510377 ZBTB1Q9Y2K1 713 aa16.66■□□□□ 0.26
USP38-202ENST00000510377 ERVV-2B6SEH9 535 aa16.66■□□□□ 0.26
USP38-202ENST00000510377 KCNJ6P48051 423 aa16.66■□□□□ 0.26
USP38-202ENST00000510377 CCT5P48643 541 aa16.66■□□□□ 0.26
USP38-202ENST00000510377 FXR1P51114 621 aaKnown RBP eCLIP16.66■□□□□ 0.26
USP38-202ENST00000510377 FAM71BQ8TC56 605 aa16.66■□□□□ 0.26
USP38-202ENST00000510377 NLRC4Q9NPP4 1024 aa16.66■□□□□ 0.26
USP38-202ENST00000510377 TRIM10Q9UDY6 481 aa16.66■□□□□ 0.26
USP38-202ENST00000510377 OPA1O60313 960 aa16.66■□□□□ 0.26
USP38-202ENST00000510377 PARP1P09874 1014 aaKnown RBP16.66■□□□□ 0.26
USP38-202ENST00000510377 CUL4BQ13620 913 aa16.66■□□□□ 0.26
USP38-202ENST00000510377 INF2Q27J81 1249 aa16.66■□□□□ 0.26
USP38-202ENST00000510377 GIGYF2Q6Y7W6 1299 aaKnown RBP16.66■□□□□ 0.26
USP38-202ENST00000510377 GOPCQ9HD26 462 aa16.66■□□□□ 0.26
USP38-202ENST00000510377 ATG3Q9NT62 314 aa16.66■□□□□ 0.26
USP38-202ENST00000510377 FBXO2Q9UK22 296 aaPredicted RBP16.66■□□□□ 0.26
USP38-202ENST00000510377 TFR2Q9UP52 801 aa16.66■□□□□ 0.26
USP38-202ENST00000510377 PTPAQ15257 358 aa16.65■□□□□ 0.26
USP38-202ENST00000510377 TMEM266Q2M3C6 531 aa16.65■□□□□ 0.26
USP38-202ENST00000510377 CFAP58Q5T655 872 aa16.65■□□□□ 0.26
USP38-202ENST00000510377 NLRP10Q86W26 655 aa16.65■□□□□ 0.26
USP38-202ENST00000510377 HAUS4Q9H6D7 363 aa16.65■□□□□ 0.26
USP38-202ENST00000510377 SASH3O75995 380 aa16.65■□□□□ 0.26
USP38-202ENST00000510377 VAV2P52735 878 aa16.65■□□□□ 0.26
USP38-202ENST00000510377 C2orf54Q08AI8 447 aa16.65■□□□□ 0.26
USP38-202ENST00000510377 KCTD16Q68DU8 428 aa16.65■□□□□ 0.26
USP38-202ENST00000510377 C8orf74Q6P047 294 aa16.65■□□□□ 0.26
USP38-202ENST00000510377 OTUD6BQ8N6M0 293 aa16.65■□□□□ 0.26
USP38-202ENST00000510377 GTPBP6O43824 516 aaPredicted RBP16.65■□□□□ 0.26
USP38-202ENST00000510377 TXKP42681 527 aa16.65■□□□□ 0.26
USP38-202ENST00000510377 MAGEA1P43355 309 aa16.65■□□□□ 0.26
USP38-202ENST00000510377 NDUFA10O95299 355 aa16.64■□□□□ 0.26
USP38-202ENST00000510377 IFFO1Q0D2I5 559 aa16.64■□□□□ 0.26
USP38-202ENST00000510377 IFIH1Q9BYX4 1025 aaKnown RBP16.64■□□□□ 0.26
USP38-202ENST00000510377 FGFR1OPO95684 399 aaKnown RBP16.64■□□□□ 0.25
USP38-202ENST00000510377 FAM182BQ5T319 152 aa16.64■□□□□ 0.25
USP38-202ENST00000510377 IGDCC4Q8TDY8 1250 aa16.64■□□□□ 0.25
USP38-202ENST00000510377 CHP1Q99653 195 aa16.64■□□□□ 0.25
USP38-202ENST00000510377 SAP30BPQ9UHR5 308 aaKnown RBP16.64■□□□□ 0.25
USP38-202ENST00000510377 BICDL2A1A5D9 508 aa16.64■□□□□ 0.25
USP38-202ENST00000510377 BUB1O43683 1085 aa16.64■□□□□ 0.25
USP38-202ENST00000510377 CCNT1O60563 726 aaKnown RBP16.64■□□□□ 0.25
USP38-202ENST00000510377 GNGT1P63211 74 aa16.64■□□□□ 0.25
USP38-202ENST00000510377 RRAGAQ7L523 313 aa16.64■□□□□ 0.25
USP38-202ENST00000510377 BCAS4Q8TDM0 211 aa16.64■□□□□ 0.25
USP38-202ENST00000510377 AGXT2Q9BYV1 514 aa16.64■□□□□ 0.25
USP38-202ENST00000510377 ZNF652Q9Y2D9 606 aa16.64■□□□□ 0.25
USP38-202ENST00000510377 MAP3K15Q6ZN16 1313 aa16.64■□□□□ 0.25
USP38-202ENST00000510377 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.64■□□□□ 0.25
USP38-202ENST00000510377 RNF26Q9BY78 433 aaPredicted RBP16.64■□□□□ 0.25
USP38-202ENST00000510377 FBXO3Q9UK99 471 aa16.64■□□□□ 0.25
USP38-202ENST00000510377 MROH5Q6ZUA9 1318 aa16.64■□□□□ 0.25
USP38-202ENST00000510377 GUCY2FP51841 1108 aa16.63■□□□□ 0.25
USP38-202ENST00000510377 RIN2Q8WYP3 895 aaPredicted RBP16.63■□□□□ 0.25
USP38-202ENST00000510377 SPAG5Q96R06 1193 aa16.63■□□□□ 0.25
USP38-202ENST00000510377 ABHD10Q9NUJ1 306 aa16.63■□□□□ 0.25
USP38-202ENST00000510377 MKRN1Q9UHC7 482 aaKnown RBP16.63■□□□□ 0.25
USP38-202ENST00000510377 DIP2AQ14689 1571 aa16.63■□□□□ 0.25
USP38-202ENST00000510377 GOLGA8HP0CJ92 632 aa16.63■□□□□ 0.25
USP38-202ENST00000510377 SLC7A5Q01650 507 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms