RNA–Protein interactions for RNA: ENST00000510030.2

SCAMP1-203, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 4

Gene SCAMP1, Length 477 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-203ENST00000510030 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.37■□□□□ 0.69
SCAMP1-203ENST00000510030 GBP4Q96PP9 640 aa19.37■□□□□ 0.69
SCAMP1-203ENST00000510030 WDR18Q9BV38 432 aa19.37■□□□□ 0.69
SCAMP1-203ENST00000510030 SEC63Q9UGP8 760 aaKnown RBP19.37■□□□□ 0.69
SCAMP1-203ENST00000510030 SCAF8Q9UPN6 1271 aaKnown RBP19.37■□□□□ 0.69
SCAMP1-203ENST00000510030 CNTNAP5Q8WYK1 1306 aa19.36■□□□□ 0.69
SCAMP1-203ENST00000510030 F5H6K3 240 aa19.36■□□□□ 0.69
SCAMP1-203ENST00000510030 ZSCAN22P10073 491 aaPredicted RBP19.36■□□□□ 0.69
SCAMP1-203ENST00000510030 MAP3K9P80192 1104 aa19.36■□□□□ 0.69
SCAMP1-203ENST00000510030 KLRC3Q07444 240 aa19.36■□□□□ 0.69
SCAMP1-203ENST00000510030 RRP1BQ14684 758 aaKnown RBP19.36■□□□□ 0.69
SCAMP1-203ENST00000510030 MAP3K11Q16584 847 aa19.36■□□□□ 0.69
SCAMP1-203ENST00000510030 NBPF11Q86T75 865 aa19.36■□□□□ 0.69
SCAMP1-203ENST00000510030 TNS4Q8IZW8 715 aa19.36■□□□□ 0.69
SCAMP1-203ENST00000510030 CCDC12Q8WUD4 166 aaPredicted RBP19.36■□□□□ 0.69
SCAMP1-203ENST00000510030 PHKBQ93100 1093 aa19.36■□□□□ 0.69
SCAMP1-203ENST00000510030 RRP36Q96EU6 259 aaKnown RBP19.36■□□□□ 0.69
SCAMP1-203ENST00000510030 ALG1Q9BT22 464 aa19.36■□□□□ 0.69
SCAMP1-203ENST00000510030 KIAA1683Q9H0B3 1180 aa19.36■□□□□ 0.69
SCAMP1-203ENST00000510030 ZSCAN16Q9H4T2 348 aaPredicted RBP19.36■□□□□ 0.69
SCAMP1-203ENST00000510030 VCPKMTQ9H867 229 aa19.36■□□□□ 0.69
SCAMP1-203ENST00000510030 PAPPA2Q9BXP8 1791 aa19.35■□□□□ 0.69
SCAMP1-203ENST00000510030 VPS37CA5D8V6 355 aaPredicted RBP19.35■□□□□ 0.69
SCAMP1-203ENST00000510030 SLURP2P0DP57 97 aa19.35■□□□□ 0.69
SCAMP1-203ENST00000510030 VEGFBP49765 207 aa19.35■□□□□ 0.69
SCAMP1-203ENST00000510030 FUT2Q10981 343 aa19.35■□□□□ 0.69
SCAMP1-203ENST00000510030 SAFBQ15424 915 aaKnown RBP eCLIP19.35■□□□□ 0.69
SCAMP1-203ENST00000510030 CLEC10AQ8IUN9 316 aa19.35■□□□□ 0.69
SCAMP1-203ENST00000510030 ANKRD13AQ8IZ07 590 aa19.35■□□□□ 0.69
SCAMP1-203ENST00000510030 SH3GLB2Q9NR46 395 aa19.35■□□□□ 0.69
SCAMP1-203ENST00000510030 C19orf81C9J6K1 198 aa19.34■□□□□ 0.69
SCAMP1-203ENST00000510030 USP17L10C9JJH3 530 aa19.34■□□□□ 0.69
SCAMP1-203ENST00000510030 PLEKHA8P1O95397 391 aa19.34■□□□□ 0.69
SCAMP1-203ENST00000510030 BMP3P12645 472 aa19.34■□□□□ 0.69
SCAMP1-203ENST00000510030 FDPSP14324 419 aaKnown RBP19.34■□□□□ 0.69
SCAMP1-203ENST00000510030 INPP5BP32019 993 aa19.34■□□□□ 0.69
SCAMP1-203ENST00000510030 USP17L2Q6R6M4 530 aa19.34■□□□□ 0.69
SCAMP1-203ENST00000510030 SIAH1Q8IUQ4 282 aa19.34■□□□□ 0.69
SCAMP1-203ENST00000510030 SRBD1Q8N5C6 995 aaKnown RBP19.34■□□□□ 0.69
SCAMP1-203ENST00000510030 CCDC148Q8NFR7 591 aa19.34■□□□□ 0.69
SCAMP1-203ENST00000510030 FBXO18Q8NFZ0 1043 aa19.34■□□□□ 0.69
SCAMP1-203ENST00000510030 BRMS1Q9HCU9 246 aa19.34■□□□□ 0.69
SCAMP1-203ENST00000510030 MTMR7Q9Y216 660 aa19.34■□□□□ 0.69
SCAMP1-203ENST00000510030 TMEM88BA6NKF7 163 aa19.33■□□□□ 0.68
SCAMP1-203ENST00000510030 TRAF5O00463 557 aa19.33■□□□□ 0.68
SCAMP1-203ENST00000510030 FOXN1O15353 648 aa19.33■□□□□ 0.68
SCAMP1-203ENST00000510030 RAD21O60216 631 aa19.33■□□□□ 0.68
SCAMP1-203ENST00000510030 PLA2G6O60733 806 aa19.33■□□□□ 0.68
SCAMP1-203ENST00000510030 USP2O75604 605 aaPredicted RBP19.33■□□□□ 0.68
SCAMP1-203ENST00000510030 NDUFB10O96000 172 aa19.33■□□□□ 0.68
SCAMP1-203ENST00000510030 SCG2P13521 617 aa19.33■□□□□ 0.68
SCAMP1-203ENST00000510030 PTPRAP18433 802 aa19.33■□□□□ 0.68
SCAMP1-203ENST00000510030 JAG1P78504 1218 aa19.33■□□□□ 0.68
SCAMP1-203ENST00000510030 TTLL12Q14166 644 aaPredicted RBP19.33■□□□□ 0.68
SCAMP1-203ENST00000510030 PRAMEF18Q5VWM3 479 aa19.33■□□□□ 0.68
SCAMP1-203ENST00000510030 ZNF280CQ8ND82 737 aa19.33■□□□□ 0.68
SCAMP1-203ENST00000510030 CHURC1Q8WUH1 139 aa19.33■□□□□ 0.68
SCAMP1-203ENST00000510030 GLIS2Q9BZE0 524 aaPredicted RBP19.33■□□□□ 0.68
SCAMP1-203ENST00000510030 RIOX1Q9H6W3 641 aa19.33■□□□□ 0.68
SCAMP1-203ENST00000510030 ISY1Q9ULR0 285 aaKnown RBP19.33■□□□□ 0.68
SCAMP1-203ENST00000510030 OTOFQ9HC10 1997 aa19.32■□□□□ 0.68
SCAMP1-203ENST00000510030 GOLGA6L22H0YM25 854 aa19.32■□□□□ 0.68
SCAMP1-203ENST00000510030 WDR46O15213 610 aaKnown RBP19.32■□□□□ 0.68
SCAMP1-203ENST00000510030 F13A1P00488 732 aa19.32■□□□□ 0.68
SCAMP1-203ENST00000510030 PTMSP20962 102 aa19.32■□□□□ 0.68
SCAMP1-203ENST00000510030 CALML3P27482 149 aa19.32■□□□□ 0.68
SCAMP1-203ENST00000510030 STAT2P52630 851 aa19.32■□□□□ 0.68
SCAMP1-203ENST00000510030 PFKFB3Q16875 520 aaPredicted RBP19.32■□□□□ 0.68
SCAMP1-203ENST00000510030 GALNT17Q6IS24 598 aa19.32■□□□□ 0.68
SCAMP1-203ENST00000510030 FAM160B2Q86V87 743 aa19.32■□□□□ 0.68
SCAMP1-203ENST00000510030 STAG2Q8N3U4 1231 aa19.32■□□□□ 0.68
SCAMP1-203ENST00000510030 CCDC82Q8N4S0 544 aa19.32■□□□□ 0.68
SCAMP1-203ENST00000510030 PNMA2Q9UL42 364 aa19.32■□□□□ 0.68
SCAMP1-203ENST00000510030 MTMR6Q9Y217 621 aa19.32■□□□□ 0.68
SCAMP1-203ENST00000510030 V9GY48 417 aaPredicted RBP19.32■□□□□ 0.68
SCAMP1-203ENST00000510030 A0A1W2PRG0 241 aa19.31■□□□□ 0.68
SCAMP1-203ENST00000510030 SHROOM1Q2M3G4 852 aaPredicted RBP19.31■□□□□ 0.68
SCAMP1-203ENST00000510030 CLEC17AQ6ZS10 378 aa19.31■□□□□ 0.68
SCAMP1-203ENST00000510030 BRAPQ7Z569 592 aa19.31■□□□□ 0.68
SCAMP1-203ENST00000510030 TEX2Q8IWB9 1127 aa19.31■□□□□ 0.68
SCAMP1-203ENST00000510030 ZKSCAN4Q969J2 545 aaPredicted RBP19.31■□□□□ 0.68
SCAMP1-203ENST00000510030 FRMPD2Q68DX3 1309 aaPredicted RBP19.3■□□□□ 0.68
SCAMP1-203ENST00000510030 GOLGA8HP0CJ92 632 aa19.3■□□□□ 0.68
SCAMP1-203ENST00000510030 FDX1P10109 184 aa19.3■□□□□ 0.68
SCAMP1-203ENST00000510030 ECE1P42892 770 aa19.3■□□□□ 0.68
SCAMP1-203ENST00000510030 BACE1P56817 501 aa19.3■□□□□ 0.68
SCAMP1-203ENST00000510030 PPATQ06203 517 aa19.3■□□□□ 0.68
SCAMP1-203ENST00000510030 IKQ13123 557 aaPredicted RBP19.3■□□□□ 0.68
SCAMP1-203ENST00000510030 GNL2Q13823 731 aaKnown RBP19.3■□□□□ 0.68
SCAMP1-203ENST00000510030 VGLL4Q14135 290 aa19.3■□□□□ 0.68
SCAMP1-203ENST00000510030 ATL3Q6DD88 541 aa19.3■□□□□ 0.68
SCAMP1-203ENST00000510030 PPP1R18Q6NYC8 613 aa19.3■□□□□ 0.68
SCAMP1-203ENST00000510030 BTNL9Q6UXG8 535 aa19.3■□□□□ 0.68
SCAMP1-203ENST00000510030 ERO1BQ86YB8 467 aa19.3■□□□□ 0.68
SCAMP1-203ENST00000510030 CMTR1Q8N1G2 835 aaKnown RBP19.3■□□□□ 0.68
SCAMP1-203ENST00000510030 ACER1Q8TDN7 264 aa19.3■□□□□ 0.68
SCAMP1-203ENST00000510030 TNPO1Q92973 898 aaKnown RBP19.3■□□□□ 0.68
SCAMP1-203ENST00000510030 GPCPD1Q9NPB8 672 aa19.3■□□□□ 0.68
SCAMP1-203ENST00000510030 FEM1BQ9UK73 627 aa19.3■□□□□ 0.68
SCAMP1-203ENST00000510030 CSPP1Q1MSJ5 1256 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms