RNA–Protein interactions for RNA: ENST00000509978.1

SPOCK1-207, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 4

Gene SPOCK1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-207ENST00000509978 PRODHO43272 600 aa11.05□□□□□ -0.64
SPOCK1-207ENST00000509978 RNGTTO60942 597 aaKnown RBP11.05□□□□□ -0.64
SPOCK1-207ENST00000509978 LYPD4Q6UWN0 246 aa11.05□□□□□ -0.64
SPOCK1-207ENST00000509978 LRRTM3Q86VH5 581 aa11.05□□□□□ -0.64
SPOCK1-207ENST00000509978 FBXL18Q96ME1 805 aa11.05□□□□□ -0.64
SPOCK1-207ENST00000509978 MKRN2Q9H000 416 aaKnown RBP11.05□□□□□ -0.64
SPOCK1-207ENST00000509978 SSU72Q9NP77 194 aaKnown RBP11.05□□□□□ -0.64
SPOCK1-207ENST00000509978 ACTL7BQ9Y614 415 aa11.05□□□□□ -0.64
SPOCK1-207ENST00000509978 POU3F2P20265 443 aaPredicted RBP11.04□□□□□ -0.64
SPOCK1-207ENST00000509978 GRIA2P42262 883 aa11.04□□□□□ -0.64
SPOCK1-207ENST00000509978 HSP90AB2PQ58FF8 381 aa11.04□□□□□ -0.64
SPOCK1-207ENST00000509978 TRIM59Q8IWR1 403 aa11.04□□□□□ -0.64
SPOCK1-207ENST00000509978 AFAP1L2Q8N4X5 818 aa11.04□□□□□ -0.64
SPOCK1-207ENST00000509978 DDX1Q92499 740 aaKnown RBP11.04□□□□□ -0.64
SPOCK1-207ENST00000509978 PPP1R14AQ96A00 147 aa11.04□□□□□ -0.64
SPOCK1-207ENST00000509978 ZNF512BQ96KM6 892 aaPredicted RBP11.04□□□□□ -0.64
SPOCK1-207ENST00000509978 CCDC140Q96MF4 163 aa11.04□□□□□ -0.64
SPOCK1-207ENST00000509978 KREMEN1Q96MU8 473 aa11.04□□□□□ -0.64
SPOCK1-207ENST00000509978 TARS2Q9BW92 718 aaKnown RBP11.04□□□□□ -0.64
SPOCK1-207ENST00000509978 CHMP4AQ9BY43 222 aa11.04□□□□□ -0.64
SPOCK1-207ENST00000509978 GP6Q9HCN6 339 aa11.04□□□□□ -0.64
SPOCK1-207ENST00000509978 FAM105AQ9NUU6 356 aa11.04□□□□□ -0.64
SPOCK1-207ENST00000509978 PRR13Q9NZ81 148 aa11.04□□□□□ -0.64
SPOCK1-207ENST00000509978 SUGT1Q9Y2Z0 365 aa11.04□□□□□ -0.64
SPOCK1-207ENST00000509978 KRBA1A5PL33 1030 aa11.03□□□□□ -0.64
SPOCK1-207ENST00000509978 NPTXRO95502 500 aa11.03□□□□□ -0.64
SPOCK1-207ENST00000509978 C6orf222P0C671 652 aaPredicted RBP11.03□□□□□ -0.64
SPOCK1-207ENST00000509978 ITGA4P13612 1032 aa11.03□□□□□ -0.64
SPOCK1-207ENST00000509978 SDSP20132 328 aa11.03□□□□□ -0.64
SPOCK1-207ENST00000509978 ODR4Q5SWX8 454 aa11.03□□□□□ -0.64
SPOCK1-207ENST00000509978 FDX2Q6P4F2 183 aa11.03□□□□□ -0.64
SPOCK1-207ENST00000509978 AHI1Q8N157 1196 aa11.03□□□□□ -0.64
SPOCK1-207ENST00000509978 PPM1KQ8N3J5 372 aa11.03□□□□□ -0.64
SPOCK1-207ENST00000509978 ASPNQ9BXN1 380 aa11.03□□□□□ -0.64
SPOCK1-207ENST00000509978 TRIM39Q9HCM9 518 aa11.03□□□□□ -0.64
SPOCK1-207ENST00000509978 AKT3Q9Y243 479 aa11.03□□□□□ -0.64
SPOCK1-207ENST00000509978 EFCAB14O75071 495 aa11.02□□□□□ -0.65
SPOCK1-207ENST00000509978 ELNP15502 786 aa11.02□□□□□ -0.65
SPOCK1-207ENST00000509978 GABREP78334 506 aa11.02□□□□□ -0.65
SPOCK1-207ENST00000509978 BRDTQ58F21 947 aaPredicted RBP11.02□□□□□ -0.65
SPOCK1-207ENST00000509978 GSTCDQ8NEC7 633 aa11.02□□□□□ -0.65
SPOCK1-207ENST00000509978 TRIM11Q96F44 468 aa11.02□□□□□ -0.65
SPOCK1-207ENST00000509978 ACSS3Q9H6R3 686 aa11.02□□□□□ -0.65
SPOCK1-207ENST00000509978 SFMBT1Q9UHJ3 866 aa11.02□□□□□ -0.65
SPOCK1-207ENST00000509978 G3BP2Q9UN86 482 aaKnown RBP11.02□□□□□ -0.65
SPOCK1-207ENST00000509978 DIS3Q9Y2L1 958 aaKnown RBP11.02□□□□□ -0.65
SPOCK1-207ENST00000509978 FAN1Q9Y2M0 1017 aa11.02□□□□□ -0.65
SPOCK1-207ENST00000509978 LINC00114Q6XXX2 140 aa11.01□□□□□ -0.65
SPOCK1-207ENST00000509978 XAGE3Q8WTP9 111 aa11.01□□□□□ -0.65
SPOCK1-207ENST00000509978 RNF141Q8WVD5 230 aa11.01□□□□□ -0.65
SPOCK1-207ENST00000509978 JDP2Q8WYK2 163 aa11.01□□□□□ -0.65
SPOCK1-207ENST00000509978 FHOD1Q9Y613 1164 aa11.01□□□□□ -0.65
SPOCK1-207ENST00000509978 THOC2Q8NI27 1593 aaKnown RBP11.01□□□□□ -0.65
SPOCK1-207ENST00000509978 TBX1O43435 398 aa11□□□□□ -0.65
SPOCK1-207ENST00000509978 DNAJC8O75937 253 aaPredicted RBP11□□□□□ -0.65
SPOCK1-207ENST00000509978 CPEP16870 476 aa11□□□□□ -0.65
SPOCK1-207ENST00000509978 ETV3P41162 512 aa11□□□□□ -0.65
SPOCK1-207ENST00000509978 EVA1CP58658 441 aa11□□□□□ -0.65
SPOCK1-207ENST00000509978 TRIM28Q13263 835 aaKnown RBP11□□□□□ -0.65
SPOCK1-207ENST00000509978 LETMD1Q6P1Q0 360 aa11□□□□□ -0.65
SPOCK1-207ENST00000509978 DDX46Q7L014 1031 aaKnown RBP11□□□□□ -0.65
SPOCK1-207ENST00000509978 UBR7Q8N806 425 aa11□□□□□ -0.65
SPOCK1-207ENST00000509978 SYTL5Q8TDW5 730 aaPredicted RBP11□□□□□ -0.65
SPOCK1-207ENST00000509978 LGR4Q9BXB1 951 aa11□□□□□ -0.65
SPOCK1-207ENST00000509978 FAM83GA6ND36 823 aa10.99□□□□□ -0.65
SPOCK1-207ENST00000509978 F8W735 103 aaPredicted RBP10.99□□□□□ -0.65
SPOCK1-207ENST00000509978 DLX3O60479 287 aa10.99□□□□□ -0.65
SPOCK1-207ENST00000509978 EYA4O95677 639 aa10.99□□□□□ -0.65
SPOCK1-207ENST00000509978 HOXC12P31275 282 aa10.99□□□□□ -0.65
SPOCK1-207ENST00000509978 MAP4K2Q12851 820 aa10.99□□□□□ -0.65
SPOCK1-207ENST00000509978 GRB10Q13322 594 aa10.99□□□□□ -0.65
SPOCK1-207ENST00000509978 NBPF9Q3BBW0 867 aa10.99□□□□□ -0.65
SPOCK1-207ENST00000509978 CNNM4Q6P4Q7 775 aa10.99□□□□□ -0.65
SPOCK1-207ENST00000509978 SLC7A14Q8TBB6 771 aa10.99□□□□□ -0.65
SPOCK1-207ENST00000509978 PSMG3-AS1Q96PY0 264 aa10.99□□□□□ -0.65
SPOCK1-207ENST00000509978 PLVAPQ9BX97 442 aa10.99□□□□□ -0.65
SPOCK1-207ENST00000509978 ENAMQ9NRM1 1142 aa10.99□□□□□ -0.65
SPOCK1-207ENST00000509978 CGGBP1Q9UFW8 167 aaPredicted RBP10.99□□□□□ -0.65
SPOCK1-207ENST00000509978 PCDHB12Q9Y5F1 795 aa10.99□□□□□ -0.65
SPOCK1-207ENST00000509978 PIK3R2O00459 728 aa10.98□□□□□ -0.65
SPOCK1-207ENST00000509978 ZNF445P59923 1031 aa10.98□□□□□ -0.65
SPOCK1-207ENST00000509978 WWC2Q6AWC2 1192 aa10.98□□□□□ -0.65
SPOCK1-207ENST00000509978 KCTD13Q8WZ19 329 aa10.98□□□□□ -0.65
SPOCK1-207ENST00000509978 PTPRN2Q92932 1015 aa10.98□□□□□ -0.65
SPOCK1-207ENST00000509978 RRAGCQ9HB90 399 aa10.98□□□□□ -0.65
SPOCK1-207ENST00000509978 THRAP3Q9Y2W1 955 aaKnown RBP10.98□□□□□ -0.65
SPOCK1-207ENST00000509978 WASHC2CQ9Y4E1 1318 aa10.98□□□□□ -0.65
SPOCK1-207ENST00000509978 SLITRK5O94991 958 aa10.97□□□□□ -0.65
SPOCK1-207ENST00000509978 ASLP04424 464 aa10.97□□□□□ -0.65
SPOCK1-207ENST00000509978 SCG5P05408 212 aa10.97□□□□□ -0.65
SPOCK1-207ENST00000509978 GFRA1P56159 465 aa10.97□□□□□ -0.65
SPOCK1-207ENST00000509978 GTF2IRD2BQ6EKJ0 949 aa10.97□□□□□ -0.65
SPOCK1-207ENST00000509978 GTF2IRD2Q86UP8 949 aa10.97□□□□□ -0.65
SPOCK1-207ENST00000509978 RIN3Q8TB24 985 aa10.97□□□□□ -0.65
SPOCK1-207ENST00000509978 BTN2A2Q8WVV5 523 aa10.97□□□□□ -0.65
SPOCK1-207ENST00000509978 NKX2-4Q9H2Z4 354 aa10.97□□□□□ -0.65
SPOCK1-207ENST00000509978 SLC52A2Q9HAB3 445 aa10.97□□□□□ -0.65
SPOCK1-207ENST00000509978 NESP48681 1621 aa10.97□□□□□ -0.65
SPOCK1-207ENST00000509978 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.96□□□□□ -0.65
SPOCK1-207ENST00000509978 DHCR24Q15392 516 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms