RNA–Protein interactions for RNA: ENST00000509912.5

NEK1-204, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 2,971 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-204ENST00000509912 SH2B1Q9NRF2 756 aaPredicted RBP6.48□□□□□ -1.37
NEK1-204ENST00000509912 DACH1Q9UI36 760 aa6.48□□□□□ -1.37
NEK1-204ENST00000509912 PNPLA7Q6ZV29 1317 aa6.48□□□□□ -1.37
NEK1-204ENST00000509912 LAMB2P55268 1798 aa6.48□□□□□ -1.37
NEK1-204ENST00000509912 A0A087WZG4 1122 aa6.48□□□□□ -1.37
NEK1-204ENST00000509912 EGFRP00533 1210 aa6.48□□□□□ -1.37
NEK1-204ENST00000509912 EIF2AK2P19525 551 aaKnown RBP6.48□□□□□ -1.37
NEK1-204ENST00000509912 LMNB1P20700 586 aa6.48□□□□□ -1.37
NEK1-204ENST00000509912 MTERF2Q49AM1 385 aa6.48□□□□□ -1.37
NEK1-204ENST00000509912 RNF187Q5TA31 235 aaPredicted RBP6.48□□□□□ -1.37
NEK1-204ENST00000509912 SIN3AQ96ST3 1273 aa6.48□□□□□ -1.37
NEK1-204ENST00000509912 GABBR1Q9UBS5 961 aa6.48□□□□□ -1.37
NEK1-204ENST00000509912 ST8SIA5O15466 376 aa6.47□□□□□ -1.37
NEK1-204ENST00000509912 MAN1A2O60476 641 aa6.47□□□□□ -1.37
NEK1-204ENST00000509912 CPB1P15086 417 aa6.47□□□□□ -1.37
NEK1-204ENST00000509912 NEUROD1Q13562 356 aa6.47□□□□□ -1.37
NEK1-204ENST00000509912 PLEKHO1Q53GL0 409 aaPredicted RBP6.47□□□□□ -1.37
NEK1-204ENST00000509912 EFHC2Q5JST6 749 aa6.47□□□□□ -1.37
NEK1-204ENST00000509912 MIR1-1HGQ9H1L0 117 aa6.47□□□□□ -1.37
NEK1-204ENST00000509912 ZNF576Q9H609 170 aa6.47□□□□□ -1.37
NEK1-204ENST00000509912 NOP58Q9Y2X3 529 aaKnown RBP6.47□□□□□ -1.37
NEK1-204ENST00000509912 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.47□□□□□ -1.37
NEK1-204ENST00000509912 EIF6P56537 245 aaKnown RBP6.47□□□□□ -1.37
NEK1-204ENST00000509912 DBN1Q16643 649 aa6.47□□□□□ -1.37
NEK1-204ENST00000509912 ZNF423Q2M1K9 1284 aa6.47□□□□□ -1.37
NEK1-204ENST00000509912 REC114Q7Z4M0 266 aa6.47□□□□□ -1.37
NEK1-204ENST00000509912 SLC12A5Q9H2X9 1139 aa6.47□□□□□ -1.37
NEK1-204ENST00000509912 CRISPLD1Q9H336 500 aa6.47□□□□□ -1.37
NEK1-204ENST00000509912 POLKQ9UBT6 870 aa6.47□□□□□ -1.37
NEK1-204ENST00000509912 NAGPAQ9UK23 515 aa6.47□□□□□ -1.37
NEK1-204ENST00000509912 TRIM33Q9UPN9 1127 aa6.47□□□□□ -1.37
NEK1-204ENST00000509912 PHKG2P15735 406 aa6.46□□□□□ -1.37
NEK1-204ENST00000509912 PWP1Q13610 501 aa6.46□□□□□ -1.37
NEK1-204ENST00000509912 UBAP2LQ14157 1087 aaKnown RBP6.46□□□□□ -1.37
NEK1-204ENST00000509912 GPR162Q16538 588 aa6.46□□□□□ -1.37
NEK1-204ENST00000509912 AKAP4Q5JQC9 854 aa6.46□□□□□ -1.37
NEK1-204ENST00000509912 LSRQ86X29 649 aaPredicted RBP6.46□□□□□ -1.37
NEK1-204ENST00000509912 SLC7A3Q8WY07 619 aa6.46□□□□□ -1.37
NEK1-204ENST00000509912 NXPE3Q969Y0 559 aa6.46□□□□□ -1.37
NEK1-204ENST00000509912 GTPBP3Q969Y2 492 aaKnown RBP6.46□□□□□ -1.37
NEK1-204ENST00000509912 PNNQ9H307 717 aaKnown RBP6.46□□□□□ -1.37
NEK1-204ENST00000509912 LRRC37AA6NMS7 1700 aa6.46□□□□□ -1.37
NEK1-204ENST00000509912 DDX60Q8IY21 1712 aaKnown RBP6.46□□□□□ -1.37
NEK1-204ENST00000509912 ANKRD36CQ5JPF3 1778 aa6.46□□□□□ -1.38
NEK1-204ENST00000509912 ADAMTSL1Q8N6G6 1762 aa6.46□□□□□ -1.38
NEK1-204ENST00000509912 FAM221AA4D161 298 aa6.46□□□□□ -1.38
NEK1-204ENST00000509912 KLRG2A4D1S0 409 aaPredicted RBP6.46□□□□□ -1.38
NEK1-204ENST00000509912 IRS4O14654 1257 aaPredicted RBP6.46□□□□□ -1.38
NEK1-204ENST00000509912 EFSO43281 561 aa6.46□□□□□ -1.38
NEK1-204ENST00000509912 IL13P35225 146 aa6.46□□□□□ -1.38
NEK1-204ENST00000509912 C1QTNF8P60827 252 aa6.46□□□□□ -1.38
NEK1-204ENST00000509912 SOGA3Q5TF21 947 aa6.46□□□□□ -1.38
NEK1-204ENST00000509912 CRBNQ96SW2 442 aa6.46□□□□□ -1.38
NEK1-204ENST00000509912 LRRC4BQ9NT99 713 aa6.46□□□□□ -1.38
NEK1-204ENST00000509912 PCDHB14Q9Y5E9 798 aa6.46□□□□□ -1.38
NEK1-204ENST00000509912 DNAJA2O60884 412 aa6.45□□□□□ -1.38
NEK1-204ENST00000509912 RPS6KA4O75676 772 aa6.45□□□□□ -1.38
NEK1-204ENST00000509912 IBSPP21815 317 aaPredicted RBP6.45□□□□□ -1.38
NEK1-204ENST00000509912 GDF6Q6KF10 455 aaPredicted RBP6.45□□□□□ -1.38
NEK1-204ENST00000509912 ACTR10Q9NZ32 417 aa6.45□□□□□ -1.38
NEK1-204ENST00000509912 PDE2AO00408 941 aaPredicted RBP6.45□□□□□ -1.38
NEK1-204ENST00000509912 PDPK1O15530 556 aa6.45□□□□□ -1.38
NEK1-204ENST00000509912 POLR2BP30876 1174 aaKnown RBP6.45□□□□□ -1.38
NEK1-204ENST00000509912 LMNB2Q03252 620 aa6.45□□□□□ -1.38
NEK1-204ENST00000509912 TNP2Q05952 138 aa6.45□□□□□ -1.38
NEK1-204ENST00000509912 DDX54Q8TDD1 881 aaKnown RBP6.45□□□□□ -1.38
NEK1-204ENST00000509912 GATAD2BQ8WXI9 593 aa6.45□□□□□ -1.38
NEK1-204ENST00000509912 GAL3ST3Q96A11 431 aa6.45□□□□□ -1.38
NEK1-204ENST00000509912 TLR7Q9NYK1 1049 aaKnown RBP6.45□□□□□ -1.38
NEK1-204ENST00000509912 SIRPGQ9P1W8 387 aa6.45□□□□□ -1.38
NEK1-204ENST00000509912 POLR3KQ9Y2Y1 108 aaPredicted RBP6.45□□□□□ -1.38
NEK1-204ENST00000509912 CSADQ9Y600 493 aa6.45□□□□□ -1.38
NEK1-204ENST00000509912 ATP10DQ9P241 1426 aa6.45□□□□□ -1.38
NEK1-204ENST00000509912 PALLDQ8WX93 1383 aa6.45□□□□□ -1.38
NEK1-204ENST00000509912 KDM2BQ8NHM5 1336 aa6.45□□□□□ -1.38
NEK1-204ENST00000509912 CTBSQ01459 385 aa6.45□□□□□ -1.38
NEK1-204ENST00000509912 PTSQ03393 145 aa6.45□□□□□ -1.38
NEK1-204ENST00000509912 NGEFQ8N5V2 710 aa6.45□□□□□ -1.38
NEK1-204ENST00000509912 RAPGEF4Q8WZA2 1011 aa6.45□□□□□ -1.38
NEK1-204ENST00000509912 LTV1Q96GA3 475 aaPredicted RBP6.45□□□□□ -1.38
NEK1-204ENST00000509912 SPC25Q9HBM1 224 aa6.45□□□□□ -1.38
NEK1-204ENST00000509912 DYRK1BQ9Y463 629 aa6.45□□□□□ -1.38
NEK1-204ENST00000509912 DNAJC6O75061 913 aa6.44□□□□□ -1.38
NEK1-204ENST00000509912 ASMTLO95671 621 aa6.44□□□□□ -1.38
NEK1-204ENST00000509912 BMP6P22004 513 aa6.44□□□□□ -1.38
NEK1-204ENST00000509912 SLITRK4Q8IW52 837 aa6.44□□□□□ -1.38
NEK1-204ENST00000509912 PNISRQ8TF01 805 aaKnown RBP6.44□□□□□ -1.38
NEK1-204ENST00000509912 TFCP2L1Q9NZI6 479 aa6.44□□□□□ -1.38
NEK1-204ENST00000509912 SCN4AP35499 1836 aa6.44□□□□□ -1.38
NEK1-204ENST00000509912 PEX14O75381 377 aa6.44□□□□□ -1.38
NEK1-204ENST00000509912 SELPP16109 830 aa6.44□□□□□ -1.38
NEK1-204ENST00000509912 ITPKAP23677 461 aa6.44□□□□□ -1.38
NEK1-204ENST00000509912 AMPHP49418 695 aa6.44□□□□□ -1.38
NEK1-204ENST00000509912 NBPF6Q5VWK0 638 aa6.44□□□□□ -1.38
NEK1-204ENST00000509912 NBPF4Q96M43 638 aa6.44□□□□□ -1.38
NEK1-204ENST00000509912 TMEM39AQ9NV64 488 aa6.44□□□□□ -1.38
NEK1-204ENST00000509912 FER1L6Q2WGJ9 1857 aa6.43□□□□□ -1.38
NEK1-204ENST00000509912 INPP5AQ14642 412 aa6.43□□□□□ -1.38
NEK1-204ENST00000509912 CWF19L2Q2TBE0 894 aaKnown RBP6.43□□□□□ -1.38
NEK1-204ENST00000509912 YOD1Q5VVQ6 348 aaPredicted RBP6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms