RNA–Protein interactions for RNA: ENST00000509900.5

PTPN20-223, Transcript of protein tyrosine phosphatase, non-receptor type 20, human

TSL 1 (best) BASIC

Gene PTPN20, Length 693 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN20-223	ENST00000509900		A0A1W2PQY0	241 aa		12.03	□□□□□ -0.48
PTPN20-223	ENST00000509900	RFXAP	O00287	272 aa		12.03	□□□□□ -0.48
PTPN20-223	ENST00000509900	LDHB	P07195	334 aa	Known RBP	12.03	□□□□□ -0.48
PTPN20-223	ENST00000509900	CSF2RA	P15509	400 aa		12.03	□□□□□ -0.48
PTPN20-223	ENST00000509900	METTL24	Q5JXM2	366 aa		12.03	□□□□□ -0.48
PTPN20-223	ENST00000509900	WDR78	Q5VTH9	848 aa		12.03	□□□□□ -0.48
PTPN20-223	ENST00000509900	KRT40	Q6A162	431 aa		12.03	□□□□□ -0.48
PTPN20-223	ENST00000509900	GTF3C2	Q8WUA4	911 aa	Predicted RBP	12.03	□□□□□ -0.48
PTPN20-223	ENST00000509900	ANKS1A	Q92625	1134 aa		12.03	□□□□□ -0.48
PTPN20-223	ENST00000509900	TOX2	Q96NM4	488 aa		12.03	□□□□□ -0.48
PTPN20-223	ENST00000509900	AS3MT	Q9HBK9	375 aa		12.03	□□□□□ -0.48
PTPN20-223	ENST00000509900	PTPRZ1	P23471	2315 aa	Predicted RBP	12.03	□□□□□ -0.48
PTPN20-223	ENST00000509900	SPDYE16	A6NNV3	312 aa	Predicted RBP	12.02	□□□□□ -0.49
PTPN20-223	ENST00000509900	MYOG	P15173	224 aa		12.02	□□□□□ -0.49
PTPN20-223	ENST00000509900	FGFR2	P21802	821 aa		12.02	□□□□□ -0.49
PTPN20-223	ENST00000509900	RABGGTB	P53611	331 aa		12.02	□□□□□ -0.49
PTPN20-223	ENST00000509900	JAG1	P78504	1218 aa		12.02	□□□□□ -0.49
PTPN20-223	ENST00000509900	FKBP5	Q13451	457 aa	Predicted RBP	12.02	□□□□□ -0.49
PTPN20-223	ENST00000509900	PRAMEF19	Q5SWL8	479 aa		12.02	□□□□□ -0.49
PTPN20-223	ENST00000509900	PPP2R2D	Q66LE6	453 aa		12.02	□□□□□ -0.49
PTPN20-223	ENST00000509900	OLFML2B	Q68BL8	750 aa		12.02	□□□□□ -0.49
PTPN20-223	ENST00000509900	CCDC174	Q6PII3	467 aa		12.02	□□□□□ -0.49
PTPN20-223	ENST00000509900	NYAP1	Q6ZVC0	841 aa		12.02	□□□□□ -0.49
PTPN20-223	ENST00000509900	HLA-C	Q95604	372 aa		12.02	□□□□□ -0.49
PTPN20-223	ENST00000509900	RABGAP1	Q9Y3P9	1069 aa		12.02	□□□□□ -0.49
PTPN20-223	ENST00000509900	CACNA1G	O43497	2377 aa		12.02	□□□□□ -0.49
PTPN20-223	ENST00000509900	COL4A4	P53420	1690 aa	Predicted RBP	12.02	□□□□□ -0.49
PTPN20-223	ENST00000509900	ZNF521	Q96K83	1311 aa		12.02	□□□□□ -0.49
PTPN20-223	ENST00000509900	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	12.01	□□□□□ -0.49
PTPN20-223	ENST00000509900	DCDC2C	A8MYV0	355 aa		12.01	□□□□□ -0.49
PTPN20-223	ENST00000509900	GRM8	O00222	908 aa		12.01	□□□□□ -0.49
PTPN20-223	ENST00000509900	CCNA1	P78396	465 aa		12.01	□□□□□ -0.49
PTPN20-223	ENST00000509900	CSPP1	Q1MSJ5	1256 aa		12.01	□□□□□ -0.49
PTPN20-223	ENST00000509900	BEND3	Q5T5X7	828 aa		12.01	□□□□□ -0.49
PTPN20-223	ENST00000509900	PSRC1	Q6PGN9	363 aa	Predicted RBP	12.01	□□□□□ -0.49
PTPN20-223	ENST00000509900	KAZALD1	Q96I82	304 aa		12.01	□□□□□ -0.49
PTPN20-223	ENST00000509900	PCGF6	Q9BYE7	350 aa		12.01	□□□□□ -0.49
PTPN20-223	ENST00000509900	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	12.01	□□□□□ -0.49
PTPN20-223	ENST00000509900	IVNS1ABP	Q9Y6Y0	642 aa		12.01	□□□□□ -0.49
PTPN20-223	ENST00000509900	C19orf81	C9J6K1	198 aa		12	□□□□□ -0.49
PTPN20-223	ENST00000509900	IFIT1	P09914	478 aa	Known RBP	12	□□□□□ -0.49
PTPN20-223	ENST00000509900	SLC5A1	P13866	664 aa		12	□□□□□ -0.49
PTPN20-223	ENST00000509900	SHROOM1	Q2M3G4	852 aa	Predicted RBP	12	□□□□□ -0.49
PTPN20-223	ENST00000509900	PACS2	Q86VP3	889 aa		12	□□□□□ -0.49
PTPN20-223	ENST00000509900	GJD3	Q8N144	294 aa		12	□□□□□ -0.49
PTPN20-223	ENST00000509900	IRX2	Q9BZI1	471 aa	Predicted RBP	12	□□□□□ -0.49
PTPN20-223	ENST00000509900	SALL1	Q9NSC2	1324 aa		12	□□□□□ -0.49
PTPN20-223	ENST00000509900	DCHS1	Q96JQ0	3298 aa		11.99	□□□□□ -0.49
PTPN20-223	ENST00000509900	EPOP	A6NHQ4	379 aa		11.99	□□□□□ -0.49
PTPN20-223	ENST00000509900		F6X3S4	739 aa		11.99	□□□□□ -0.49
PTPN20-223	ENST00000509900	PGK1	P00558	417 aa		11.99	□□□□□ -0.49
PTPN20-223	ENST00000509900	ALAD	P13716	330 aa		11.99	□□□□□ -0.49
PTPN20-223	ENST00000509900	PUM3	Q15397	648 aa	Known RBP	11.99	□□□□□ -0.49
PTPN20-223	ENST00000509900	E2F4	Q16254	413 aa		11.99	□□□□□ -0.49
PTPN20-223	ENST00000509900	FAM178B	Q8IXR5	827 aa		11.99	□□□□□ -0.49
PTPN20-223	ENST00000509900	XPNPEP3	Q9NQH7	507 aa		11.99	□□□□□ -0.49
PTPN20-223	ENST00000509900	BTBD7	Q9P203	1132 aa		11.99	□□□□□ -0.49
PTPN20-223	ENST00000509900	CACNA1H	O95180	2353 aa		11.98	□□□□□ -0.49
PTPN20-223	ENST00000509900	USP17L10	C9JJH3	530 aa		11.98	□□□□□ -0.49
PTPN20-223	ENST00000509900	ADORA2A	P29274	412 aa		11.98	□□□□□ -0.49
PTPN20-223	ENST00000509900	BTD	P43251	543 aa		11.98	□□□□□ -0.49
PTPN20-223	ENST00000509900	RHBDL3	P58872	404 aa		11.98	□□□□□ -0.49
PTPN20-223	ENST00000509900	DPP9	Q86TI2	863 aa		11.98	□□□□□ -0.49
PTPN20-223	ENST00000509900	TMEM199	Q8N511	208 aa		11.98	□□□□□ -0.49
PTPN20-223	ENST00000509900	SUCLG2	Q96I99	432 aa		11.98	□□□□□ -0.49
PTPN20-223	ENST00000509900	IL23A	Q9NPF7	189 aa		11.98	□□□□□ -0.49
PTPN20-223	ENST00000509900	WDR70	Q9NW82	654 aa		11.98	□□□□□ -0.49
PTPN20-223	ENST00000509900	TSR3	Q9UJK0	312 aa	Known RBP	11.98	□□□□□ -0.49
PTPN20-223	ENST00000509900	TECTA	O75443	2155 aa		11.98	□□□□□ -0.49
PTPN20-223	ENST00000509900	COBL	O75128	1261 aa		11.97	□□□□□ -0.49
PTPN20-223	ENST00000509900	ASNS	P08243	561 aa		11.97	□□□□□ -0.49
PTPN20-223	ENST00000509900	CALD1	Q05682	793 aa	Known RBP	11.97	□□□□□ -0.49
PTPN20-223	ENST00000509900	RNF180	Q86T96	592 aa		11.97	□□□□□ -0.49
PTPN20-223	ENST00000509900	TSR2	Q969E8	191 aa	Known RBP	11.97	□□□□□ -0.49
PTPN20-223	ENST00000509900	PPP1R12C	Q9BZL4	782 aa		11.97	□□□□□ -0.49
PTPN20-223	ENST00000509900	STARD7	Q9NQZ5	370 aa		11.97	□□□□□ -0.49
PTPN20-223	ENST00000509900	PCDHA11	Q9Y5I1	949 aa		11.97	□□□□□ -0.49
PTPN20-223	ENST00000509900	FOCAD	Q5VW36	1801 aa		11.97	□□□□□ -0.49
PTPN20-223	ENST00000509900	RIF1	Q5UIP0	2472 aa	Known RBP	11.96	□□□□□ -0.49
PTPN20-223	ENST00000509900	PLXNA3	P51805	1871 aa		11.96	□□□□□ -0.49
PTPN20-223	ENST00000509900	GRXCR2	A6NFK2	248 aa		11.96	□□□□□ -0.49
PTPN20-223	ENST00000509900	APBB1	O00213	710 aa		11.96	□□□□□ -0.49
PTPN20-223	ENST00000509900	RARB	P10826	455 aa		11.96	□□□□□ -0.49
PTPN20-223	ENST00000509900	TWISTNB	Q3B726	338 aa	Predicted RBP	11.96	□□□□□ -0.49
PTPN20-223	ENST00000509900	HFE2	Q6ZVN8	426 aa		11.96	□□□□□ -0.49
PTPN20-223	ENST00000509900	OTOP2	Q7RTS6	562 aa		11.96	□□□□□ -0.49
PTPN20-223	ENST00000509900	PRSS33	Q8NF86	280 aa		11.96	□□□□□ -0.49
PTPN20-223	ENST00000509900	KLHDC4	Q8TBB5	520 aa		11.96	□□□□□ -0.49
PTPN20-223	ENST00000509900	MTIF3	Q9H2K0	278 aa	Known RBP	11.96	□□□□□ -0.49
PTPN20-223	ENST00000509900	CERS4	Q9HA82	394 aa		11.96	□□□□□ -0.49
PTPN20-223	ENST00000509900	HERC5	Q9UII4	1024 aa	Known RBP	11.96	□□□□□ -0.49
PTPN20-223	ENST00000509900	ADAMTS8	Q9UP79	889 aa		11.96	□□□□□ -0.49
PTPN20-223	ENST00000509900	FAM186A	A6NE01	2351 aa		11.96	□□□□□ -0.5
PTPN20-223	ENST00000509900	KMT2E	Q8IZD2	1858 aa		11.95	□□□□□ -0.5
PTPN20-223	ENST00000509900	MROH7-TTC4	A0A0A0MT08	1334 aa		11.95	□□□□□ -0.5
PTPN20-223	ENST00000509900	SCN5A	Q14524	2016 aa		11.95	□□□□□ -0.5
PTPN20-223	ENST00000509900	DCX	O43602	365 aa		11.95	□□□□□ -0.5
PTPN20-223	ENST00000509900	ADAMTS4	O75173	837 aa		11.95	□□□□□ -0.5
PTPN20-223	ENST00000509900	FGB	P02675	491 aa		11.95	□□□□□ -0.5
PTPN20-223	ENST00000509900	SSTR3	P32745	418 aa	Predicted RBP	11.95	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms