RNA–Protein interactions for RNA: ENST00000509293.1

SPOCK1-206, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 4

Gene SPOCK1, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-206ENST00000509293 TMTC3Q6ZXV5 915 aa16.67■□□□□ 0.26
SPOCK1-206ENST00000509293 CCDC83Q8IWF9 413 aa16.67■□□□□ 0.26
SPOCK1-206ENST00000509293 NECAB1Q8N987 351 aa16.67■□□□□ 0.26
SPOCK1-206ENST00000509293 OPTNQ96CV9 577 aa16.67■□□□□ 0.26
SPOCK1-206ENST00000509293 NCOA5Q9HCD5 579 aaKnown RBP16.67■□□□□ 0.26
SPOCK1-206ENST00000509293 TLL2Q9Y6L7 1015 aa16.67■□□□□ 0.26
SPOCK1-206ENST00000509293 TRIM75PA6NK02 468 aa16.66■□□□□ 0.26
SPOCK1-206ENST00000509293 KLRF2D3W0D1 207 aa16.66■□□□□ 0.26
SPOCK1-206ENST00000509293 IRF6O14896 467 aa16.66■□□□□ 0.26
SPOCK1-206ENST00000509293 BMP3P12645 472 aa16.66■□□□□ 0.26
SPOCK1-206ENST00000509293 RXRAP19793 462 aa16.66■□□□□ 0.26
SPOCK1-206ENST00000509293 FUT2Q10981 343 aa16.66■□□□□ 0.26
SPOCK1-206ENST00000509293 BTNL9Q6UXG8 535 aa16.66■□□□□ 0.26
SPOCK1-206ENST00000509293 OTUD5Q96G74 571 aa16.66■□□□□ 0.26
SPOCK1-206ENST00000509293 SPZ1Q9BXG8 430 aa16.66■□□□□ 0.26
SPOCK1-206ENST00000509293 EMILIN3Q9NT22 766 aa16.66■□□□□ 0.26
SPOCK1-206ENST00000509293 A0A0G2JLL6 359 aaPredicted RBP16.65■□□□□ 0.26
SPOCK1-206ENST00000509293 CTDNEP1O95476 244 aa16.65■□□□□ 0.26
SPOCK1-206ENST00000509293 HMGN5P82970 282 aaKnown RBP16.65■□□□□ 0.26
SPOCK1-206ENST00000509293 KIAA1755Q5JYT7 1200 aa16.65■□□□□ 0.26
SPOCK1-206ENST00000509293 PRRT2Q7Z6L0 340 aaPredicted RBP16.65■□□□□ 0.26
SPOCK1-206ENST00000509293 RAB11FIP4Q86YS3 637 aa16.65■□□□□ 0.26
SPOCK1-206ENST00000509293 CCDC144CPQ8IYA2 1237 aa16.65■□□□□ 0.26
SPOCK1-206ENST00000509293 PROCA1Q8NCQ7 364 aaPredicted RBP16.65■□□□□ 0.26
SPOCK1-206ENST00000509293 NSUN7Q8NE18 718 aaKnown RBP16.65■□□□□ 0.26
SPOCK1-206ENST00000509293 SMARCC2Q8TAQ2 1214 aa16.65■□□□□ 0.26
SPOCK1-206ENST00000509293 CNKSR2Q8WXI2 1034 aa16.65■□□□□ 0.26
SPOCK1-206ENST00000509293 WNK4Q96J92 1243 aa16.65■□□□□ 0.26
SPOCK1-206ENST00000509293 TMOD4Q9NZQ9 345 aa16.65■□□□□ 0.26
SPOCK1-206ENST00000509293 RBM27Q9P2N5 1060 aaKnown RBP16.65■□□□□ 0.26
SPOCK1-206ENST00000509293 DAXXQ9UER7 740 aaPredicted RBP16.65■□□□□ 0.26
SPOCK1-206ENST00000509293 HSP90AA1P07900 732 aaKnown RBP16.64■□□□□ 0.25
SPOCK1-206ENST00000509293 VCAM1P19320 739 aa16.64■□□□□ 0.25
SPOCK1-206ENST00000509293 GJA5P36382 358 aa16.64■□□□□ 0.25
SPOCK1-206ENST00000509293 HMGCS2P54868 508 aa16.64■□□□□ 0.25
SPOCK1-206ENST00000509293 SNAPC2Q13487 334 aa16.64■□□□□ 0.25
SPOCK1-206ENST00000509293 CCDC96Q2M329 555 aa16.64■□□□□ 0.25
SPOCK1-206ENST00000509293 SPRYD7Q5W111 196 aa16.64■□□□□ 0.25
SPOCK1-206ENST00000509293 RGMBQ6NW40 437 aa16.64■□□□□ 0.25
SPOCK1-206ENST00000509293 FASTKD5Q7L8L6 764 aaKnown RBP16.64■□□□□ 0.25
SPOCK1-206ENST00000509293 NBPF11Q86T75 865 aa16.64■□□□□ 0.25
SPOCK1-206ENST00000509293 FAM160B2Q86V87 743 aa16.64■□□□□ 0.25
SPOCK1-206ENST00000509293 SPICE1Q8N0Z3 855 aa16.64■□□□□ 0.25
SPOCK1-206ENST00000509293 STAG2Q8N3U4 1231 aa16.64■□□□□ 0.25
SPOCK1-206ENST00000509293 SRBD1Q8N5C6 995 aaKnown RBP16.64■□□□□ 0.25
SPOCK1-206ENST00000509293 CHURC1Q8WUH1 139 aa16.64■□□□□ 0.25
SPOCK1-206ENST00000509293 RNF26Q9BY78 433 aaPredicted RBP16.64■□□□□ 0.25
SPOCK1-206ENST00000509293 RIOX1Q9H6W3 641 aa16.64■□□□□ 0.25
SPOCK1-206ENST00000509293 CWC22Q9HCG8 908 aaKnown RBP16.64■□□□□ 0.25
SPOCK1-206ENST00000509293 FEM1BQ9UK73 627 aa16.64■□□□□ 0.25
SPOCK1-206ENST00000509293 STK36Q9NRP7 1315 aa16.64■□□□□ 0.25
SPOCK1-206ENST00000509293 PLEKHA8P1O95397 391 aa16.63■□□□□ 0.25
SPOCK1-206ENST00000509293 GTF2A2P52657 109 aa16.63■□□□□ 0.25
SPOCK1-206ENST00000509293 ZYXQ15942 572 aaKnown RBP16.63■□□□□ 0.25
SPOCK1-206ENST00000509293 FAM83BQ5T0W9 1011 aa16.63■□□□□ 0.25
SPOCK1-206ENST00000509293 CREBZFQ9NS37 354 aa16.63■□□□□ 0.25
SPOCK1-206ENST00000509293 PTPRFP10586 1907 aa16.62■□□□□ 0.25
SPOCK1-206ENST00000509293 PTPDC1A2A3K4 754 aa16.62■□□□□ 0.25
SPOCK1-206ENST00000509293 TMEM232C9JQI7 657 aa16.62■□□□□ 0.25
SPOCK1-206ENST00000509293 PRPF3O43395 683 aaKnown RBP16.62■□□□□ 0.25
SPOCK1-206ENST00000509293 RAD21O60216 631 aa16.62■□□□□ 0.25
SPOCK1-206ENST00000509293 FMNL1O95466 1100 aaPredicted RBP16.62■□□□□ 0.25
SPOCK1-206ENST00000509293 GOLGA8HP0CJ92 632 aa16.62■□□□□ 0.25
SPOCK1-206ENST00000509293 CETPP11597 493 aa16.62■□□□□ 0.25
SPOCK1-206ENST00000509293 HOXA7P31268 230 aaPredicted RBP16.62■□□□□ 0.25
SPOCK1-206ENST00000509293 APLP1P51693 650 aa16.62■□□□□ 0.25
SPOCK1-206ENST00000509293 STAT2P52630 851 aa16.62■□□□□ 0.25
SPOCK1-206ENST00000509293 SSRP1Q08945 709 aaKnown RBP16.62■□□□□ 0.25
SPOCK1-206ENST00000509293 KCTD1Q719H9 257 aa16.62■□□□□ 0.25
SPOCK1-206ENST00000509293 RASGRP2Q7LDG7 609 aa16.62■□□□□ 0.25
SPOCK1-206ENST00000509293 TRIM22Q8IYM9 498 aa16.62■□□□□ 0.25
SPOCK1-206ENST00000509293 RGS22Q8NE09 1264 aa16.62■□□□□ 0.25
SPOCK1-206ENST00000509293 CCDC102AQ96A19 550 aa16.62■□□□□ 0.25
SPOCK1-206ENST00000509293 GPCPD1Q9NPB8 672 aa16.62■□□□□ 0.25
SPOCK1-206ENST00000509293 SMC3Q9UQE7 1217 aa16.62■□□□□ 0.25
SPOCK1-206ENST00000509293 MTMR7Q9Y216 660 aa16.62■□□□□ 0.25
SPOCK1-206ENST00000509293 KIF3AQ9Y496 699 aa16.62■□□□□ 0.25
SPOCK1-206ENST00000509293 FRMPD2Q68DX3 1309 aaPredicted RBP16.62■□□□□ 0.25
SPOCK1-206ENST00000509293 CNTNAP5Q8WYK1 1306 aa16.62■□□□□ 0.25
SPOCK1-206ENST00000509293 SLC10A3P09131 477 aa16.61■□□□□ 0.25
SPOCK1-206ENST00000509293 FDX1P10109 184 aa16.61■□□□□ 0.25
SPOCK1-206ENST00000509293 PDIA4P13667 645 aaKnown RBP16.61■□□□□ 0.25
SPOCK1-206ENST00000509293 ZNF157P51786 506 aaPredicted RBP16.61■□□□□ 0.25
SPOCK1-206ENST00000509293 MOGSQ13724 837 aa16.61■□□□□ 0.25
SPOCK1-206ENST00000509293 SLC35G1Q2M3R5 365 aa16.61■□□□□ 0.25
SPOCK1-206ENST00000509293 RASAL3Q86YV0 1011 aa16.61■□□□□ 0.25
SPOCK1-206ENST00000509293 FAM177A1Q8N128 213 aaPredicted RBP16.61■□□□□ 0.25
SPOCK1-206ENST00000509293 WASF1Q92558 559 aa16.61■□□□□ 0.25
SPOCK1-206ENST00000509293 MTMR8Q96EF0 704 aa16.61■□□□□ 0.25
SPOCK1-206ENST00000509293 MS4A4AQ96JQ5 239 aa16.61■□□□□ 0.25
SPOCK1-206ENST00000509293 NUP88Q99567 741 aaPredicted RBP16.61■□□□□ 0.25
SPOCK1-206ENST00000509293 RPAP3Q9H6T3 665 aaPredicted RBP16.61■□□□□ 0.25
SPOCK1-206ENST00000509293 AGTPBP1Q9UPW5 1226 aa16.61■□□□□ 0.25
SPOCK1-206ENST00000509293 SLC45A1Q9Y2W3 748 aa16.61■□□□□ 0.25
SPOCK1-206ENST00000509293 MYPNQ86TC9 1320 aa16.61■□□□□ 0.25
SPOCK1-206ENST00000509293 LOC285556D6RIA3 1793 aa16.61■□□□□ 0.25
SPOCK1-206ENST00000509293 USP17L15C9J2P7 530 aa16.6■□□□□ 0.25
SPOCK1-206ENST00000509293 USP17L13C9JLJ4 530 aa16.6■□□□□ 0.25
SPOCK1-206ENST00000509293 USP17L11C9JVI0 530 aa16.6■□□□□ 0.25
SPOCK1-206ENST00000509293 USP17L18D6R9N7 530 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms