RNA–Protein interactions for RNA: ENST00000509220.1

COMMD8-202, Transcript of COMM domain containing 8, humanhuman

TSL 2

Gene COMMD8, Length 533 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD8-202ENST00000509220 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.66■□□□□ 0.58
COMMD8-202ENST00000509220 IVNS1ABPQ9Y6Y0 642 aa18.66■□□□□ 0.58
COMMD8-202ENST00000509220 MYH4Q9Y623 1939 aa18.66■□□□□ 0.58
COMMD8-202ENST00000509220 SLC15A5A6NIM6 579 aa18.65■□□□□ 0.58
COMMD8-202ENST00000509220 F5H6K3 240 aa18.65■□□□□ 0.58
COMMD8-202ENST00000509220 STRNO43815 780 aa18.65■□□□□ 0.58
COMMD8-202ENST00000509220 FGRP09769 529 aa18.65■□□□□ 0.58
COMMD8-202ENST00000509220 PTPREP23469 700 aa18.65■□□□□ 0.58
COMMD8-202ENST00000509220 TFAP4Q01664 338 aa18.65■□□□□ 0.58
COMMD8-202ENST00000509220 KLRC3Q07444 240 aa18.65■□□□□ 0.58
COMMD8-202ENST00000509220 MAP2K5Q13163 448 aa18.65■□□□□ 0.58
COMMD8-202ENST00000509220 ZNF589Q86UQ0 364 aaPredicted RBP18.65■□□□□ 0.58
COMMD8-202ENST00000509220 ATG4CQ96DT6 458 aa18.65■□□□□ 0.58
COMMD8-202ENST00000509220 APBA2Q99767 749 aa18.65■□□□□ 0.58
COMMD8-202ENST00000509220 MOV10L1Q9BXT6 1211 aaKnown RBP18.65■□□□□ 0.58
COMMD8-202ENST00000509220 PAK6Q9NQU5 681 aaPredicted RBP18.65■□□□□ 0.58
COMMD8-202ENST00000509220 ORC4O43929 436 aa18.64■□□□□ 0.57
COMMD8-202ENST00000509220 RAD21O60216 631 aa18.64■□□□□ 0.57
COMMD8-202ENST00000509220 SGPL1O95470 568 aa18.64■□□□□ 0.57
COMMD8-202ENST00000509220 CTDSPL2Q05D32 466 aa18.64■□□□□ 0.57
COMMD8-202ENST00000509220 FAM47AQ5JRC9 791 aa18.64■□□□□ 0.57
COMMD8-202ENST00000509220 FAM83BQ5T0W9 1011 aa18.64■□□□□ 0.57
COMMD8-202ENST00000509220 WDR78Q5VTH9 848 aa18.64■□□□□ 0.57
COMMD8-202ENST00000509220 U2AF1L4Q8WU68 220 aaKnown RBP18.64■□□□□ 0.57
COMMD8-202ENST00000509220 TRIB2Q92519 343 aa18.64■□□□□ 0.57
COMMD8-202ENST00000509220 SHISA4Q96DD7 197 aa18.64■□□□□ 0.57
COMMD8-202ENST00000509220 DIAPH3Q9NSV4 1193 aa18.64■□□□□ 0.57
COMMD8-202ENST00000509220 PPP1R9AQ9ULJ8 1098 aa18.64■□□□□ 0.57
COMMD8-202ENST00000509220 NDUFB10O96000 172 aa18.63■□□□□ 0.57
COMMD8-202ENST00000509220 PDE4AP27815 886 aa18.63■□□□□ 0.57
COMMD8-202ENST00000509220 GRB14Q14449 540 aa18.63■□□□□ 0.57
COMMD8-202ENST00000509220 GMCL1P1Q8NEA9 526 aa18.63■□□□□ 0.57
COMMD8-202ENST00000509220 MROH8Q9H579 483 aa18.63■□□□□ 0.57
COMMD8-202ENST00000509220 RPTORQ8N122 1335 aa18.63■□□□□ 0.57
COMMD8-202ENST00000509220 TSPY2A6NKD2 308 aa18.62■□□□□ 0.57
COMMD8-202ENST00000509220 VWA5AO00534 786 aa18.62■□□□□ 0.57
COMMD8-202ENST00000509220 SLC25A27O95847 323 aa18.62■□□□□ 0.57
COMMD8-202ENST00000509220 HOXC6P09630 235 aa18.62■□□□□ 0.57
COMMD8-202ENST00000509220 PCP11498 1178 aaKnown RBP18.62■□□□□ 0.57
COMMD8-202ENST00000509220 ZKSCAN1P17029 563 aaPredicted RBP18.62■□□□□ 0.57
COMMD8-202ENST00000509220 ERCC3P19447 782 aa18.62■□□□□ 0.57
COMMD8-202ENST00000509220 MAP3K21Q5TCX8 1036 aa18.62■□□□□ 0.57
COMMD8-202ENST00000509220 CWC27Q6UX04 472 aaKnown RBP18.62■□□□□ 0.57
COMMD8-202ENST00000509220 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.62■□□□□ 0.57
COMMD8-202ENST00000509220 HMX1Q9NP08 348 aaPredicted RBP18.62■□□□□ 0.57
COMMD8-202ENST00000509220 FBXO28Q9NVF7 368 aa18.62■□□□□ 0.57
COMMD8-202ENST00000509220 PLS1Q14651 629 aa18.61■□□□□ 0.57
COMMD8-202ENST00000509220 TMEM132BQ14DG7 1078 aa18.61■□□□□ 0.57
COMMD8-202ENST00000509220 TTC22Q5TAA0 569 aa18.61■□□□□ 0.57
COMMD8-202ENST00000509220 ABRAQ8N0Z2 381 aa18.61■□□□□ 0.57
COMMD8-202ENST00000509220 PRPF38AQ8NAV1 312 aaKnown RBP18.61■□□□□ 0.57
COMMD8-202ENST00000509220 DEFB118Q96PH6 123 aa18.61■□□□□ 0.57
COMMD8-202ENST00000509220 SLF1Q9BQI6 1058 aa18.61■□□□□ 0.57
COMMD8-202ENST00000509220 COL11A1P12107 1806 aaPredicted RBP18.6■□□□□ 0.57
COMMD8-202ENST00000509220 ZNF236Q9UL36 1845 aa18.6■□□□□ 0.57
COMMD8-202ENST00000509220 RANBP6O60518 1105 aaKnown RBP18.6■□□□□ 0.57
COMMD8-202ENST00000509220 COPB2P35606 906 aa18.6■□□□□ 0.57
COMMD8-202ENST00000509220 TRIM32Q13049 653 aa18.6■□□□□ 0.57
COMMD8-202ENST00000509220 PRPF38BQ5VTL8 546 aaKnown RBP18.6■□□□□ 0.57
COMMD8-202ENST00000509220 SAMD1Q6SPF0 538 aaPredicted RBP18.6■□□□□ 0.57
COMMD8-202ENST00000509220 RIOX2Q8IUF8 465 aa18.6■□□□□ 0.57
COMMD8-202ENST00000509220 NUP88Q99567 741 aaPredicted RBP18.6■□□□□ 0.57
COMMD8-202ENST00000509220 CRISPLD2Q9H0B8 497 aa18.6■□□□□ 0.57
COMMD8-202ENST00000509220 INCENPQ9NQS7 918 aa18.6■□□□□ 0.57
COMMD8-202ENST00000509220 IL17RBQ9NRM6 502 aa18.6■□□□□ 0.57
COMMD8-202ENST00000509220 TACC3Q9Y6A5 838 aa18.6■□□□□ 0.57
COMMD8-202ENST00000509220 TFRCP02786 760 aaKnown RBP18.59■□□□□ 0.57
COMMD8-202ENST00000509220 PRKAR2AP13861 404 aaKnown RBP18.59■□□□□ 0.57
COMMD8-202ENST00000509220 GSPT1P15170 499 aaKnown RBP18.59■□□□□ 0.57
COMMD8-202ENST00000509220 STAT3P40763 770 aa18.59■□□□□ 0.57
COMMD8-202ENST00000509220 NOVP48745 357 aa18.59■□□□□ 0.57
COMMD8-202ENST00000509220 NT5C2P49902 561 aa18.59■□□□□ 0.57
COMMD8-202ENST00000509220 CCL14Q16627 93 aa18.59■□□□□ 0.57
COMMD8-202ENST00000509220 UBE2Q1Q7Z7E8 422 aa18.59■□□□□ 0.57
COMMD8-202ENST00000509220 NCAPG2Q86XI2 1143 aa18.59■□□□□ 0.57
COMMD8-202ENST00000509220 LRRC47Q8N1G4 583 aaKnown RBP18.59■□□□□ 0.57
COMMD8-202ENST00000509220 REPS2Q8NFH8 660 aa18.59■□□□□ 0.57
COMMD8-202ENST00000509220 TCP11L1Q9NUJ3 509 aa18.59■□□□□ 0.57
COMMD8-202ENST00000509220 SLC5A4Q9NY91 659 aa18.59■□□□□ 0.57
COMMD8-202ENST00000509220 FEM1BQ9UK73 627 aa18.59■□□□□ 0.57
COMMD8-202ENST00000509220 ZNF214Q9UL59 606 aaPredicted RBP18.59■□□□□ 0.57
COMMD8-202ENST00000509220 STX8Q9UNK0 236 aa18.59■□□□□ 0.57
COMMD8-202ENST00000509220 BMP3P12645 472 aa18.58■□□□□ 0.56
COMMD8-202ENST00000509220 ADORA2AP29274 412 aa18.58■□□□□ 0.56
COMMD8-202ENST00000509220 CACNB2Q08289 660 aaPredicted RBP18.58■□□□□ 0.56
COMMD8-202ENST00000509220 AKNAD1Q5T1N1 836 aa18.58■□□□□ 0.56
COMMD8-202ENST00000509220 MFSD14CQ5VZR4 134 aa18.58■□□□□ 0.56
COMMD8-202ENST00000509220 SLFN13Q68D06 897 aa18.58■□□□□ 0.56
COMMD8-202ENST00000509220 MFSD6Q6ZSS7 791 aa18.58■□□□□ 0.56
COMMD8-202ENST00000509220 DPP9Q86TI2 863 aa18.58■□□□□ 0.56
COMMD8-202ENST00000509220 STAG1Q8WVM7 1258 aa18.58■□□□□ 0.56
COMMD8-202ENST00000509220 GMCL1Q96IK5 515 aa18.58■□□□□ 0.56
COMMD8-202ENST00000509220 DSCC1Q9BVC3 393 aa18.58■□□□□ 0.56
COMMD8-202ENST00000509220 RNF41Q9H4P4 317 aaPredicted RBP18.58■□□□□ 0.56
COMMD8-202ENST00000509220 TOMM22Q9NS69 142 aa18.58■□□□□ 0.56
COMMD8-202ENST00000509220 ZNF213O14771 459 aa18.57■□□□□ 0.56
COMMD8-202ENST00000509220 ATP2A1O14983 1001 aa18.57■□□□□ 0.56
COMMD8-202ENST00000509220 FDX1P10109 184 aa18.57■□□□□ 0.56
COMMD8-202ENST00000509220 FCER1AP12319 257 aa18.57■□□□□ 0.56
COMMD8-202ENST00000509220 ANKLE1Q8NAG6 615 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms