RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 CA12O43570 354 aa8.63□□□□□ -1.03
TOPBP1-207ENST00000509162 PRDM1O75626 825 aa8.63□□□□□ -1.03
TOPBP1-207ENST00000509162 POLR3DP05423 398 aaPredicted RBP8.63□□□□□ -1.03
TOPBP1-207ENST00000509162 BCRP11274 1271 aa8.63□□□□□ -1.03
TOPBP1-207ENST00000509162 CTDSPL2Q05D32 466 aa8.63□□□□□ -1.03
TOPBP1-207ENST00000509162 SPP2Q13103 211 aa8.63□□□□□ -1.03
TOPBP1-207ENST00000509162 ANKRD23Q86SG2 305 aa8.63□□□□□ -1.03
TOPBP1-207ENST00000509162 FOXP4Q8IVH2 680 aaPredicted RBP8.63□□□□□ -1.03
TOPBP1-207ENST00000509162 CRACR2BQ8N4Y2 399 aaPredicted RBP8.63□□□□□ -1.03
TOPBP1-207ENST00000509162 ZNF280CQ8ND82 737 aa8.63□□□□□ -1.03
TOPBP1-207ENST00000509162 RILPL2Q969X0 211 aa8.63□□□□□ -1.03
TOPBP1-207ENST00000509162 PICK1Q9NRD5 415 aa8.63□□□□□ -1.03
TOPBP1-207ENST00000509162 HELLSQ9NRZ9 838 aa8.63□□□□□ -1.03
TOPBP1-207ENST00000509162 MGAMO43451 1857 aa8.63□□□□□ -1.03
TOPBP1-207ENST00000509162 USP17L5A8MUK1 530 aa8.62□□□□□ -1.03
TOPBP1-207ENST00000509162 PDHXO00330 501 aa8.62□□□□□ -1.03
TOPBP1-207ENST00000509162 CNMDO75829 334 aa8.62□□□□□ -1.03
TOPBP1-207ENST00000509162 ASNSP08243 561 aa8.62□□□□□ -1.03
TOPBP1-207ENST00000509162 HSPD1P10809 573 aaKnown RBP8.62□□□□□ -1.03
TOPBP1-207ENST00000509162 CETPP11597 493 aa8.62□□□□□ -1.03
TOPBP1-207ENST00000509162 CHMLP26374 656 aa8.62□□□□□ -1.03
TOPBP1-207ENST00000509162 PPARAQ07869 468 aa8.62□□□□□ -1.03
TOPBP1-207ENST00000509162 TAF1CQ15572 869 aaPredicted RBP8.62□□□□□ -1.03
TOPBP1-207ENST00000509162 ZYXQ15942 572 aaKnown RBP8.62□□□□□ -1.03
TOPBP1-207ENST00000509162 ABCB5Q2M3G0 1257 aa8.62□□□□□ -1.03
TOPBP1-207ENST00000509162 NOM1Q5C9Z4 860 aaKnown RBP8.62□□□□□ -1.03
TOPBP1-207ENST00000509162 GIMAP6Q6P9H5 292 aa8.62□□□□□ -1.03
TOPBP1-207ENST00000509162 C17orf99Q6UX52 265 aa8.62□□□□□ -1.03
TOPBP1-207ENST00000509162 TTC6Q86TZ1 520 aa8.62□□□□□ -1.03
TOPBP1-207ENST00000509162 CD99L2Q8TCZ2 262 aa8.62□□□□□ -1.03
TOPBP1-207ENST00000509162 C12orf42Q96LP6 360 aa8.62□□□□□ -1.03
TOPBP1-207ENST00000509162 TXNRD2Q9NNW7 524 aa8.62□□□□□ -1.03
TOPBP1-207ENST00000509162 KIAA1468Q9P260 1216 aa8.62□□□□□ -1.03
TOPBP1-207ENST00000509162 CPA4Q9UI42 421 aa8.62□□□□□ -1.03
TOPBP1-207ENST00000509162 AGTPBP1Q9UPW5 1226 aa8.62□□□□□ -1.03
TOPBP1-207ENST00000509162 MYH4Q9Y623 1939 aa8.62□□□□□ -1.03
TOPBP1-207ENST00000509162 PATL2C9JE40 543 aaKnown RBP8.61□□□□□ -1.03
TOPBP1-207ENST00000509162 MAP3K7O43318 606 aa8.61□□□□□ -1.03
TOPBP1-207ENST00000509162 NMT2O60551 498 aa8.61□□□□□ -1.03
TOPBP1-207ENST00000509162 FGAP02671 866 aa8.61□□□□□ -1.03
TOPBP1-207ENST00000509162 VCAM1P19320 739 aa8.61□□□□□ -1.03
TOPBP1-207ENST00000509162 TDO2P48775 406 aa8.61□□□□□ -1.03
TOPBP1-207ENST00000509162 PTPN5P54829 565 aa8.61□□□□□ -1.03
TOPBP1-207ENST00000509162 BACE1P56817 501 aa8.61□□□□□ -1.03
TOPBP1-207ENST00000509162 HAND2P61296 217 aa8.61□□□□□ -1.03
TOPBP1-207ENST00000509162 PTH1RQ03431 593 aa8.61□□□□□ -1.03
TOPBP1-207ENST00000509162 ALX1Q15699 326 aa8.61□□□□□ -1.03
TOPBP1-207ENST00000509162 CERKLQ49MI3 558 aaPredicted RBP8.61□□□□□ -1.03
TOPBP1-207ENST00000509162 MCMDC2Q4G0Z9 681 aa8.61□□□□□ -1.03
TOPBP1-207ENST00000509162 CWC27Q6UX04 472 aaKnown RBP8.61□□□□□ -1.03
TOPBP1-207ENST00000509162 GADL1Q6ZQY3 521 aa8.61□□□□□ -1.03
TOPBP1-207ENST00000509162 STOX1Q6ZVD7 989 aa8.61□□□□□ -1.03
TOPBP1-207ENST00000509162 ANKK1Q8NFD2 765 aa8.61□□□□□ -1.03
TOPBP1-207ENST00000509162 COL11A1P12107 1806 aaPredicted RBP8.61□□□□□ -1.03
TOPBP1-207ENST00000509162 TNRC18O15417 2968 aaPredicted RBP8.6□□□□□ -1.03
TOPBP1-207ENST00000509162 MINDY4BA8MYZ0 360 aa8.6□□□□□ -1.03
TOPBP1-207ENST00000509162 TLR2O60603 784 aa8.6□□□□□ -1.03
TOPBP1-207ENST00000509162 FGRP09769 529 aa8.6□□□□□ -1.03
TOPBP1-207ENST00000509162 NOVP48745 357 aa8.6□□□□□ -1.03
TOPBP1-207ENST00000509162 RAB3GAP1Q15042 981 aa8.6□□□□□ -1.03
TOPBP1-207ENST00000509162 FAM47AQ5JRC9 791 aa8.6□□□□□ -1.03
TOPBP1-207ENST00000509162 PROCA1Q8NCQ7 364 aaPredicted RBP8.6□□□□□ -1.03
TOPBP1-207ENST00000509162 MCOLN1Q9GZU1 580 aa8.6□□□□□ -1.03
TOPBP1-207ENST00000509162 KIAA1683Q9H0B3 1180 aa8.6□□□□□ -1.03
TOPBP1-207ENST00000509162 NAPBQ9H115 298 aa8.6□□□□□ -1.03
TOPBP1-207ENST00000509162 ASCC2Q9H1I8 757 aaPredicted RBP8.6□□□□□ -1.03
TOPBP1-207ENST00000509162 ZCCHC17Q9NP64 241 aaKnown RBP8.6□□□□□ -1.03
TOPBP1-207ENST00000509162 SWAP70Q9UH65 585 aa8.6□□□□□ -1.03
TOPBP1-207ENST00000509162 ANAPC4Q9UJX5 808 aa8.6□□□□□ -1.03
TOPBP1-207ENST00000509162 ZNF236Q9UL36 1845 aa8.59□□□□□ -1.03
TOPBP1-207ENST00000509162 RAD50Q92878 1312 aa8.59□□□□□ -1.03
TOPBP1-207ENST00000509162 SGSM2O43147 1006 aa8.59□□□□□ -1.03
TOPBP1-207ENST00000509162 EEF2P13639 858 aaKnown RBP8.59□□□□□ -1.03
TOPBP1-207ENST00000509162 TAL1P17542 331 aaPredicted RBP8.59□□□□□ -1.03
TOPBP1-207ENST00000509162 GNAT2P19087 354 aa8.59□□□□□ -1.03
TOPBP1-207ENST00000509162 INHBEP58166 350 aa8.59□□□□□ -1.03
TOPBP1-207ENST00000509162 ICA1Q05084 483 aa8.59□□□□□ -1.03
TOPBP1-207ENST00000509162 TMEM179Q6ZVK1 233 aa8.59□□□□□ -1.03
TOPBP1-207ENST00000509162 OTOP1Q7RTM1 612 aa8.59□□□□□ -1.03
TOPBP1-207ENST00000509162 LRRC47Q8N1G4 583 aaKnown RBP8.59□□□□□ -1.03
TOPBP1-207ENST00000509162 CEP95Q96GE4 821 aa8.59□□□□□ -1.03
TOPBP1-207ENST00000509162 TRIM47Q96LD4 638 aa8.59□□□□□ -1.03
TOPBP1-207ENST00000509162 PCMTD1Q96MG8 357 aaPredicted RBP8.59□□□□□ -1.03
TOPBP1-207ENST00000509162 PHOX2BQ99453 314 aa8.59□□□□□ -1.03
TOPBP1-207ENST00000509162 NUP88Q99567 741 aaPredicted RBP8.59□□□□□ -1.03
TOPBP1-207ENST00000509162 LSG1Q9H089 658 aaKnown RBP8.59□□□□□ -1.03
TOPBP1-207ENST00000509162 CDHR5Q9HBB8 845 aa8.59□□□□□ -1.03
TOPBP1-207ENST00000509162 IL17RBQ9NRM6 502 aa8.59□□□□□ -1.03
TOPBP1-207ENST00000509162 DIAPH3Q9NSV4 1193 aa8.59□□□□□ -1.03
TOPBP1-207ENST00000509162 SLC45A1Q9Y2W3 748 aa8.59□□□□□ -1.03
TOPBP1-207ENST00000509162 LCTP09848 1927 aa8.58□□□□□ -1.04
TOPBP1-207ENST00000509162 RBBP6Q7Z6E9 1792 aaKnown RBP8.58□□□□□ -1.04
TOPBP1-207ENST00000509162 LRRC37A2A6NM11 1700 aa8.58□□□□□ -1.04
TOPBP1-207ENST00000509162 MPHOSPH10O00566 681 aaKnown RBP8.58□□□□□ -1.04
TOPBP1-207ENST00000509162 ORC4O43929 436 aa8.58□□□□□ -1.04
TOPBP1-207ENST00000509162 FKTNO75072 461 aa8.58□□□□□ -1.04
TOPBP1-207ENST00000509162 ALDH1A1P00352 501 aa8.58□□□□□ -1.04
TOPBP1-207ENST00000509162 LACTBP83111 547 aaPredicted RBP8.58□□□□□ -1.04
TOPBP1-207ENST00000509162 TSR1Q2NL82 804 aaKnown RBP8.58□□□□□ -1.04
TOPBP1-207ENST00000509162 BMP2KLQ5H9B9 411 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms