RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 CEP95Q96GE4 821 aa22.14■■□□□ 1.13
UBE3D-207ENST00000509102 MOV10L1Q9BXT6 1211 aaKnown RBP22.14■■□□□ 1.13
UBE3D-207ENST00000509102 MROH8Q9H579 483 aa22.14■■□□□ 1.13
UBE3D-207ENST00000509102 DIAPH3Q9NSV4 1193 aa22.14■■□□□ 1.13
UBE3D-207ENST00000509102 SLC5A4Q9NY91 659 aa22.14■■□□□ 1.13
UBE3D-207ENST00000509102 MTMR4Q9NYA4 1195 aa22.14■■□□□ 1.13
UBE3D-207ENST00000509102 PLIN4Q96Q06 1357 aa22.13■■□□□ 1.13
UBE3D-207ENST00000509102 A0A0D9SFI3 127 aa22.13■■□□□ 1.13
UBE3D-207ENST00000509102 TSPY2A6NKD2 308 aa22.13■■□□□ 1.13
UBE3D-207ENST00000509102 F5H6K3 240 aa22.13■■□□□ 1.13
UBE3D-207ENST00000509102 PRKAR2AP13861 404 aaKnown RBP22.13■■□□□ 1.13
UBE3D-207ENST00000509102 IRX6P78412 446 aaPredicted RBP22.13■■□□□ 1.13
UBE3D-207ENST00000509102 KLRC3Q07444 240 aa22.13■■□□□ 1.13
UBE3D-207ENST00000509102 NMIQ13287 307 aaPredicted RBP22.13■■□□□ 1.13
UBE3D-207ENST00000509102 ALX1Q15699 326 aa22.13■■□□□ 1.13
UBE3D-207ENST00000509102 MFSD14CQ5VZR4 134 aa22.13■■□□□ 1.13
UBE3D-207ENST00000509102 NCAPG2Q86XI2 1143 aa22.13■■□□□ 1.13
UBE3D-207ENST00000509102 HTATIP2Q9BUP3 242 aa22.13■■□□□ 1.13
UBE3D-207ENST00000509102 CTDP1Q9Y5B0 961 aaPredicted RBP22.13■■□□□ 1.13
UBE3D-207ENST00000509102 GREB1LQ9C091 1923 aaPredicted RBP22.13■■□□□ 1.13
UBE3D-207ENST00000509102 CCDC171Q6TFL3 1326 aa22.12■■□□□ 1.13
UBE3D-207ENST00000509102 IGKV6D-41A0A0C4DH26 115 aa22.12■■□□□ 1.13
UBE3D-207ENST00000509102 FARP2O94887 1054 aaPredicted RBP22.12■■□□□ 1.13
UBE3D-207ENST00000509102 SLC25A27O95847 323 aa22.12■■□□□ 1.13
UBE3D-207ENST00000509102 ERCC3P19447 782 aa22.12■■□□□ 1.13
UBE3D-207ENST00000509102 SDSP20132 328 aa22.12■■□□□ 1.13
UBE3D-207ENST00000509102 GRB14Q14449 540 aa22.12■■□□□ 1.13
UBE3D-207ENST00000509102 VPS53Q5VIR6 699 aa22.12■■□□□ 1.13
UBE3D-207ENST00000509102 DPP9Q86TI2 863 aa22.12■■□□□ 1.13
UBE3D-207ENST00000509102 ANAPC4Q9UJX5 808 aa22.12■■□□□ 1.13
UBE3D-207ENST00000509102 PPP1R9AQ9ULJ8 1098 aa22.12■■□□□ 1.13
UBE3D-207ENST00000509102 PLXNB2O15031 1838 aa22.11■■□□□ 1.13
UBE3D-207ENST00000509102 NDUFB10O96000 172 aa22.11■■□□□ 1.13
UBE3D-207ENST00000509102 COPB2P35606 906 aa22.11■■□□□ 1.13
UBE3D-207ENST00000509102 CTDSPL2Q05D32 466 aa22.11■■□□□ 1.13
UBE3D-207ENST00000509102 FAM47AQ5JRC9 791 aa22.11■■□□□ 1.13
UBE3D-207ENST00000509102 MKL1Q969V6 931 aa22.11■■□□□ 1.13
UBE3D-207ENST00000509102 SLF1Q9BQI6 1058 aa22.11■■□□□ 1.13
UBE3D-207ENST00000509102 TOMM22Q9NS69 142 aa22.11■■□□□ 1.13
UBE3D-207ENST00000509102 ISY1Q9ULR0 285 aaKnown RBP22.11■■□□□ 1.13
UBE3D-207ENST00000509102 MKI67P46013 3256 aaKnown RBP22.11■■□□□ 1.13
UBE3D-207ENST00000509102 ZMYM6O95789 1325 aa22.1■■□□□ 1.13
UBE3D-207ENST00000509102 A0A0G2JMZ2 1700 aa22.1■■□□□ 1.13
UBE3D-207ENST00000509102 FOXP2O15409 715 aa22.1■■□□□ 1.13
UBE3D-207ENST00000509102 RANBP6O60518 1105 aaKnown RBP22.1■■□□□ 1.13
UBE3D-207ENST00000509102 HOXC6P09630 235 aa22.1■■□□□ 1.13
UBE3D-207ENST00000509102 HSPD1P10809 573 aaKnown RBP22.1■■□□□ 1.13
UBE3D-207ENST00000509102 FBXO28Q9NVF7 368 aa22.1■■□□□ 1.13
UBE3D-207ENST00000509102 VWA5AO00534 786 aa22.09■■□□□ 1.13
UBE3D-207ENST00000509102 FGAP02671 866 aa22.09■■□□□ 1.13
UBE3D-207ENST00000509102 FCER1AP12319 257 aa22.09■■□□□ 1.13
UBE3D-207ENST00000509102 ADORA2AP29274 412 aa22.09■■□□□ 1.13
UBE3D-207ENST00000509102 TRIM32Q13049 653 aa22.09■■□□□ 1.13
UBE3D-207ENST00000509102 TMEM132BQ14DG7 1078 aa22.09■■□□□ 1.13
UBE3D-207ENST00000509102 CCL14Q16627 93 aa22.09■■□□□ 1.13
UBE3D-207ENST00000509102 MAP3K21Q5TCX8 1036 aa22.09■■□□□ 1.13
UBE3D-207ENST00000509102 ABRAQ8N0Z2 381 aa22.09■■□□□ 1.13
UBE3D-207ENST00000509102 LRRC47Q8N1G4 583 aaKnown RBP22.09■■□□□ 1.13
UBE3D-207ENST00000509102 ANKLE1Q8NAG6 615 aa22.09■■□□□ 1.13
UBE3D-207ENST00000509102 PRPF38AQ8NAV1 312 aaKnown RBP22.09■■□□□ 1.13
UBE3D-207ENST00000509102 GMCL1P1Q8NEA9 526 aa22.09■■□□□ 1.13
UBE3D-207ENST00000509102 DPF3Q92784 378 aa22.09■■□□□ 1.13
UBE3D-207ENST00000509102 NUP88Q99567 741 aaPredicted RBP22.09■■□□□ 1.13
UBE3D-207ENST00000509102 ADAMTS5Q9UNA0 930 aa22.09■■□□□ 1.13
UBE3D-207ENST00000509102 STX8Q9UNK0 236 aa22.09■■□□□ 1.13
UBE3D-207ENST00000509102 STAT3P40763 770 aa22.08■■□□□ 1.13
UBE3D-207ENST00000509102 CACNB2Q08289 660 aaPredicted RBP22.08■■□□□ 1.13
UBE3D-207ENST00000509102 CWC27Q6UX04 472 aaKnown RBP22.08■■□□□ 1.13
UBE3D-207ENST00000509102 ZNF589Q86UQ0 364 aaPredicted RBP22.08■■□□□ 1.13
UBE3D-207ENST00000509102 CRISPLD2Q9H0B8 497 aa22.08■■□□□ 1.13
UBE3D-207ENST00000509102 FEM1BQ9UK73 627 aa22.08■■□□□ 1.13
UBE3D-207ENST00000509102 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.08■■□□□ 1.13
UBE3D-207ENST00000509102 RLFQ13129 1914 aa22.08■■□□□ 1.12
UBE3D-207ENST00000509102 ORC4O43929 436 aa22.07■■□□□ 1.12
UBE3D-207ENST00000509102 ZBED4O75132 1171 aa22.07■■□□□ 1.12
UBE3D-207ENST00000509102 PCP11498 1178 aaKnown RBP22.07■■□□□ 1.12
UBE3D-207ENST00000509102 SLFN13Q68D06 897 aa22.07■■□□□ 1.12
UBE3D-207ENST00000509102 RIOX2Q8IUF8 465 aa22.07■■□□□ 1.12
UBE3D-207ENST00000509102 MYH4Q9Y623 1939 aa22.07■■□□□ 1.12
UBE3D-207ENST00000509102 BMP3P12645 472 aa22.06■■□□□ 1.12
UBE3D-207ENST00000509102 IKQ13123 557 aaPredicted RBP22.06■■□□□ 1.12
UBE3D-207ENST00000509102 KCTD2Q14681 263 aa22.06■■□□□ 1.12
UBE3D-207ENST00000509102 RRP12Q5JTH9 1297 aaKnown RBP22.06■■□□□ 1.12
UBE3D-207ENST00000509102 NECAB2Q7Z6G3 386 aa22.06■■□□□ 1.12
UBE3D-207ENST00000509102 KIFC2Q96AC6 838 aa22.06■■□□□ 1.12
UBE3D-207ENST00000509102 MMP19Q99542 508 aa22.06■■□□□ 1.12
UBE3D-207ENST00000509102 TEX13BQ9BXU2 312 aa22.06■■□□□ 1.12
UBE3D-207ENST00000509102 RNF41Q9H4P4 317 aaPredicted RBP22.06■■□□□ 1.12
UBE3D-207ENST00000509102 SLC1A4P43007 532 aa22.05■■□□□ 1.12
UBE3D-207ENST00000509102 MFSD6Q6ZSS7 791 aa22.05■■□□□ 1.12
UBE3D-207ENST00000509102 UBE2Q1Q7Z7E8 422 aa22.05■■□□□ 1.12
UBE3D-207ENST00000509102 ZNF236Q9UL36 1845 aa22.05■■□□□ 1.12
UBE3D-207ENST00000509102 PARP14Q460N5 1801 aa22.04■■□□□ 1.12
UBE3D-207ENST00000509102 MSCO60682 206 aa22.04■■□□□ 1.12
UBE3D-207ENST00000509102 FDX1P10109 184 aa22.04■■□□□ 1.12
UBE3D-207ENST00000509102 OLFML2BQ68BL8 750 aa22.04■■□□□ 1.12
UBE3D-207ENST00000509102 NPLOC4Q8TAT6 608 aa22.04■■□□□ 1.12
UBE3D-207ENST00000509102 CHURC1Q8WUH1 139 aa22.04■■□□□ 1.12
UBE3D-207ENST00000509102 GMCL1Q96IK5 515 aa22.04■■□□□ 1.12
UBE3D-207ENST00000509102 ZNF214Q9UL59 606 aaPredicted RBP22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms