RNA–Protein interactions for RNA: ENST00000509023.5

SNCAIP-211, Transcript of synuclein alpha interacting protein, humanhuman

TSL 2

Gene SNCAIP, Length 1,972 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-211ENST00000509023 GMCL1Q96IK5 515 aa17.22■□□□□ 0.35
SNCAIP-211ENST00000509023 WDR18Q9BV38 432 aa17.22■□□□□ 0.35
SNCAIP-211ENST00000509023 GPCPD1Q9NPB8 672 aa17.22■□□□□ 0.35
SNCAIP-211ENST00000509023 ISY1Q9ULR0 285 aaKnown RBP17.22■□□□□ 0.35
SNCAIP-211ENST00000509023 PHIPQ8WWQ0 1821 aa17.22■□□□□ 0.35
SNCAIP-211ENST00000509023 STK36Q9NRP7 1315 aa17.21■□□□□ 0.35
SNCAIP-211ENST00000509023 ITGBL1O95965 494 aaPredicted RBP17.21■□□□□ 0.35
SNCAIP-211ENST00000509023 SPP2Q13103 211 aa17.21■□□□□ 0.35
SNCAIP-211ENST00000509023 MTMR2Q13614 643 aa17.21■□□□□ 0.35
SNCAIP-211ENST00000509023 KIAA1755Q5JYT7 1200 aa17.21■□□□□ 0.35
SNCAIP-211ENST00000509023 KCTD1Q719H9 257 aa17.21■□□□□ 0.35
SNCAIP-211ENST00000509023 ZNF280CQ8ND82 737 aa17.21■□□□□ 0.35
SNCAIP-211ENST00000509023 LZTS2Q9BRK4 669 aa17.21■□□□□ 0.35
SNCAIP-211ENST00000509023 RNF26Q9BY78 433 aaPredicted RBP17.21■□□□□ 0.35
SNCAIP-211ENST00000509023 KIAA1683Q9H0B3 1180 aa17.21■□□□□ 0.35
SNCAIP-211ENST00000509023 CPVLQ9H3G5 476 aa17.21■□□□□ 0.35
SNCAIP-211ENST00000509023 USP17L10C9JJH3 530 aa17.2■□□□□ 0.34
SNCAIP-211ENST00000509023 UBE2Q2LH0YL09 131 aa17.2■□□□□ 0.34
SNCAIP-211ENST00000509023 KIF3CO14782 793 aa17.2■□□□□ 0.34
SNCAIP-211ENST00000509023 CELF2O95319 508 aaKnown RBP17.2■□□□□ 0.34
SNCAIP-211ENST00000509023 PKP1Q13835 747 aa17.2■□□□□ 0.34
SNCAIP-211ENST00000509023 CLMNQ96JQ2 1002 aa17.2■□□□□ 0.34
SNCAIP-211ENST00000509023 NUP88Q99567 741 aaPredicted RBP17.2■□□□□ 0.34
SNCAIP-211ENST00000509023 ELP3Q9H9T3 547 aa17.2■□□□□ 0.34
SNCAIP-211ENST00000509023 CIZ1Q9ULV3 898 aaPredicted RBP17.2■□□□□ 0.34
SNCAIP-211ENST00000509023 KIF3AQ9Y496 699 aa17.2■□□□□ 0.34
SNCAIP-211ENST00000509023 TRIM75PA6NK02 468 aa17.2■□□□□ 0.34
SNCAIP-211ENST00000509023 CYTH3O43739 400 aa17.2■□□□□ 0.34
SNCAIP-211ENST00000509023 SYT1P21579 422 aa17.2■□□□□ 0.34
SNCAIP-211ENST00000509023 AKAP17AQ02040 695 aaKnown RBP17.2■□□□□ 0.34
SNCAIP-211ENST00000509023 SLC35G1Q2M3R5 365 aa17.2■□□□□ 0.34
SNCAIP-211ENST00000509023 LARP1BQ659C4 914 aaKnown RBP17.2■□□□□ 0.34
SNCAIP-211ENST00000509023 TTBK2Q6IQ55 1244 aa17.2■□□□□ 0.34
SNCAIP-211ENST00000509023 UBA5Q9GZZ9 404 aa17.2■□□□□ 0.34
SNCAIP-211ENST00000509023 GBA2Q9HCG7 927 aaPredicted RBP17.2■□□□□ 0.34
SNCAIP-211ENST00000509023 CHMP5Q9NZZ3 219 aa17.2■□□□□ 0.34
SNCAIP-211ENST00000509023 PRPF3O43395 683 aaKnown RBP17.19■□□□□ 0.34
SNCAIP-211ENST00000509023 BMP3P12645 472 aa17.19■□□□□ 0.34
SNCAIP-211ENST00000509023 BACE1P56817 501 aa17.19■□□□□ 0.34
SNCAIP-211ENST00000509023 SPZ1Q9BXG8 430 aa17.19■□□□□ 0.34
SNCAIP-211ENST00000509023 AFG3L2Q9Y4W6 797 aa17.19■□□□□ 0.34
SNCAIP-211ENST00000509023 V9GY48 417 aaPredicted RBP17.19■□□□□ 0.34
SNCAIP-211ENST00000509023 hCG_1642624A0A1W2PR95 340 aa17.19■□□□□ 0.34
SNCAIP-211ENST00000509023 DEXIO95424 95 aa17.19■□□□□ 0.34
SNCAIP-211ENST00000509023 PDCP20941 246 aa17.19■□□□□ 0.34
SNCAIP-211ENST00000509023 FOSBP53539 338 aa17.19■□□□□ 0.34
SNCAIP-211ENST00000509023 USP14P54578 494 aa17.19■□□□□ 0.34
SNCAIP-211ENST00000509023 FKBP1BP68106 108 aa17.19■□□□□ 0.34
SNCAIP-211ENST00000509023 DGKZQ13574 1117 aa17.19■□□□□ 0.34
SNCAIP-211ENST00000509023 LDLRAD1Q5T700 205 aa17.19■□□□□ 0.34
SNCAIP-211ENST00000509023 CNKSR2Q8WXI2 1034 aa17.19■□□□□ 0.34
SNCAIP-211ENST00000509023 PIBF1Q8WXW3 757 aa17.19■□□□□ 0.34
SNCAIP-211ENST00000509023 AIFM3Q96NN9 605 aa17.19■□□□□ 0.34
SNCAIP-211ENST00000509023 SMARCA1P28370 1054 aa17.18■□□□□ 0.34
SNCAIP-211ENST00000509023 SLC16A2P36021 539 aa17.18■□□□□ 0.34
SNCAIP-211ENST00000509023 FAM83BQ5T0W9 1011 aa17.18■□□□□ 0.34
SNCAIP-211ENST00000509023 WASF1Q92558 559 aa17.18■□□□□ 0.34
SNCAIP-211ENST00000509023 LPAR1Q92633 364 aa17.18■□□□□ 0.34
SNCAIP-211ENST00000509023 ALG1Q9BT22 464 aa17.18■□□□□ 0.34
SNCAIP-211ENST00000509023 TMEM232C9JQI7 657 aa17.17■□□□□ 0.34
SNCAIP-211ENST00000509023 STX6O43752 255 aa17.17■□□□□ 0.34
SNCAIP-211ENST00000509023 PPATQ06203 517 aa17.17■□□□□ 0.34
SNCAIP-211ENST00000509023 ERO1BQ86YB8 467 aa17.17■□□□□ 0.34
SNCAIP-211ENST00000509023 C2orf69Q8N8R5 385 aa17.17■□□□□ 0.34
SNCAIP-211ENST00000509023 OTUD5Q96G74 571 aa17.17■□□□□ 0.34
SNCAIP-211ENST00000509023 RIOX1Q9H6W3 641 aa17.17■□□□□ 0.34
SNCAIP-211ENST00000509023 VAT1LQ9HCJ6 419 aa17.17■□□□□ 0.34
SNCAIP-211ENST00000509023 EMILIN3Q9NT22 766 aa17.17■□□□□ 0.34
SNCAIP-211ENST00000509023 MYH6P13533 1939 aa17.17■□□□□ 0.34
SNCAIP-211ENST00000509023 BAZ2BQ9UIF8 2168 aaKnown RBP17.17■□□□□ 0.34
SNCAIP-211ENST00000509023 VPS37CA5D8V6 355 aaPredicted RBP17.17■□□□□ 0.34
SNCAIP-211ENST00000509023 SPDYE5A6NIY4 337 aa17.17■□□□□ 0.34
SNCAIP-211ENST00000509023 C19orf81C9J6K1 198 aa17.17■□□□□ 0.34
SNCAIP-211ENST00000509023 HMGCS2P54868 508 aa17.17■□□□□ 0.34
SNCAIP-211ENST00000509023 NUCB2P80303 420 aa17.17■□□□□ 0.34
SNCAIP-211ENST00000509023 PKN1Q16512 942 aa17.17■□□□□ 0.34
SNCAIP-211ENST00000509023 CST9Q5W186 159 aa17.17■□□□□ 0.34
SNCAIP-211ENST00000509023 RBM27Q9P2N5 1060 aaKnown RBP17.17■□□□□ 0.34
SNCAIP-211ENST00000509023 TRPM7Q96QT4 1865 aa17.16■□□□□ 0.34
SNCAIP-211ENST00000509023 UNCXA6NJT0 531 aa17.16■□□□□ 0.34
SNCAIP-211ENST00000509023 WDR46O15213 610 aaKnown RBP17.16■□□□□ 0.34
SNCAIP-211ENST00000509023 STAT2P52630 851 aa17.16■□□□□ 0.34
SNCAIP-211ENST00000509023 IKQ13123 557 aaPredicted RBP17.16■□□□□ 0.34
SNCAIP-211ENST00000509023 HOMER1Q86YM7 354 aa17.16■□□□□ 0.34
SNCAIP-211ENST00000509023 ADGRF4Q8IZF3 695 aa17.16■□□□□ 0.34
SNCAIP-211ENST00000509023 OPTNQ96CV9 577 aa17.16■□□□□ 0.34
SNCAIP-211ENST00000509023 C8orf76Q96K31 380 aa17.16■□□□□ 0.34
SNCAIP-211ENST00000509023 VCAM1P19320 739 aa17.15■□□□□ 0.34
SNCAIP-211ENST00000509023 RBM46Q8TBY0 533 aaKnown RBP17.15■□□□□ 0.34
SNCAIP-211ENST00000509023 RRP36Q96EU6 259 aaKnown RBP17.15■□□□□ 0.34
SNCAIP-211ENST00000509023 PIGSQ96S52 555 aa17.15■□□□□ 0.34
SNCAIP-211ENST00000509023 GJB4Q9NTQ9 266 aa17.15■□□□□ 0.34
SNCAIP-211ENST00000509023 ZDHHC9Q9Y397 364 aa17.15■□□□□ 0.34
SNCAIP-211ENST00000509023 H3BQV1 296 aa17.15■□□□□ 0.34
SNCAIP-211ENST00000509023 IRF6O14896 467 aa17.15■□□□□ 0.34
SNCAIP-211ENST00000509023 BRD1O95696 1058 aa17.15■□□□□ 0.34
SNCAIP-211ENST00000509023 SCG2P13521 617 aa17.15■□□□□ 0.34
SNCAIP-211ENST00000509023 YY1P25490 414 aa17.15■□□□□ 0.34
SNCAIP-211ENST00000509023 PFKFB3Q16875 520 aaPredicted RBP17.15■□□□□ 0.34
SNCAIP-211ENST00000509023 IFFO2Q5TF58 517 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms