RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 INSRRP14616 1297 aa4.34□□□□□ -1.71
DEPDC1B-204ENST00000509006 PDE4BQ07343 736 aa4.34□□□□□ -1.71
DEPDC1B-204ENST00000509006 PUM1Q14671 1186 aaKnown RBP eCLIP4.34□□□□□ -1.71
DEPDC1B-204ENST00000509006 SPATS1Q496A3 300 aa4.34□□□□□ -1.71
DEPDC1B-204ENST00000509006 CNKSR3Q6P9H4 555 aa4.34□□□□□ -1.71
DEPDC1B-204ENST00000509006 PHC3Q8NDX5 983 aa4.34□□□□□ -1.71
DEPDC1B-204ENST00000509006 FAM13CQ8NE31 585 aa4.34□□□□□ -1.71
DEPDC1B-204ENST00000509006 NOC4LQ9BVI4 516 aaKnown RBP4.34□□□□□ -1.71
DEPDC1B-204ENST00000509006 LUC7LQ9NQ29 371 aaKnown RBP4.34□□□□□ -1.71
DEPDC1B-204ENST00000509006 TIMELESSQ9UNS1 1208 aa4.34□□□□□ -1.71
DEPDC1B-204ENST00000509006 ZNF281Q9Y2X9 895 aa4.34□□□□□ -1.71
DEPDC1B-204ENST00000509006 PRR36Q9H6K5 1346 aa4.33□□□□□ -1.72
DEPDC1B-204ENST00000509006 RBM47A0AV96 593 aaKnown RBP4.33□□□□□ -1.72
DEPDC1B-204ENST00000509006 FAM221AA4D161 298 aa4.33□□□□□ -1.72
DEPDC1B-204ENST00000509006 CILPO75339 1184 aa4.33□□□□□ -1.72
DEPDC1B-204ENST00000509006 CTSHP09668 335 aa4.33□□□□□ -1.72
DEPDC1B-204ENST00000509006 RPL10P27635 214 aaKnown RBP4.33□□□□□ -1.72
DEPDC1B-204ENST00000509006 ST13P50502 369 aaKnown RBP4.33□□□□□ -1.72
DEPDC1B-204ENST00000509006 PLP2Q04941 152 aa4.33□□□□□ -1.72
DEPDC1B-204ENST00000509006 TMEM201Q5SNT2 666 aa4.33□□□□□ -1.72
DEPDC1B-204ENST00000509006 CEP128Q6ZU80 1094 aa4.33□□□□□ -1.72
DEPDC1B-204ENST00000509006 CCDC84Q86UT8 332 aaPredicted RBP4.33□□□□□ -1.72
DEPDC1B-204ENST00000509006 FAM129CQ86XR2 697 aa4.33□□□□□ -1.72
DEPDC1B-204ENST00000509006 SLFN12Q8IYM2 578 aa4.33□□□□□ -1.72
DEPDC1B-204ENST00000509006 MZB1Q8WU39 189 aa4.33□□□□□ -1.72
DEPDC1B-204ENST00000509006 TRAIPQ9BWF2 469 aa4.33□□□□□ -1.72
DEPDC1B-204ENST00000509006 USP31Q70CQ4 1352 aa4.32□□□□□ -1.72
DEPDC1B-204ENST00000509006 ANKRD33BA6NCL7 494 aa4.32□□□□□ -1.72
DEPDC1B-204ENST00000509006 NRDCO43847 1150 aa4.32□□□□□ -1.72
DEPDC1B-204ENST00000509006 PRICKLE3O43900 615 aaPredicted RBP4.32□□□□□ -1.72
DEPDC1B-204ENST00000509006 RLBP1P12271 317 aa4.32□□□□□ -1.72
DEPDC1B-204ENST00000509006 YBX1P67809 324 aaKnown RBP4.32□□□□□ -1.72
DEPDC1B-204ENST00000509006 DAB2P98082 770 aa4.32□□□□□ -1.72
DEPDC1B-204ENST00000509006 RTP5Q14D33 572 aa4.32□□□□□ -1.72
DEPDC1B-204ENST00000509006 TAF1CQ15572 869 aaPredicted RBP4.32□□□□□ -1.72
DEPDC1B-204ENST00000509006 CLEC16AQ2KHT3 1053 aa4.32□□□□□ -1.72
DEPDC1B-204ENST00000509006 EAPPQ56P03 285 aaPredicted RBP4.32□□□□□ -1.72
DEPDC1B-204ENST00000509006 BNC2Q6ZN30 1099 aaPredicted RBP4.32□□□□□ -1.72
DEPDC1B-204ENST00000509006 WAPLQ7Z5K2 1190 aa4.32□□□□□ -1.72
DEPDC1B-204ENST00000509006 FRMD5Q7Z6J6 570 aa4.32□□□□□ -1.72
DEPDC1B-204ENST00000509006 IGDCC3Q8IVU1 814 aa4.32□□□□□ -1.72
DEPDC1B-204ENST00000509006 HOMEZQ8IX15 550 aa4.32□□□□□ -1.72
DEPDC1B-204ENST00000509006 TP53I13Q8NBR0 393 aaPredicted RBP4.32□□□□□ -1.72
DEPDC1B-204ENST00000509006 MAP6Q96JE9 813 aa4.32□□□□□ -1.72
DEPDC1B-204ENST00000509006 KREMEN1Q96MU8 473 aa4.32□□□□□ -1.72
DEPDC1B-204ENST00000509006 PLCD4Q9BRC7 762 aa4.32□□□□□ -1.72
DEPDC1B-204ENST00000509006 CRTAC1Q9NQ79 661 aa4.32□□□□□ -1.72
DEPDC1B-204ENST00000509006 PARP2Q9UGN5 583 aa4.32□□□□□ -1.72
DEPDC1B-204ENST00000509006 ZMYM5Q9UJ78 669 aa4.32□□□□□ -1.72
DEPDC1B-204ENST00000509006 PLCG1P19174 1290 aa4.31□□□□□ -1.72
DEPDC1B-204ENST00000509006 TNNI2P48788 182 aa4.31□□□□□ -1.72
DEPDC1B-204ENST00000509006 KIR3DS1Q14943 382 aa4.31□□□□□ -1.72
DEPDC1B-204ENST00000509006 SLC14A2Q15849 920 aa4.31□□□□□ -1.72
DEPDC1B-204ENST00000509006 HHIPL2Q6UWX4 724 aa4.31□□□□□ -1.72
DEPDC1B-204ENST00000509006 LINC01356Q8N9X3 169 aa4.31□□□□□ -1.72
DEPDC1B-204ENST00000509006 JARID2Q92833 1246 aaPredicted RBP4.31□□□□□ -1.72
DEPDC1B-204ENST00000509006 RHOVQ96L33 236 aa4.31□□□□□ -1.72
DEPDC1B-204ENST00000509006 PWWP2AQ96N64 755 aa4.31□□□□□ -1.72
DEPDC1B-204ENST00000509006 FOXP3Q9BZS1 431 aa4.31□□□□□ -1.72
DEPDC1B-204ENST00000509006 F13A1P00488 732 aa4.3□□□□□ -1.72
DEPDC1B-204ENST00000509006 YARSP54577 528 aaKnown RBP4.3□□□□□ -1.72
DEPDC1B-204ENST00000509006 NCKAP1LP55160 1127 aa4.3□□□□□ -1.72
DEPDC1B-204ENST00000509006 LMNB2Q03252 620 aa4.3□□□□□ -1.72
DEPDC1B-204ENST00000509006 ZPBP2Q6X784 338 aa4.3□□□□□ -1.72
DEPDC1B-204ENST00000509006 DNAJC14Q6Y2X3 702 aaPredicted RBP4.3□□□□□ -1.72
DEPDC1B-204ENST00000509006 TMC6Q7Z403 805 aa4.3□□□□□ -1.72
DEPDC1B-204ENST00000509006 GATAD2BQ8WXI9 593 aa4.3□□□□□ -1.72
DEPDC1B-204ENST00000509006 VWCEQ96DN2 955 aa4.3□□□□□ -1.72
DEPDC1B-204ENST00000509006 HHIPL1Q96JK4 782 aa4.3□□□□□ -1.72
DEPDC1B-204ENST00000509006 ASPNQ9BXN1 380 aa4.3□□□□□ -1.72
DEPDC1B-204ENST00000509006 HDAC8Q9BY41 377 aa4.3□□□□□ -1.72
DEPDC1B-204ENST00000509006 KLHL14Q9P2G3 628 aa4.3□□□□□ -1.72
DEPDC1B-204ENST00000509006 TMEM82A0PJX8 343 aa4.29□□□□□ -1.72
DEPDC1B-204ENST00000509006 PATL2C9JE40 543 aaKnown RBP4.29□□□□□ -1.72
DEPDC1B-204ENST00000509006 FFAR3O14843 346 aa4.29□□□□□ -1.72
DEPDC1B-204ENST00000509006 DNAJA2O60884 412 aa4.29□□□□□ -1.72
DEPDC1B-204ENST00000509006 PNLIPP16233 465 aa4.29□□□□□ -1.72
DEPDC1B-204ENST00000509006 KIR2DL1P43626 348 aaPredicted RBP4.29□□□□□ -1.72
DEPDC1B-204ENST00000509006 KIR2DL2P43627 348 aaPredicted RBP4.29□□□□□ -1.72
DEPDC1B-204ENST00000509006 ERVFRD-1P60508 538 aa4.29□□□□□ -1.72
DEPDC1B-204ENST00000509006 NMIQ13287 307 aaPredicted RBP4.29□□□□□ -1.72
DEPDC1B-204ENST00000509006 CAMK2GQ13555 558 aaPredicted RBP4.29□□□□□ -1.72
DEPDC1B-204ENST00000509006 OLFML2BQ68BL8 750 aa4.29□□□□□ -1.72
DEPDC1B-204ENST00000509006 RNF111Q6ZNA4 994 aa4.29□□□□□ -1.72
DEPDC1B-204ENST00000509006 SND1Q7KZF4 910 aaKnown RBP eCLIP4.29□□□□□ -1.72
DEPDC1B-204ENST00000509006 TMC4Q7Z404 712 aa4.29□□□□□ -1.72
DEPDC1B-204ENST00000509006 LDHDQ86WU2 507 aa4.29□□□□□ -1.72
DEPDC1B-204ENST00000509006 USHBP1Q8N6Y0 703 aa4.29□□□□□ -1.72
DEPDC1B-204ENST00000509006 REV1Q9UBZ9 1251 aa4.29□□□□□ -1.72
DEPDC1B-204ENST00000509006 POLR3KQ9Y2Y1 108 aaPredicted RBP4.29□□□□□ -1.72
DEPDC1B-204ENST00000509006 PCDHA5Q9Y5H7 936 aa4.29□□□□□ -1.72
DEPDC1B-204ENST00000509006 CHURC1-FNTBB4DL54 471 aa4.28□□□□□ -1.72
DEPDC1B-204ENST00000509006 F6X3S4 739 aa4.28□□□□□ -1.72
DEPDC1B-204ENST00000509006 AKAP8O43823 692 aaKnown RBP4.28□□□□□ -1.72
DEPDC1B-204ENST00000509006 FKTNO75072 461 aa4.28□□□□□ -1.72
DEPDC1B-204ENST00000509006 PF4P02776 101 aa4.28□□□□□ -1.72
DEPDC1B-204ENST00000509006 GARTP22102 1010 aa4.28□□□□□ -1.72
DEPDC1B-204ENST00000509006 PSMD2Q13200 908 aa4.28□□□□□ -1.72
DEPDC1B-204ENST00000509006 FBXO33Q7Z6M2 555 aa4.28□□□□□ -1.72
DEPDC1B-204ENST00000509006 CRELD1Q96HD1 420 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms